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The map label for this gene is yjcH [H]

Identifier: 154246373

GI number: 154246373

Start: 2719666

End: 2719974

Strand: Reverse

Name: yjcH [H]

Synonym: Xaut_2432

Alternate gene names: 154246373

Gene position: 2719974-2719666 (Counterclockwise)

Preceding gene: 154246374

Following gene: 154246372

Centisome position: 51.23

GC content: 59.55

Gene sequence:

>309_bases
ATGGACGCATCTCTGGCCGCCCGCATTGCGGCCGACCCCAATTACCAGAAGCTGAAGGCGACGCGCTCGCGCTTCGGCTG
GACTCTCACTTTAGCGATGCTGGTCGTTTACTACGGCTTCATCCTGCTTATTGCCTTCGACAAGGCCGTTCTTGCCGCGC
GTATCGGCTCGGGCGTGATGACATGGGGTATTCCCATCGGCTTCGGCGTGATCGTCTTCACGATCCTCATCACCGCCGTC
TACGTCCGCCGCGCGAACAGCGAGTTCGACGACCTTTCCGAGAAGATCAAGCAGCAGGTGCTCAAGTGA

Upstream 100 bases:

>100_bases
CCAGATTGCAGGCGCGACGTGTGGCCCGCTCAAGCCCGGCGTCGTCCACGATAACAATCAGGTCCGCGGCATATCCGTGG
ACCCAAAGGGAGGGGCTCCG

Downstream 100 bases:

>100_bases
TGTCGACGCATGCTTTCATCGGCAAGGCGGCGCGCCTTGCGGGCCTCGCCGCCCTTGCGCTTGTCCCCACGGCGGCCTTC
GCGGCCGAGGCCATCGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MDASLAARIAADPNYQKLKATRSRFGWTLTLAMLVVYYGFILLIAFDKAVLAARIGSGVMTWGIPIGFGVIVFTILITAV
YVRRANSEFDDLSEKIKQQVLK

Sequences:

>Translated_102_residues
MDASLAARIAADPNYQKLKATRSRFGWTLTLAMLVVYYGFILLIAFDKAVLAARIGSGVMTWGIPIGFGVIVFTILITAV
YVRRANSEFDDLSEKIKQQVLK
>Mature_102_residues
MDASLAARIAADPNYQKLKATRSRFGWTLTLAMLVVYYGFILLIAFDKAVLAARIGSGVMTWGIPIGFGVIVFTILITAV
YVRRANSEFDDLSEKIKQQVLK

Specific function: Unknown

COG id: COG3162

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790504, Length=101, Percent_Identity=40.5940594059406, Blast_Score=80, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007436 [H]

Pfam domain/function: PF04341 DUF485 [H]

EC number: NA

Molecular weight: Translated: 11301; Mature: 11301

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDASLAARIAADPNYQKLKATRSRFGWTLTLAMLVVYYGFILLIAFDKAVLAARIGSGVM
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TWGIPIGFGVIVFTILITAVYVRRANSEFDDLSEKIKQQVLK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDASLAARIAADPNYQKLKATRSRFGWTLTLAMLVVYYGFILLIAFDKAVLAARIGSGVM
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TWGIPIGFGVIVFTILITAVYVRRANSEFDDLSEKIKQQVLK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]