Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is 154246327

Identifier: 154246327

GI number: 154246327

Start: 2664627

End: 2664839

Strand: Direct

Name: 154246327

Synonym: Xaut_2385

Alternate gene names: NA

Gene position: 2664627-2664839 (Clockwise)

Preceding gene: 154246326

Following gene: 154246329

Centisome position: 50.19

GC content: 68.08

Gene sequence:

>213_bases
GTGCCGGTCTCCGACCTGTGCCGCAAGTACGGGGTCAGCGATGCCCGCATCTACAAGTGGAAGGCCCGGTTCGGCGGCAT
GGAGGTGTCGGAAGCCAAGAGGCTGCGGGCGCTGGAGGACGAGAACGCCAAGCTGAAGCGCATGCTGGCCGATCGTCACC
CGGCGCAGCGGCCCCACCGTGAGCGCGATGCTGCGCGATCCGCGGGTACGTAA

Upstream 100 bases:

>100_bases
CTTGAAGTTCGTTCTGGCCCATTGCGAGGACCAGACCATGAGGCATAGCCGGTTCACGGAAGAGTAGATCATCGCCATCC
TGAAGGAGCACGAGGCCGGT

Downstream 100 bases:

>100_bases
GGTGAGCTTCACTGGCTCCACCGAAGTTGGGCGCATCCTCCTGAAGGAGGCGGCCGATGGTATCCGGAACGCCTCCATGG
AACTGGGCGGCAATGCGCCA

Product: transposase IS3/IS911 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MPVSDLCRKYGVSDARIYKWKARFGGMEVSEAKRLRALEDENAKLKRMLADRHPAQRPHRERDAARSAGT

Sequences:

>Translated_70_residues
MPVSDLCRKYGVSDARIYKWKARFGGMEVSEAKRLRALEDENAKLKRMLADRHPAQRPHRERDAARSAGT
>Mature_69_residues
PVSDLCRKYGVSDARIYKWKARFGGMEVSEAKRLRALEDENAKLKRMLADRHPAQRPHRERDAARSAGT

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 8055; Mature: 7924

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVSDLCRKYGVSDARIYKWKARFGGMEVSEAKRLRALEDENAKLKRMLADRHPAQRPHR
CCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCH
ERDAARSAGT
HHHHHHCCCC
>Mature Secondary Structure 
PVSDLCRKYGVSDARIYKWKARFGGMEVSEAKRLRALEDENAKLKRMLADRHPAQRPHR
CHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCH
ERDAARSAGT
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2544911 [H]