Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is yegS [C]
Identifier: 154246347
GI number: 154246347
Start: 2685224
End: 2686147
Strand: Reverse
Name: yegS [C]
Synonym: Xaut_2406
Alternate gene names: 154246347
Gene position: 2686147-2685224 (Counterclockwise)
Preceding gene: 154246351
Following gene: 154246345
Centisome position: 50.6
GC content: 72.84
Gene sequence:
>924_bases ATGGGGCGGATGCGGGTCGTACTCAATGCCAAGGCCGGGACCATCCACGATATGGGGCCGGAGCGGGTCCGCACCATCGT GGACGAGGCCCTGACGCGGCCGGGCACGAACGTGGACGTGGTGGTGGCCCAGGGCGAGGCCATGGCCCGCGCCATCTCCT CCGCCGAGCGCGACGGCTTTGACACGGTGGTGGTGGGCGCCGGCGACGGCACGGTCTCCTATGCCGCCTCCGTGTTCGCC AACACCGAGGTCACCCTCGGCGTGCTGCCGCTCGGCACCATGAACATGCTGGCCTACGACATCGGCCTGCCCCGCGACCT GGCGGGCGCCCTCGATGCCCTGCAGAAGGCGCGGCCCATGCAGGTGGACGTGGGCCTCTTGAACGGGCGGGCCTTCCACG GGGTGTCGGGGGTGGGCTTCTTCAGCCAGATGGCGCTGGCCCGCGAGCAGTTGCGCGCCCAGCGCGGGCGGGTGCTGGGC TGGTTCATGGCGCTGGGCAAGGCGGTGGCACGCTCCGGGCGCATGTCCATCGAGGTGGAGGTGGCCGGCGTGCGCGAGCC CATCGAGGCCTATGCGGCGCTGGTGACGGTGAACGCCTTCGACGCCCCCGGCTGGCACCGCTCGCGGCTCGACGGCGGGC TTCTGGAGGTGCTGGTGGCGGAGGACCGCGGCACCCTGGCGCGGCTGAAGACCGGCGCGGAGGTGCTGGTGAATGCCTGG CGCGACAAGCCCGGCATCCATGCCTTCCAGGCCCGGCGCGTCACCATCCATGCCCGGCGCGAGCGCGCCTGGGTGGCCAC CGACGGGGAAGTGGAGCGCGAGCGGGTGCCGCTCCGCTACGCCATTGCCCCCGGCGCGTTGAAGCTGCTGGTGCCGCCCG CCGCCATCCAGTGGCGCGAGCACGACGCCCAGGCGGTGACGTGA
Upstream 100 bases:
>100_bases CCCGTTCTCAGACCAGCTTGCAATGCCGGCCGAGCGGCGCGTGCTCTGACGGGAACCTTAAGGCCGCGCCGGCGCTTGTG CCGGTCTGGAGGATGCCACG
Downstream 100 bases:
>100_bases GCGGATCGGCCGGGCCTTTGGCTAGGCTCGCGCGGCGCCTGAGCGACACCCTCTCGGCACCGGTCAAAGACCGGGGCCGT TGGTATCAGTTCGAGCCGTC
Product: diacylglycerol kinase catalytic subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MGRMRVVLNAKAGTIHDMGPERVRTIVDEALTRPGTNVDVVVAQGEAMARAISSAERDGFDTVVVGAGDGTVSYAASVFA NTEVTLGVLPLGTMNMLAYDIGLPRDLAGALDALQKARPMQVDVGLLNGRAFHGVSGVGFFSQMALAREQLRAQRGRVLG WFMALGKAVARSGRMSIEVEVAGVREPIEAYAALVTVNAFDAPGWHRSRLDGGLLEVLVAEDRGTLARLKTGAEVLVNAW RDKPGIHAFQARRVTIHARRERAWVATDGEVERERVPLRYAIAPGALKLLVPPAAIQWREHDAQAVT
Sequences:
>Translated_307_residues MGRMRVVLNAKAGTIHDMGPERVRTIVDEALTRPGTNVDVVVAQGEAMARAISSAERDGFDTVVVGAGDGTVSYAASVFA NTEVTLGVLPLGTMNMLAYDIGLPRDLAGALDALQKARPMQVDVGLLNGRAFHGVSGVGFFSQMALAREQLRAQRGRVLG WFMALGKAVARSGRMSIEVEVAGVREPIEAYAALVTVNAFDAPGWHRSRLDGGLLEVLVAEDRGTLARLKTGAEVLVNAW RDKPGIHAFQARRVTIHARRERAWVATDGEVERERVPLRYAIAPGALKLLVPPAAIQWREHDAQAVT >Mature_306_residues GRMRVVLNAKAGTIHDMGPERVRTIVDEALTRPGTNVDVVVAQGEAMARAISSAERDGFDTVVVGAGDGTVSYAASVFAN TEVTLGVLPLGTMNMLAYDIGLPRDLAGALDALQKARPMQVDVGLLNGRAFHGVSGVGFFSQMALAREQLRAQRGRVLGW FMALGKAVARSGRMSIEVEVAGVREPIEAYAALVTVNAFDAPGWHRSRLDGGLLEVLVAEDRGTLARLKTGAEVLVNAWR DKPGIHAFQARRVTIHARRERAWVATDGEVERERVPLRYAIAPGALKLLVPPAAIQWREHDAQAVT
Specific function: Unknown
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001206 - InterPro: IPR004363 - InterPro: IPR018148 - InterPro: IPR011607 [H]
Pfam domain/function: PF00781 DAGK_cat; PF02142 MGS [H]
EC number: NA
Molecular weight: Translated: 33015; Mature: 32884
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRMRVVLNAKAGTIHDMGPERVRTIVDEALTRPGTNVDVVVAQGEAMARAISSAERDGF CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCC DTVVVGAGDGTVSYAASVFANTEVTLGVLPLGTMNMLAYDIGLPRDLAGALDALQKARPM CEEEEECCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC QVDVGLLNGRAFHGVSGVGFFSQMALAREQLRAQRGRVLGWFMALGKAVARSGRMSIEVE EEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEE VAGVREPIEAYAALVTVNAFDAPGWHRSRLDGGLLEVLVAEDRGTLARLKTGAEVLVNAW ECCCCHHHHHHEEEEEEECCCCCCCCHHHCCCCEEEEEEECCCCCCHHHHCCHHHHHHHH RDKPGIHAFQARRVTIHARRERAWVATDGEVERERVPLRYAIAPGALKLLVPPAAIQWRE CCCCCCEEEEEEEEEEEEECCEEEEECCCCCHHHCCCEEEEECCCEEEEEECCCCEEECC HDAQAVT CCCCCCC >Mature Secondary Structure GRMRVVLNAKAGTIHDMGPERVRTIVDEALTRPGTNVDVVVAQGEAMARAISSAERDGF CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCC DTVVVGAGDGTVSYAASVFANTEVTLGVLPLGTMNMLAYDIGLPRDLAGALDALQKARPM CEEEEECCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC QVDVGLLNGRAFHGVSGVGFFSQMALAREQLRAQRGRVLGWFMALGKAVARSGRMSIEVE EEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEE VAGVREPIEAYAALVTVNAFDAPGWHRSRLDGGLLEVLVAEDRGTLARLKTGAEVLVNAW ECCCCHHHHHHEEEEEEECCCCCCCCHHHCCCCEEEEEEECCCCCCHHHHCCHHHHHHHH RDKPGIHAFQARRVTIHARRERAWVATDGEVERERVPLRYAIAPGALKLLVPPAAIQWRE CCCCCCEEEEEEEEEEEEECCEEEEECCCCCHHHCCCEEEEECCCEEEEEECCCCEEECC HDAQAVT CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]