Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is cysW [H]
Identifier: 154246160
GI number: 154246160
Start: 2479035
End: 2479907
Strand: Direct
Name: cysW [H]
Synonym: Xaut_2217
Alternate gene names: 154246160
Gene position: 2479035-2479907 (Clockwise)
Preceding gene: 154246159
Following gene: 154246166
Centisome position: 46.7
GC content: 69.76
Gene sequence:
>873_bases ATGGCGGCCCCGGTCAACCGCAACCGTCGCCGGGTGGGCGATGGTGCGCGCACGCGGGCGGTGCTGCTCACCCTGGTGCT CGCCACCACGGCGGTGGCCCTCATCGCGCCGCTCGCGGTCATCTTCTCCGAGGCCTTCGCGCGCGGCTTTTCCGCTTATG CCGAGGCGCTGGTGCGACCGGACACGCTGCACGCCATCGGCCTCACGATTATCACCGCGCTCGTCTGCGTGCCGGTGAAC GTCGGCTTCGGCATCGCCGCCGCCTGGGCGGTCACCAAGTTCAGCTTCCCCGGCCGCAACCTGCTGCTGGCGGTGGTGGA ACTGCCCTTCTCCATCTCGCCCATCGTGGCCGGTGTCGCCTATCTGTTCGTCTATGGCGGGCAGGGGCTGTTCGGCCCGT TCCTGCAGGCCCACGACATCAAGATCGTGTTCGCCCTGCCGGCCATCATCCTCGCCAGCATGTTCGTCACCGCGCCGTTC GTGGTGCGCGAGCTGGTGCCGCTGATGATGGCGCAGGGGCGCGACGAGGAAGAGGCGGCGGTGAGCCTGGGCGCCAACGG CTTCGACGTGCTGCGGCTGGTCACCCTGCCCAACGTGCGCTTCGCCCTGCTCTATGGCGCGGCCTTGTGCAACGCGCGGG TGATGGGTGAGTTCGGCGCGGTGTCGGTGGTGTCGGGCAACATCCGCGGGCAGACCTCGACCTTGGCCCTGCAGATCGAG CTTTTGTACCAGGACAGCCACGTCCTCGCCGCCTTCGCCGCCGCGACGGTCCTGGCGGGCGTGGCGCTGTTCACCCTGGT GGCGAAATATCTCATCGAACGCGCTGAGCGCGCGCGCGAGGAGCGGGCTCCGCCCCGCCGGCCGGGGCACTGA
Upstream 100 bases:
>100_bases GCCATCGCCGTGACCATGCTGGGGCTCGCCTTCCTTATGCTGCTGGTGGTGAATGCGGTGCAGACGTGGCACCAGCGCAG TGCGCTGGGGGAGGGCTGAG
Downstream 100 bases:
>100_bases GGCGGCCGTTTACGGGACTGCGCGCCGCCTCAGTCAGCCGCGCGGGGCGGGCAGGCCGAGGGCGGTGGAGGAGGGCTGCT GGACGGGTGTCATCCGCTTC
Product: sulfate ABC transporter inner membrane subunit CysW
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MAAPVNRNRRRVGDGARTRAVLLTLVLATTAVALIAPLAVIFSEAFARGFSAYAEALVRPDTLHAIGLTIITALVCVPVN VGFGIAAAWAVTKFSFPGRNLLLAVVELPFSISPIVAGVAYLFVYGGQGLFGPFLQAHDIKIVFALPAIILASMFVTAPF VVRELVPLMMAQGRDEEEAAVSLGANGFDVLRLVTLPNVRFALLYGAALCNARVMGEFGAVSVVSGNIRGQTSTLALQIE LLYQDSHVLAAFAAATVLAGVALFTLVAKYLIERAERAREERAPPRRPGH
Sequences:
>Translated_290_residues MAAPVNRNRRRVGDGARTRAVLLTLVLATTAVALIAPLAVIFSEAFARGFSAYAEALVRPDTLHAIGLTIITALVCVPVN VGFGIAAAWAVTKFSFPGRNLLLAVVELPFSISPIVAGVAYLFVYGGQGLFGPFLQAHDIKIVFALPAIILASMFVTAPF VVRELVPLMMAQGRDEEEAAVSLGANGFDVLRLVTLPNVRFALLYGAALCNARVMGEFGAVSVVSGNIRGQTSTLALQIE LLYQDSHVLAAFAAATVLAGVALFTLVAKYLIERAERAREERAPPRRPGH >Mature_289_residues AAPVNRNRRRVGDGARTRAVLLTLVLATTAVALIAPLAVIFSEAFARGFSAYAEALVRPDTLHAIGLTIITALVCVPVNV GFGIAAAWAVTKFSFPGRNLLLAVVELPFSISPIVAGVAYLFVYGGQGLFGPFLQAHDIKIVFALPAIILASMFVTAPFV VRELVPLMMAQGRDEEEAAVSLGANGFDVLRLVTLPNVRFALLYGAALCNARVMGEFGAVSVVSGNIRGQTSTLALQIEL LYQDSHVLAAFAAATVLAGVALFTLVAKYLIERAERAREERAPPRRPGH
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=265, Percent_Identity=49.811320754717, Blast_Score=276, Evalue=1e-75, Organism=Escherichia coli, GI1788764, Length=209, Percent_Identity=36.3636363636364, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1786980, Length=228, Percent_Identity=28.9473684210526, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30782; Mature: 30650
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPVNRNRRRVGDGARTRAVLLTLVLATTAVALIAPLAVIFSEAFARGFSAYAEALVRP CCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DTLHAIGLTIITALVCVPVNVGFGIAAAWAVTKFSFPGRNLLLAVVELPFSISPIVAGVA CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHH YLFVYGGQGLFGPFLQAHDIKIVFALPAIILASMFVTAPFVVRELVPLMMAQGRDEEEAA HHHHCCCCCHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VSLGANGFDVLRLVTLPNVRFALLYGAALCNARVMGEFGAVSVVSGNIRGQTSTLALQIE HHCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEE LLYQDSHVLAAFAAATVLAGVALFTLVAKYLIERAERAREERAPPRRPGH EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AAPVNRNRRRVGDGARTRAVLLTLVLATTAVALIAPLAVIFSEAFARGFSAYAEALVRP CCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DTLHAIGLTIITALVCVPVNVGFGIAAAWAVTKFSFPGRNLLLAVVELPFSISPIVAGVA CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHH YLFVYGGQGLFGPFLQAHDIKIVFALPAIILASMFVTAPFVVRELVPLMMAQGRDEEEAA HHHHCCCCCHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VSLGANGFDVLRLVTLPNVRFALLYGAALCNARVMGEFGAVSVVSGNIRGQTSTLALQIE HHCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEE LLYQDSHVLAAFAAATVLAGVALFTLVAKYLIERAERAREERAPPRRPGH EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]