Click here to switch to the map view.

The map label for this gene is 154246220

Identifier: 154246220

GI number: 154246220

Start: 2540104

End: 2540847

Strand: Reverse

Name: 154246220

Synonym: Xaut_2278

Alternate gene names: NA

Gene position: 2540847-2540104 (Counterclockwise)

Preceding gene: 154246221

Following gene: 154246213

Centisome position: 47.86

GC content: 70.7

Gene sequence:

>744_bases
ATGAGCTTCACCCTCGGCCACGGCCTCGCCGCCTCCCTCGCCTTGCACGGGGCACTCATCCTGCCCTTCGTCGTGGTGCT
GGATCCGCCGCCGCCGCAGGACAGCCAGTTGCTGGTGGTGGAGCTTCAGGGCCTCGTCTCCGACACCCAGTCCGAGCAGC
AGGTGCTGCAGCAGACCAGGGGCGCCCCGGACCAGAAGCAGCAGGAGGAGGCCCAGGAGGAACAGAAGACGCAAGTCGCC
CAGGCGGCGTCTCCCGACCGGCCGGAGGAGGACCCGGCCCCCGACGGCACCCTCGCGCCGGCTCCTCCCCCATCGCCTGA
GCAGCAGGCTCAGGATGCTCCGCCGCAGGAGAGGGCGAAACCCGCAGAGGCGCAGTCGGGCACGCCCGGCCTTGCCGACG
TGCAGGGCGCGCAGGAGCAGAAGCAGGCGCAGACCGTGGCGCCCGAGGTCGACGAGGCCCAGATCCTGCGGGCCTATGTG
CGCAGCCTGACCAAGAAGCTGAAGGACAACATCGTCTATCCGCCGGATGCCCAGCGCTCCATCCGCAGGAAGGGCACGGC
CTACGTCTCCTTCGCGGTGGAGGCCGACGGCGCGCTGCGCCCCGGCACCCTGAAGATCGAGCGCTCCAGCGGCACCCCCG
CCTATGACGTGGCGGCGCTGCGCACGGTGGAAAAGAACGCCCCCTTCGACCCACCCCCACGCCCCATGCGCGTGGGGGTG
CCTGTCGACTACTTCCCGAACTGA

Upstream 100 bases:

>100_bases
ACGTGGCCGACGTGCTGAAGACCCTGGCCTTCACCAAGGTCGGAGTGCAGACCAAAGGCATCGCCGCGGGTGCGGGAACC
GCCCCGGAGGGAACGCTACC

Downstream 100 bases:

>100_bases
GGGCTGCCCCGGGCAGCGGGCGGGGCAGATCGGGAAACGAGGCGCCCGTGGCTGTCCTGCCCACGGGCGGGGCTGCGGCG
CAGGCCGGCGCTGTCGGTCA

Product: TonB family protein

Products: NA

Alternate protein names: NB-Like

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSFTLGHGLAASLALHGALILPFVVVLDPPPPQDSQLLVVELQGLVSDTQSEQQVLQQTRGAPDQKQQEEAQEEQKTQVA
QAASPDRPEEDPAPDGTLAPAPPPSPEQQAQDAPPQERAKPAEAQSGTPGLADVQGAQEQKQAQTVAPEVDEAQILRAYV
RSLTKKLKDNIVYPPDAQRSIRRKGTAYVSFAVEADGALRPGTLKIERSSGTPAYDVAALRTVEKNAPFDPPPRPMRVGV
PVDYFPN

Sequences:

>Translated_247_residues
MSFTLGHGLAASLALHGALILPFVVVLDPPPPQDSQLLVVELQGLVSDTQSEQQVLQQTRGAPDQKQQEEAQEEQKTQVA
QAASPDRPEEDPAPDGTLAPAPPPSPEQQAQDAPPQERAKPAEAQSGTPGLADVQGAQEQKQAQTVAPEVDEAQILRAYV
RSLTKKLKDNIVYPPDAQRSIRRKGTAYVSFAVEADGALRPGTLKIERSSGTPAYDVAALRTVEKNAPFDPPPRPMRVGV
PVDYFPN
>Mature_246_residues
SFTLGHGLAASLALHGALILPFVVVLDPPPPQDSQLLVVELQGLVSDTQSEQQVLQQTRGAPDQKQQEEAQEEQKTQVAQ
AASPDRPEEDPAPDGTLAPAPPPSPEQQAQDAPPQERAKPAEAQSGTPGLADVQGAQEQKQAQTVAPEVDEAQILRAYVR
SLTKKLKDNIVYPPDAQRSIRRKGTAYVSFAVEADGALRPGTLKIERSSGTPAYDVAALRTVEKNAPFDPPPRPMRVGVP
VDYFPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26498; Mature: 26367

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTLGHGLAASLALHGALILPFVVVLDPPPPQDSQLLVVELQGLVSDTQSEQQVLQQTR
CCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHC
GAPDQKQQEEAQEEQKTQVAQAASPDRPEEDPAPDGTLAPAPPPSPEQQAQDAPPQERAK
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHCC
PAEAQSGTPGLADVQGAQEQKQAQTVAPEVDEAQILRAYVRSLTKKLKDNIVYPPDAQRS
CCCCCCCCCCCHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
IRRKGTAYVSFAVEADGALRPGTLKIERSSGTPAYDVAALRTVEKNAPFDPPPRPMRVGV
HHHCCCEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECC
PVDYFPN
CCCCCCC
>Mature Secondary Structure 
SFTLGHGLAASLALHGALILPFVVVLDPPPPQDSQLLVVELQGLVSDTQSEQQVLQQTR
CCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHC
GAPDQKQQEEAQEEQKTQVAQAASPDRPEEDPAPDGTLAPAPPPSPEQQAQDAPPQERAK
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHCC
PAEAQSGTPGLADVQGAQEQKQAQTVAPEVDEAQILRAYVRSLTKKLKDNIVYPPDAQRS
CCCCCCCCCCCHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
IRRKGTAYVSFAVEADGALRPGTLKIERSSGTPAYDVAALRTVEKNAPFDPPPRPMRVGV
HHHCCCEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECC
PVDYFPN
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA