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The map label for this gene is yoaB [C]

Identifier: 154246318

GI number: 154246318

Start: 2653435

End: 2653779

Strand: Reverse

Name: yoaB [C]

Synonym: Xaut_2376

Alternate gene names: 154246318

Gene position: 2653779-2653435 (Counterclockwise)

Preceding gene: 154246319

Following gene: 154246317

Centisome position: 49.99

GC content: 68.41

Gene sequence:

>345_bases
ATGAGCATCGAGAGGCTCGACAAGGGCCGCCGCATGAGCGAAGCCGTGATCCACGGCAACACCGTCTATCTCGCCGGCCA
GGTGGCCGAGGGGCCGGACGTGGAAAGCCAGACCAAGGCCGTCCTCGCCTCCATCGACGCCCTGCTGGCCCGCGCCGGCA
CCGACAAGTCGCGCATCCTCACCGCCACCATCTGGCTGTCGGACATCGCCAATTTCGCCGGCATGAACAGCGTGTGGGAC
GCCTGGGTCGACCAGGAGAACCCGCCGGCCCGCGCCACCAGCGAGGGCAAGCTCGCTGCCCCCAAGTTCCTGGTGGAAAT
CATCGTGGTCGCCGCCCGCGGCTGA

Upstream 100 bases:

>100_bases
CCCAGTCCGGACATCGACTTTCACGCCCGGCGCCGCGCCCGGTGGCACAGCCCCCCGCACATTTGCTAGACACCTGCCAT
CCAACCGAAAGGACCATCCC

Downstream 100 bases:

>100_bases
GCTTCAGCGTTCGACATCCTCCGGCGGCGCCCCGCGCGTCCGCCGGAGGGCCGCAGCCGCGTTGATCGGCGGACCGGCAC
GCCTTACGTTGAAGATCCAA

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSIERLDKGRRMSEAVIHGNTVYLAGQVAEGPDVESQTKAVLASIDALLARAGTDKSRILTATIWLSDIANFAGMNSVWD
AWVDQENPPARATSEGKLAAPKFLVEIIVVAARG

Sequences:

>Translated_114_residues
MSIERLDKGRRMSEAVIHGNTVYLAGQVAEGPDVESQTKAVLASIDALLARAGTDKSRILTATIWLSDIANFAGMNSVWD
AWVDQENPPARATSEGKLAAPKFLVEIIVVAARG
>Mature_113_residues
SIERLDKGRRMSEAVIHGNTVYLAGQVAEGPDVESQTKAVLASIDALLARAGTDKSRILTATIWLSDIANFAGMNSVWDA
WVDQENPPARATSEGKLAAPKFLVEIIVVAARG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=48.2456140350877, Blast_Score=99, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12192; Mature: 12061

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIERLDKGRRMSEAVIHGNTVYLAGQVAEGPDVESQTKAVLASIDALLARAGTDKSRIL
CCCHHHHCCCCHHHHEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEE
TATIWLSDIANFAGMNSVWDAWVDQENPPARATSEGKLAAPKFLVEIIVVAARG
EHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIERLDKGRRMSEAVIHGNTVYLAGQVAEGPDVESQTKAVLASIDALLARAGTDKSRIL
CCHHHHCCCCHHHHEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEE
TATIWLSDIANFAGMNSVWDAWVDQENPPARATSEGKLAAPKFLVEIIVVAARG
EHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]