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The map label for this gene is fucU [H]

Identifier: 154246358

GI number: 154246358

Start: 2698898

End: 2699341

Strand: Reverse

Name: fucU [H]

Synonym: Xaut_2417

Alternate gene names: 154246358

Gene position: 2699341-2698898 (Counterclockwise)

Preceding gene: 154246359

Following gene: 154246357

Centisome position: 50.85

GC content: 70.05

Gene sequence:

>444_bases
ATGCTCAAAGGCATCGACCCCTTGCTGGGCCCCGATCTGCTGGCCACCCTGCGCGCCATGGGCCACGGCGACGAGATCGC
CATCGTGGACGCCAATTATCCGGCTGAGGCCCACGCCAGGCGGCTGGTGCGCATGGACGGACACGATGCCCCGCGCCTCG
TCGATGCCGTGCTCTCGGTGATGCCGCTCGATACCGACGTGGCTGAGGCCGCCTTCCGGCCCTGCGCCTTCGGCGACTGC
GCGCGCGAGGAGAGCGTGTTTTCGGAGTTCGAGGCCGCCATCGCCGCCCGCGAGCCCGGCTTCAGCCTGGTGCCCATCGC
CGGCCCGAGCTTCTACGACCGGGTGCGCGCGGCCTATGCCATCGTCGCCAGCGGCGAGCGCCGGCTCTACGGCAACATCA
TCCTGCGCAAGGGCGTGATCCGACCGCAAGGGGACACGGCATGA

Upstream 100 bases:

>100_bases
CCGGCACCATGGGCCGCGCGGCGCGCGCCATCGGCGGTGCCGCCTTGCCTTTGCTCGACACCTTCGGCCGCGACCTCGAC
GTTCTGTTCAAGGACTGACC

Downstream 100 bases:

>100_bases
TCCTGGTCTGCGGCGAAGCCCTCATCGACCTGCTGGTGGGCGCCCCCGAGGGCAACGAGATGCCGGCCCGCGCGGTGGCC
GGCGGCTCCCCCTTCAACGT

Product: RbsD or FucU transport

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLKGIDPLLGPDLLATLRAMGHGDEIAIVDANYPAEAHARRLVRMDGHDAPRLVDAVLSVMPLDTDVAEAAFRPCAFGDC
AREESVFSEFEAAIAAREPGFSLVPIAGPSFYDRVRAAYAIVASGERRLYGNIILRKGVIRPQGDTA

Sequences:

>Translated_147_residues
MLKGIDPLLGPDLLATLRAMGHGDEIAIVDANYPAEAHARRLVRMDGHDAPRLVDAVLSVMPLDTDVAEAAFRPCAFGDC
AREESVFSEFEAAIAAREPGFSLVPIAGPSFYDRVRAAYAIVASGERRLYGNIILRKGVIRPQGDTA
>Mature_147_residues
MLKGIDPLLGPDLLATLRAMGHGDEIAIVDANYPAEAHARRLVRMDGHDAPRLVDAVLSVMPLDTDVAEAAFRPCAFGDC
AREESVFSEFEAAIAAREPGFSLVPIAGPSFYDRVRAAYAIVASGERRLYGNIILRKGVIRPQGDTA

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=145, Percent_Identity=42.0689655172414, Blast_Score=101, Evalue=3e-22,
Organism=Homo sapiens, GI148596951, Length=130, Percent_Identity=38.4615384615385, Blast_Score=78, Evalue=3e-15,
Organism=Escherichia coli, GI1789169, Length=139, Percent_Identity=38.1294964028777, Blast_Score=94, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 15806; Mature: 15806

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGIDPLLGPDLLATLRAMGHGDEIAIVDANYPAEAHARRLVRMDGHDAPRLVDAVLSV
CCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
MPLDTDVAEAAFRPCAFGDCAREESVFSEFEAAIAAREPGFSLVPIAGPSFYDRVRAAYA
CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH
IVASGERRLYGNIILRKGVIRPQGDTA
HHCCCCCEEHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLKGIDPLLGPDLLATLRAMGHGDEIAIVDANYPAEAHARRLVRMDGHDAPRLVDAVLSV
CCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
MPLDTDVAEAAFRPCAFGDCAREESVFSEFEAAIAAREPGFSLVPIAGPSFYDRVRAAYA
CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH
IVASGERRLYGNIILRKGVIRPQGDTA
HHCCCCCEEHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA