Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is yegS [C]

Identifier: 154246347

GI number: 154246347

Start: 2685224

End: 2686147

Strand: Reverse

Name: yegS [C]

Synonym: Xaut_2406

Alternate gene names: 154246347

Gene position: 2686147-2685224 (Counterclockwise)

Preceding gene: 154246351

Following gene: 154246345

Centisome position: 50.6

GC content: 72.84

Gene sequence:

>924_bases
ATGGGGCGGATGCGGGTCGTACTCAATGCCAAGGCCGGGACCATCCACGATATGGGGCCGGAGCGGGTCCGCACCATCGT
GGACGAGGCCCTGACGCGGCCGGGCACGAACGTGGACGTGGTGGTGGCCCAGGGCGAGGCCATGGCCCGCGCCATCTCCT
CCGCCGAGCGCGACGGCTTTGACACGGTGGTGGTGGGCGCCGGCGACGGCACGGTCTCCTATGCCGCCTCCGTGTTCGCC
AACACCGAGGTCACCCTCGGCGTGCTGCCGCTCGGCACCATGAACATGCTGGCCTACGACATCGGCCTGCCCCGCGACCT
GGCGGGCGCCCTCGATGCCCTGCAGAAGGCGCGGCCCATGCAGGTGGACGTGGGCCTCTTGAACGGGCGGGCCTTCCACG
GGGTGTCGGGGGTGGGCTTCTTCAGCCAGATGGCGCTGGCCCGCGAGCAGTTGCGCGCCCAGCGCGGGCGGGTGCTGGGC
TGGTTCATGGCGCTGGGCAAGGCGGTGGCACGCTCCGGGCGCATGTCCATCGAGGTGGAGGTGGCCGGCGTGCGCGAGCC
CATCGAGGCCTATGCGGCGCTGGTGACGGTGAACGCCTTCGACGCCCCCGGCTGGCACCGCTCGCGGCTCGACGGCGGGC
TTCTGGAGGTGCTGGTGGCGGAGGACCGCGGCACCCTGGCGCGGCTGAAGACCGGCGCGGAGGTGCTGGTGAATGCCTGG
CGCGACAAGCCCGGCATCCATGCCTTCCAGGCCCGGCGCGTCACCATCCATGCCCGGCGCGAGCGCGCCTGGGTGGCCAC
CGACGGGGAAGTGGAGCGCGAGCGGGTGCCGCTCCGCTACGCCATTGCCCCCGGCGCGTTGAAGCTGCTGGTGCCGCCCG
CCGCCATCCAGTGGCGCGAGCACGACGCCCAGGCGGTGACGTGA

Upstream 100 bases:

>100_bases
CCCGTTCTCAGACCAGCTTGCAATGCCGGCCGAGCGGCGCGTGCTCTGACGGGAACCTTAAGGCCGCGCCGGCGCTTGTG
CCGGTCTGGAGGATGCCACG

Downstream 100 bases:

>100_bases
GCGGATCGGCCGGGCCTTTGGCTAGGCTCGCGCGGCGCCTGAGCGACACCCTCTCGGCACCGGTCAAAGACCGGGGCCGT
TGGTATCAGTTCGAGCCGTC

Product: diacylglycerol kinase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MGRMRVVLNAKAGTIHDMGPERVRTIVDEALTRPGTNVDVVVAQGEAMARAISSAERDGFDTVVVGAGDGTVSYAASVFA
NTEVTLGVLPLGTMNMLAYDIGLPRDLAGALDALQKARPMQVDVGLLNGRAFHGVSGVGFFSQMALAREQLRAQRGRVLG
WFMALGKAVARSGRMSIEVEVAGVREPIEAYAALVTVNAFDAPGWHRSRLDGGLLEVLVAEDRGTLARLKTGAEVLVNAW
RDKPGIHAFQARRVTIHARRERAWVATDGEVERERVPLRYAIAPGALKLLVPPAAIQWREHDAQAVT

Sequences:

>Translated_307_residues
MGRMRVVLNAKAGTIHDMGPERVRTIVDEALTRPGTNVDVVVAQGEAMARAISSAERDGFDTVVVGAGDGTVSYAASVFA
NTEVTLGVLPLGTMNMLAYDIGLPRDLAGALDALQKARPMQVDVGLLNGRAFHGVSGVGFFSQMALAREQLRAQRGRVLG
WFMALGKAVARSGRMSIEVEVAGVREPIEAYAALVTVNAFDAPGWHRSRLDGGLLEVLVAEDRGTLARLKTGAEVLVNAW
RDKPGIHAFQARRVTIHARRERAWVATDGEVERERVPLRYAIAPGALKLLVPPAAIQWREHDAQAVT
>Mature_306_residues
GRMRVVLNAKAGTIHDMGPERVRTIVDEALTRPGTNVDVVVAQGEAMARAISSAERDGFDTVVVGAGDGTVSYAASVFAN
TEVTLGVLPLGTMNMLAYDIGLPRDLAGALDALQKARPMQVDVGLLNGRAFHGVSGVGFFSQMALAREQLRAQRGRVLGW
FMALGKAVARSGRMSIEVEVAGVREPIEAYAALVTVNAFDAPGWHRSRLDGGLLEVLVAEDRGTLARLKTGAEVLVNAWR
DKPGIHAFQARRVTIHARRERAWVATDGEVERERVPLRYAIAPGALKLLVPPAAIQWREHDAQAVT

Specific function: Unknown

COG id: COG1597

COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DAGKc domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001206
- InterPro:   IPR004363
- InterPro:   IPR018148
- InterPro:   IPR011607 [H]

Pfam domain/function: PF00781 DAGK_cat; PF02142 MGS [H]

EC number: NA

Molecular weight: Translated: 33015; Mature: 32884

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRMRVVLNAKAGTIHDMGPERVRTIVDEALTRPGTNVDVVVAQGEAMARAISSAERDGF
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCC
DTVVVGAGDGTVSYAASVFANTEVTLGVLPLGTMNMLAYDIGLPRDLAGALDALQKARPM
CEEEEECCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC
QVDVGLLNGRAFHGVSGVGFFSQMALAREQLRAQRGRVLGWFMALGKAVARSGRMSIEVE
EEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEE
VAGVREPIEAYAALVTVNAFDAPGWHRSRLDGGLLEVLVAEDRGTLARLKTGAEVLVNAW
ECCCCHHHHHHEEEEEEECCCCCCCCHHHCCCCEEEEEEECCCCCCHHHHCCHHHHHHHH
RDKPGIHAFQARRVTIHARRERAWVATDGEVERERVPLRYAIAPGALKLLVPPAAIQWRE
CCCCCCEEEEEEEEEEEEECCEEEEECCCCCHHHCCCEEEEECCCEEEEEECCCCEEECC
HDAQAVT
CCCCCCC
>Mature Secondary Structure 
GRMRVVLNAKAGTIHDMGPERVRTIVDEALTRPGTNVDVVVAQGEAMARAISSAERDGF
CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCC
DTVVVGAGDGTVSYAASVFANTEVTLGVLPLGTMNMLAYDIGLPRDLAGALDALQKARPM
CEEEEECCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC
QVDVGLLNGRAFHGVSGVGFFSQMALAREQLRAQRGRVLGWFMALGKAVARSGRMSIEVE
EEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEE
VAGVREPIEAYAALVTVNAFDAPGWHRSRLDGGLLEVLVAEDRGTLARLKTGAEVLVNAW
ECCCCHHHHHHEEEEEEECCCCCCCCHHHCCCCEEEEEEECCCCCCHHHHCCHHHHHHHH
RDKPGIHAFQARRVTIHARRERAWVATDGEVERERVPLRYAIAPGALKLLVPPAAIQWRE
CCCCCCEEEEEEEEEEEEECCEEEEECCCCCHHHCCCEEEEECCCEEEEEECCCCEEECC
HDAQAVT
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]