Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154246327
Identifier: 154246327
GI number: 154246327
Start: 2664627
End: 2664839
Strand: Direct
Name: 154246327
Synonym: Xaut_2385
Alternate gene names: NA
Gene position: 2664627-2664839 (Clockwise)
Preceding gene: 154246326
Following gene: 154246329
Centisome position: 50.19
GC content: 68.08
Gene sequence:
>213_bases GTGCCGGTCTCCGACCTGTGCCGCAAGTACGGGGTCAGCGATGCCCGCATCTACAAGTGGAAGGCCCGGTTCGGCGGCAT GGAGGTGTCGGAAGCCAAGAGGCTGCGGGCGCTGGAGGACGAGAACGCCAAGCTGAAGCGCATGCTGGCCGATCGTCACC CGGCGCAGCGGCCCCACCGTGAGCGCGATGCTGCGCGATCCGCGGGTACGTAA
Upstream 100 bases:
>100_bases CTTGAAGTTCGTTCTGGCCCATTGCGAGGACCAGACCATGAGGCATAGCCGGTTCACGGAAGAGTAGATCATCGCCATCC TGAAGGAGCACGAGGCCGGT
Downstream 100 bases:
>100_bases GGTGAGCTTCACTGGCTCCACCGAAGTTGGGCGCATCCTCCTGAAGGAGGCGGCCGATGGTATCCGGAACGCCTCCATGG AACTGGGCGGCAATGCGCCA
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MPVSDLCRKYGVSDARIYKWKARFGGMEVSEAKRLRALEDENAKLKRMLADRHPAQRPHRERDAARSAGT
Sequences:
>Translated_70_residues MPVSDLCRKYGVSDARIYKWKARFGGMEVSEAKRLRALEDENAKLKRMLADRHPAQRPHRERDAARSAGT >Mature_69_residues PVSDLCRKYGVSDARIYKWKARFGGMEVSEAKRLRALEDENAKLKRMLADRHPAQRPHRERDAARSAGT
Specific function: Unknown
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 8055; Mature: 7924
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSDLCRKYGVSDARIYKWKARFGGMEVSEAKRLRALEDENAKLKRMLADRHPAQRPHR CCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCH ERDAARSAGT HHHHHHCCCC >Mature Secondary Structure PVSDLCRKYGVSDARIYKWKARFGGMEVSEAKRLRALEDENAKLKRMLADRHPAQRPHR CHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCH ERDAARSAGT HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2544911 [H]