Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is ygjG [C]
Identifier: 154246241
GI number: 154246241
Start: 2564991
End: 2566352
Strand: Direct
Name: ygjG [C]
Synonym: Xaut_2299
Alternate gene names: 154246241
Gene position: 2564991-2566352 (Clockwise)
Preceding gene: 154246238
Following gene: 154246247
Centisome position: 48.31
GC content: 67.11
Gene sequence:
>1362_bases ATGGCTCTGGACGATCTGGTTACCGAAGGCGCGGGCGTGGGTGCGGACGCGATTCCCAACGATCTCGACGCTTTCTGGAT GCCGTTCACCTCCAACCGTTCGTTCAAGAAGCGACCGCGGCTCGTCTCCCGGGCCAAGGACATGCACTATTACACTCCGG AAGGTCGCGCCATTCTCGACGGCTGCGCCGGGCTGTGGTGCGTCAATCCTGGCCATAACCGCGAGCCCATCGTGGAGGCC ATCCGCCAGGCCGCCACCGAGGTGGATTTCGCCCCCACCTTCCAGTACGGCCACCCCCAGGCGTTTCGCCTCGCCAGCCG CATCGCGGACCTCGCGCCGGGCGATCTCGACCACGTGTTCTTCTGCAATTCCGGCTCGGAGGCGGTGGACACCGCGCTGA AGATCGCGCTCGCCTACCACCAGACCACGGGCGCCGGCACCCGCACCCGCCTCATCGGCCGCGAGCGCGGCTATCACGGG GTGGGCTTCGGCGGCATCTCGGTGGGCGGCATCGTGTCGAATCGCCGGACCTTCGGCACCATGCTCACCGGCGTCGATCA CCTGCGCTCGACCTATGACCGGGAGCATCAGGCCTTCACCAAGGGTGAGCCGGACTACGGCGCGCACTTCGCCGATGAGC TGGAGCGCATCGTTGCCCTGCACGATGCCTCCACCATCGCCTCGGTGATCGTGGAGCCCATGGGCGGCTCCACCGGCGTG CTGCCCACGCCCAAGGGCTATCTCAAGCGGCTGCGCGAGATTTGCGACAAGTACGGCATCCTGCTCATCTTCGACGAGGT CATCACCGGCTTCGGCCGCCTCGGCCATGCTTTCGCCGCCGAGCGCTACGGTGTGGTGCCGGACATGATCACCTTCGCCA AGGGCATCACCGCGGGCGCCGTGCCCATGGGCGGCGTGCTGGTGCGCAAGGGCATCCATGATGCCTTCATGAAGGGACCG GAGCACGTGGTGGAGCTGTTCCACGGCTACACCTATTCGGCCCATCCCCTGGCCTGCGCGGCGGGTCTTGCCACCCTCGA CCTCTACGCCAGGGAGCACACCTTCACCCATGCCCGGGCGCTGGAGCCCTTCTTCGCCGACGCGATGATGAGCCTGAAGG ACAAGCCCGGCGTGCTCGACATCCGCACGGTGGGCATCACCGGCGCCGTGGACCTCGCCCCCAAGGAAGGCGCTCCGGGC CTGAAGGGCTACGAAGCGCTGGAGCGGGCCTTCCACGAGGAGGGCCTGATGATGCGCATCGCCGGCGACACGCTGGTGGT GACGCCGCCGCTCATCATCTCGAAGGATCAGGTGGGCGAGCTGGTGGAGAAGCTGGGCCGGGTCATCGAAAAGGTGGCCT GA
Upstream 100 bases:
>100_bases GCCACGCGCACTGCTAGCTTCCGCACCGACGCGGCCGAAGAATGGCAGCCGGAAGGCCCGATCCCGCCTGAAGCTGCCGC CGCGCGGGAGAGGTTTCATC
Downstream 100 bases:
>100_bases CGCCAGCAATGCGCCGGCGGATCCGCCGGCGCGTTGTCATCAAAGGCCTGCCATGCGCCGGGCTGGACCCGGTAAGTAAA GGCGGCAGGCCGGCATGGCC
Product: beta alanine--pyruvate transaminase
Products: NA
Alternate protein names: Omega-APT; Beta-alanine--pyruvate aminotransferase [H]
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MALDDLVTEGAGVGADAIPNDLDAFWMPFTSNRSFKKRPRLVSRAKDMHYYTPEGRAILDGCAGLWCVNPGHNREPIVEA IRQAATEVDFAPTFQYGHPQAFRLASRIADLAPGDLDHVFFCNSGSEAVDTALKIALAYHQTTGAGTRTRLIGRERGYHG VGFGGISVGGIVSNRRTFGTMLTGVDHLRSTYDREHQAFTKGEPDYGAHFADELERIVALHDASTIASVIVEPMGGSTGV LPTPKGYLKRLREICDKYGILLIFDEVITGFGRLGHAFAAERYGVVPDMITFAKGITAGAVPMGGVLVRKGIHDAFMKGP EHVVELFHGYTYSAHPLACAAGLATLDLYAREHTFTHARALEPFFADAMMSLKDKPGVLDIRTVGITGAVDLAPKEGAPG LKGYEALERAFHEEGLMMRIAGDTLVVTPPLIISKDQVGELVEKLGRVIEKVA
Sequences:
>Translated_453_residues MALDDLVTEGAGVGADAIPNDLDAFWMPFTSNRSFKKRPRLVSRAKDMHYYTPEGRAILDGCAGLWCVNPGHNREPIVEA IRQAATEVDFAPTFQYGHPQAFRLASRIADLAPGDLDHVFFCNSGSEAVDTALKIALAYHQTTGAGTRTRLIGRERGYHG VGFGGISVGGIVSNRRTFGTMLTGVDHLRSTYDREHQAFTKGEPDYGAHFADELERIVALHDASTIASVIVEPMGGSTGV LPTPKGYLKRLREICDKYGILLIFDEVITGFGRLGHAFAAERYGVVPDMITFAKGITAGAVPMGGVLVRKGIHDAFMKGP EHVVELFHGYTYSAHPLACAAGLATLDLYAREHTFTHARALEPFFADAMMSLKDKPGVLDIRTVGITGAVDLAPKEGAPG LKGYEALERAFHEEGLMMRIAGDTLVVTPPLIISKDQVGELVEKLGRVIEKVA >Mature_452_residues ALDDLVTEGAGVGADAIPNDLDAFWMPFTSNRSFKKRPRLVSRAKDMHYYTPEGRAILDGCAGLWCVNPGHNREPIVEAI RQAATEVDFAPTFQYGHPQAFRLASRIADLAPGDLDHVFFCNSGSEAVDTALKIALAYHQTTGAGTRTRLIGRERGYHGV GFGGISVGGIVSNRRTFGTMLTGVDHLRSTYDREHQAFTKGEPDYGAHFADELERIVALHDASTIASVIVEPMGGSTGVL PTPKGYLKRLREICDKYGILLIFDEVITGFGRLGHAFAAERYGVVPDMITFAKGITAGAVPMGGVLVRKGIHDAFMKGPE HVVELFHGYTYSAHPLACAAGLATLDLYAREHTFTHARALEPFFADAMMSLKDKPGVLDIRTVGITGAVDLAPKEGAPGL KGYEALERAFHEEGLMMRIAGDTLVVTPPLIISKDQVGELVEKLGRVIEKVA
Specific function: Catalyzes transamination between a variety of omega- amino acids, mono and diamines, and pyruvate. Plays a pivotal role in the metabolism of the omega amino acids [H]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI37574042, Length=438, Percent_Identity=26.2557077625571, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI226442705, Length=435, Percent_Identity=25.7471264367816, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI13994255, Length=443, Percent_Identity=27.5395033860045, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI24119277, Length=432, Percent_Identity=26.6203703703704, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI4557809, Length=421, Percent_Identity=25.6532066508314, Blast_Score=115, Evalue=8e-26, Organism=Homo sapiens, GI226442709, Length=373, Percent_Identity=26.8096514745308, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI284507298, Length=332, Percent_Identity=27.4096385542169, Blast_Score=103, Evalue=4e-22, Organism=Escherichia coli, GI145693181, Length=402, Percent_Identity=29.6019900497512, Blast_Score=162, Evalue=3e-41, Organism=Escherichia coli, GI1786991, Length=441, Percent_Identity=29.7052154195011, Blast_Score=158, Evalue=9e-40, Organism=Escherichia coli, GI1789016, Length=424, Percent_Identity=28.5377358490566, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1788044, Length=433, Percent_Identity=27.0207852193995, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI1789759, Length=409, Percent_Identity=28.361858190709, Blast_Score=139, Evalue=4e-34, Organism=Escherichia coli, GI1787560, Length=414, Percent_Identity=28.743961352657, Blast_Score=118, Evalue=6e-28, Organism=Escherichia coli, GI1786349, Length=358, Percent_Identity=27.0949720670391, Blast_Score=107, Evalue=1e-24, Organism=Caenorhabditis elegans, GI32564660, Length=447, Percent_Identity=27.9642058165548, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI71992977, Length=438, Percent_Identity=28.5388127853881, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI25144271, Length=421, Percent_Identity=25.6532066508314, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI25144274, Length=249, Percent_Identity=30.5220883534137, Blast_Score=99, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6323470, Length=433, Percent_Identity=25.635103926097, Blast_Score=140, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6324386, Length=477, Percent_Identity=24.1090146750524, Blast_Score=133, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6324432, Length=434, Percent_Identity=25.3456221198157, Blast_Score=108, Evalue=1e-24, Organism=Drosophila melanogaster, GI161085790, Length=434, Percent_Identity=26.7281105990783, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI28574759, Length=423, Percent_Identity=26.7139479905437, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI21357415, Length=418, Percent_Identity=24.1626794258373, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI21356575, Length=426, Percent_Identity=25.1173708920188, Blast_Score=95, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.18 [H]
Molecular weight: Translated: 48991; Mature: 48859
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDDLVTEGAGVGADAIPNDLDAFWMPFTSNRSFKKRPRLVSRAKDMHYYTPEGRAILD CCHHHHHHCCCCCCCCCCCCCCHHEECCCCCCCCHHHHHHHHHHHHHCEEECCCCCCHHH GCAGLWCVNPGHNREPIVEAIRQAATEVDFAPTFQYGHPQAFRLASRIADLAPGDLDHVF CCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEE FCNSGSEAVDTALKIALAYHQTTGAGTRTRLIGRERGYHGVGFGGISVGGIVSNRRTFGT EECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHH MLTGVDHLRSTYDREHQAFTKGEPDYGAHFADELERIVALHDASTIASVIVEPMGGSTGV HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LPTPKGYLKRLREICDKYGILLIFDEVITGFGRLGHAFAAERYGVVPDMITFAKGITAGA CCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC VPMGGVLVRKGIHDAFMKGPEHVVELFHGYTYSAHPLACAAGLATLDLYAREHTFTHARA CCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LEPFFADAMMSLKDKPGVLDIRTVGITGAVDLAPKEGAPGLKGYEALERAFHEEGLMMRI HHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEE AGDTLVVTPPLIISKDQVGELVEKLGRVIEKVA ECCEEEECCCCEECHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALDDLVTEGAGVGADAIPNDLDAFWMPFTSNRSFKKRPRLVSRAKDMHYYTPEGRAILD CHHHHHHCCCCCCCCCCCCCCHHEECCCCCCCCHHHHHHHHHHHHHCEEECCCCCCHHH GCAGLWCVNPGHNREPIVEAIRQAATEVDFAPTFQYGHPQAFRLASRIADLAPGDLDHVF CCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEE FCNSGSEAVDTALKIALAYHQTTGAGTRTRLIGRERGYHGVGFGGISVGGIVSNRRTFGT EECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHH MLTGVDHLRSTYDREHQAFTKGEPDYGAHFADELERIVALHDASTIASVIVEPMGGSTGV HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LPTPKGYLKRLREICDKYGILLIFDEVITGFGRLGHAFAAERYGVVPDMITFAKGITAGA CCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC VPMGGVLVRKGIHDAFMKGPEHVVELFHGYTYSAHPLACAAGLATLDLYAREHTFTHARA CCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LEPFFADAMMSLKDKPGVLDIRTVGITGAVDLAPKEGAPGLKGYEALERAFHEEGLMMRI HHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEE AGDTLVVTPPLIISKDQVGELVEKLGRVIEKVA ECCEEEECCCCEECHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1618757; 6822556; 2500426 [H]