Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is pqqL [C]
Identifier: 154246147
GI number: 154246147
Start: 2463928
End: 2465337
Strand: Reverse
Name: pqqL [C]
Synonym: Xaut_2204
Alternate gene names: 154246147
Gene position: 2465337-2463928 (Counterclockwise)
Preceding gene: 154246148
Following gene: 154246146
Centisome position: 46.44
GC content: 68.09
Gene sequence:
>1410_bases ATGACGGAAGATCGCCACGTGTTCATGAGCCGCCTCACCATGATTGCTATTCTCGCCGCCACCGCGGCCACAGCCGCCCC CCGCATTGCTGACGCGGCGGGGCCGGACGTTACCCAGTTCCAGCTCGACAACGGCCTTCAGGTCATGGTCATCCCGGACC ACCGCACGCCGGTGGTCACCCACATGGTGTGGTACAAGGTGGGATCGGCCGACGAGCAGGCCGGCAAGTCCGGCATTGCC CATTTCCTCGAGCACCTGATGTTCAAGGGCACCGACGCCCACCCGCAGGGCCAGTTCTCGGCCGAGGTGGCGCGTCTCGG CGGCCAGGAGAACGCCTTCACCTCGCAGGACTACACCGCCTATTTCCAGCGCGTCGCCAAGGAGCACCTGGAAAAGGTGA TGGGCTTCGAAGCCGACCGCATGACCGGCCTCAAGCTCTCCGACGAGGTGGTGCTGCCCGAGCGCGACGTGGTGCTGGAA GAGCGCCGCATGCGTACCGACAACGACCCCGGCGCGCGCCTCTCCGAGGTGCTGCAGGCCACGACCTACGTCAACCACCC CTATCAGCACCCCATCATCGGCTGGGAGCACGAGATCAAGGGGCTGAACCGCGAGGATGCCCTCGCCTTCTACCGCCGTT ATTACGCGCCCAACAACGCGCTGCTCGTGGTGGCCGGCGACGTGGACCCGGAGACGGTCCGCACCCTCGCCGAGAAGACC TACGGCAAGGTGGCCCGCGCCGACACCCCGCCCCGCAACCGCCCGCAGGAACCCGAGCCCCAGGCCCACCGCCGGGTGGC GCTGTCCGACCCGCGCGTGGCCCAGCCGAGCCTGCAGCGCTCCTATCTGGTGCCCTCCTCCCGCACCGCCCAGCCGGGCG AGGCCGAGGCGCTGGAAGTGCTCGGCCAGATCCTCGGCGGCGGCCAGACCAGCCGCCTCTACCGTACCTTGGTGGCCGAG AAGGGCATCGCCGCCGGTTCCGGCTCCTGGTATCAAAGCACCGCATATGATGCCACCCGCTTCGTCACCTATGCTTCGCC CCGCCCGGGCGTGAGCCTGGAGGACCTTGAGGCGGCCGTGGACGCGGTGATCACCGAGCTGCAGGAAAAGGGCGTGGACG ACCTGGAGCTGGCCCGCGCCAAGACCCGGCTTACCGCCGACACCATCTATTCGCAGGACAACCAGGCCACCCTCGCCCGC ATCTACGGCGCCTCCTGGGCCACCGGCATGTCGGCCGACGATGTGCGGGCCTGGCCGGACCGCATCAAGGCGGTGACCGC CGAGCAGGTGAAGGACGTGGCGCGCCGGTACCTTGTCACCAATCGCGCCGTCACCGGCTACCTGAAGCAGTCGGAGCCGA AAAAGGACGCCGCTCCGAAAGCTGAAATCAAGAAGGACGACCGCTCGTGA
Upstream 100 bases:
>100_bases AAGTTAATCCACCGGGCGGGGCGATGTTGACGGGCGCAACCTTTGCTTCCGCGCCCGGCTTCCTATCTTTCCTTGACGTG CCCGTCGTTCGGCGCGTCGA
Downstream 100 bases:
>100_bases GGGCTGGCCCCGCCCCCCTTTTCGACCAGACCGGCAGCGCCCTGCGCGCCGGTCGTCTCCTCTTTGCGATGGTAACCATG GCCCTTTCCCTTCTTTCCGC
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MTEDRHVFMSRLTMIAILAATAATAAPRIADAAGPDVTQFQLDNGLQVMVIPDHRTPVVTHMVWYKVGSADEQAGKSGIA HFLEHLMFKGTDAHPQGQFSAEVARLGGQENAFTSQDYTAYFQRVAKEHLEKVMGFEADRMTGLKLSDEVVLPERDVVLE ERRMRTDNDPGARLSEVLQATTYVNHPYQHPIIGWEHEIKGLNREDALAFYRRYYAPNNALLVVAGDVDPETVRTLAEKT YGKVARADTPPRNRPQEPEPQAHRRVALSDPRVAQPSLQRSYLVPSSRTAQPGEAEALEVLGQILGGGQTSRLYRTLVAE KGIAAGSGSWYQSTAYDATRFVTYASPRPGVSLEDLEAAVDAVITELQEKGVDDLELARAKTRLTADTIYSQDNQATLAR IYGASWATGMSADDVRAWPDRIKAVTAEQVKDVARRYLVTNRAVTGYLKQSEPKKDAAPKAEIKKDDRS
Sequences:
>Translated_469_residues MTEDRHVFMSRLTMIAILAATAATAAPRIADAAGPDVTQFQLDNGLQVMVIPDHRTPVVTHMVWYKVGSADEQAGKSGIA HFLEHLMFKGTDAHPQGQFSAEVARLGGQENAFTSQDYTAYFQRVAKEHLEKVMGFEADRMTGLKLSDEVVLPERDVVLE ERRMRTDNDPGARLSEVLQATTYVNHPYQHPIIGWEHEIKGLNREDALAFYRRYYAPNNALLVVAGDVDPETVRTLAEKT YGKVARADTPPRNRPQEPEPQAHRRVALSDPRVAQPSLQRSYLVPSSRTAQPGEAEALEVLGQILGGGQTSRLYRTLVAE KGIAAGSGSWYQSTAYDATRFVTYASPRPGVSLEDLEAAVDAVITELQEKGVDDLELARAKTRLTADTIYSQDNQATLAR IYGASWATGMSADDVRAWPDRIKAVTAEQVKDVARRYLVTNRAVTGYLKQSEPKKDAAPKAEIKKDDRS >Mature_468_residues TEDRHVFMSRLTMIAILAATAATAAPRIADAAGPDVTQFQLDNGLQVMVIPDHRTPVVTHMVWYKVGSADEQAGKSGIAH FLEHLMFKGTDAHPQGQFSAEVARLGGQENAFTSQDYTAYFQRVAKEHLEKVMGFEADRMTGLKLSDEVVLPERDVVLEE RRMRTDNDPGARLSEVLQATTYVNHPYQHPIIGWEHEIKGLNREDALAFYRRYYAPNNALLVVAGDVDPETVRTLAEKTY GKVARADTPPRNRPQEPEPQAHRRVALSDPRVAQPSLQRSYLVPSSRTAQPGEAEALEVLGQILGGGQTSRLYRTLVAEK GIAAGSGSWYQSTAYDATRFVTYASPRPGVSLEDLEAAVDAVITELQEKGVDDLELARAKTRLTADTIYSQDNQATLARI YGASWATGMSADDVRAWPDRIKAVTAEQVKDVARRYLVTNRAVTGYLKQSEPKKDAAPKAEIKKDDRS
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI46593007, Length=438, Percent_Identity=25.3424657534247, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI94538354, Length=208, Percent_Identity=28.3653846153846, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI155969707, Length=285, Percent_Identity=25.6140350877193, Blast_Score=87, Evalue=4e-17, Organism=Escherichia coli, GI1787770, Length=244, Percent_Identity=29.5081967213115, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI2367164, Length=232, Percent_Identity=26.7241379310345, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71999683, Length=395, Percent_Identity=23.5443037974684, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17553678, Length=239, Percent_Identity=29.2887029288703, Blast_Score=86, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6323192, Length=233, Percent_Identity=30.4721030042918, Blast_Score=103, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6323421, Length=297, Percent_Identity=24.5791245791246, Blast_Score=80, Evalue=5e-16, Organism=Drosophila melanogaster, GI21357875, Length=458, Percent_Identity=25.764192139738, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI24646943, Length=458, Percent_Identity=25.764192139738, Blast_Score=102, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 51848; Mature: 51717
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00143 INSULINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEDRHVFMSRLTMIAILAATAATAAPRIADAAGPDVTQFQLDNGLQVMVIPDHRTPVVT CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEECCCCEEEEECCCCCCHHH HMVWYKVGSADEQAGKSGIAHFLEHLMFKGTDAHPQGQFSAEVARLGGQENAFTSQDYTA HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHH YFQRVAKEHLEKVMGFEADRMTGLKLSDEVVLPERDVVLEERRMRTDNDPGARLSEVLQA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCHHHHHHHHH TTYVNHPYQHPIIGWEHEIKGLNREDALAFYRRYYAPNNALLVVAGDVDPETVRTLAEKT HHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH YGKVARADTPPRNRPQEPEPQAHRRVALSDPRVAQPSLQRSYLVPSSRTAQPGEAEALEV HHHHHCCCCCCCCCCCCCCCHHHCEEECCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHH LGQILGGGQTSRLYRTLVAEKGIAAGSGSWYQSTAYDATRFVTYASPRPGVSLEDLEAAV HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHEEEEECCCCCCCCHHHHHHHH DAVITELQEKGVDDLELARAKTRLTADTIYSQDNQATLARIYGASWATGMSADDVRAWPD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHH RIKAVTAEQVKDVARRYLVTNRAVTGYLKQSEPKKDAAPKAEIKKDDRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TEDRHVFMSRLTMIAILAATAATAAPRIADAAGPDVTQFQLDNGLQVMVIPDHRTPVVT CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEECCCCEEEEECCCCCCHHH HMVWYKVGSADEQAGKSGIAHFLEHLMFKGTDAHPQGQFSAEVARLGGQENAFTSQDYTA HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHH YFQRVAKEHLEKVMGFEADRMTGLKLSDEVVLPERDVVLEERRMRTDNDPGARLSEVLQA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCHHHHHHHHH TTYVNHPYQHPIIGWEHEIKGLNREDALAFYRRYYAPNNALLVVAGDVDPETVRTLAEKT HHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH YGKVARADTPPRNRPQEPEPQAHRRVALSDPRVAQPSLQRSYLVPSSRTAQPGEAEALEV HHHHHCCCCCCCCCCCCCCCHHHCEEECCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHH LGQILGGGQTSRLYRTLVAEKGIAAGSGSWYQSTAYDATRFVTYASPRPGVSLEDLEAAV HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHEEEEECCCCCCCCHHHHHHHH DAVITELQEKGVDDLELARAKTRLTADTIYSQDNQATLARIYGASWATGMSADDVRAWPD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHH RIKAVTAEQVKDVARRYLVTNRAVTGYLKQSEPKKDAAPKAEIKKDDRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]