Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154246146

Identifier: 154246146

GI number: 154246146

Start: 2462558

End: 2463931

Strand: Reverse

Name: 154246146

Synonym: Xaut_2203

Alternate gene names: NA

Gene position: 2463931-2462558 (Counterclockwise)

Preceding gene: 154246147

Following gene: 154246145

Centisome position: 46.41

GC content: 69.43

Gene sequence:

>1374_bases
GTGAGGGCTGGCCCCGCCCCCCTTTTCGACCAGACCGGCAGCGCCCTGCGCGCCGGTCGTCTCCTCTTTGCGATGGTAAC
CATGGCCCTTTCCCTTCTTTCCGCCACCGCGGCCCAGTCCCAGTCCAGCCGCATCACCGAGGTGACCAGCCCCGGCGGCA
TCAAGGCCTGGCTGGTGCATGACACCACCCTGCCCCTGATCGCCGTGGAGTTCGCCTTCCTCGGCGGCGCCTCCCAGGAC
GGCAAGGACCTGCCCGGACTCGCCAACCTCACCGCCTCGCTGCTCGACGAGGGGGCCGGCGGCCTGGACGCCCACGCCTT
CCAAAGCGCGCTGGCCGACCATGCGGTGGAGCTGCATTTCGATGCCGGGCGCGACGAGATCCGCGGCTCCCTGCGCACCC
TCTCGGAGAACCGGGAGACCGCGTTCGACCTGTTGCGCCTCGCGGTGACCGAGCCACGCTTCGACACCGAAGCGGTGGAA
CGCATCCGCGCCTCCCAGCTCGCCATGCTACGCCGCCGCTCCACCGAGCCCAACGCCCTCGCCAACGACCGCTGGTTCGC
CCTCGCCTTCCCGAACCACCCCTATGGCCGGCCGGTGGACGGCACGCTGGAGACGGTCGCCCGCATCAGCCGCGACGACA
TCGCCGGCTTCGCCAAGCGCGCCATCGCCCGCTCCAACCTGCGGGTGGCGGTGGTGGGCGACATCAGCGCCGAGGAACTG
GGCAAGCGGCTCGACGCCGTGTTCGGCATCCTGCCGGCCACCGCCACCCTGGTCCCCGTACCCCATGTGGAGCCGCAGAA
GATCGGCACCGTGGATGTCATTCCCCTCGACGTGCCCCAGTCGGTGGTGGTGATGGGCACCGGCGGCCTGGAGCGGCGTG
ATCCGGACTTCATCCCCGCCTTCGTGCTCAACCACATCCTCGGCGGCAGCGCGTTTTCCTCCCGCCTGTTCAAGGAAGTG
CGCGAGGCTCGCGGGCTGGCCTATTCGGTCTATTCCTACCAGGTGGCCCTCGGCCACACCGGCCTGTGGTTCGCCGGCAC
CGCCACCAAGAACGAGCGGGCTGGGGAATCCATCGCCATCATCACCGACGAGTTCCGCAAGATCCTGAAGGACGGGCCGA
GCCAGACCGAGCTGGACGAGGCCAAGAGCTATCTCATGGGCAGCTATGCCCTGCGCTTCGACACCTCCTCCAAGGTCGCC
GGCCAGTTGCTCCAGATCCAGCTGGACGAGCTGGGCATCGACTATGTGGACCGGCGCAACGCGCTGATTGCCGCCGTCAC
CCTCGACGACCTGAAGCACGTGGCGGCGCGCCTCGCCACCGCCCGCGACGCCCTGGTGGTGGTGGTGGGCAAACCAGCGG
GCCTGGGCGGCTAG

Upstream 100 bases:

>100_bases
GGTACCTTGTCACCAATCGCGCCGTCACCGGCTACCTGAAGCAGTCGGAGCCGAAAAAGGACGCCGCTCCGAAAGCTGAA
ATCAAGAAGGACGACCGCTC

Downstream 100 bases:

>100_bases
CCCTGGCACCTAGGCCTCTCCCGGACCAGACAGCCCCGGCCTCGGCCGAGGCGCATGGTTGCGTTGGGTAACCTTAATCC
GCACGAGAACCGGTCTCGCC

Product: peptidase M16 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MRAGPAPLFDQTGSALRAGRLLFAMVTMALSLLSATAAQSQSSRITEVTSPGGIKAWLVHDTTLPLIAVEFAFLGGASQD
GKDLPGLANLTASLLDEGAGGLDAHAFQSALADHAVELHFDAGRDEIRGSLRTLSENRETAFDLLRLAVTEPRFDTEAVE
RIRASQLAMLRRRSTEPNALANDRWFALAFPNHPYGRPVDGTLETVARISRDDIAGFAKRAIARSNLRVAVVGDISAEEL
GKRLDAVFGILPATATLVPVPHVEPQKIGTVDVIPLDVPQSVVVMGTGGLERRDPDFIPAFVLNHILGGSAFSSRLFKEV
REARGLAYSVYSYQVALGHTGLWFAGTATKNERAGESIAIITDEFRKILKDGPSQTELDEAKSYLMGSYALRFDTSSKVA
GQLLQIQLDELGIDYVDRRNALIAAVTLDDLKHVAARLATARDALVVVVGKPAGLGG

Sequences:

>Translated_457_residues
MRAGPAPLFDQTGSALRAGRLLFAMVTMALSLLSATAAQSQSSRITEVTSPGGIKAWLVHDTTLPLIAVEFAFLGGASQD
GKDLPGLANLTASLLDEGAGGLDAHAFQSALADHAVELHFDAGRDEIRGSLRTLSENRETAFDLLRLAVTEPRFDTEAVE
RIRASQLAMLRRRSTEPNALANDRWFALAFPNHPYGRPVDGTLETVARISRDDIAGFAKRAIARSNLRVAVVGDISAEEL
GKRLDAVFGILPATATLVPVPHVEPQKIGTVDVIPLDVPQSVVVMGTGGLERRDPDFIPAFVLNHILGGSAFSSRLFKEV
REARGLAYSVYSYQVALGHTGLWFAGTATKNERAGESIAIITDEFRKILKDGPSQTELDEAKSYLMGSYALRFDTSSKVA
GQLLQIQLDELGIDYVDRRNALIAAVTLDDLKHVAARLATARDALVVVVGKPAGLGG
>Mature_457_residues
MRAGPAPLFDQTGSALRAGRLLFAMVTMALSLLSATAAQSQSSRITEVTSPGGIKAWLVHDTTLPLIAVEFAFLGGASQD
GKDLPGLANLTASLLDEGAGGLDAHAFQSALADHAVELHFDAGRDEIRGSLRTLSENRETAFDLLRLAVTEPRFDTEAVE
RIRASQLAMLRRRSTEPNALANDRWFALAFPNHPYGRPVDGTLETVARISRDDIAGFAKRAIARSNLRVAVVGDISAEEL
GKRLDAVFGILPATATLVPVPHVEPQKIGTVDVIPLDVPQSVVVMGTGGLERRDPDFIPAFVLNHILGGSAFSSRLFKEV
REARGLAYSVYSYQVALGHTGLWFAGTATKNERAGESIAIITDEFRKILKDGPSQTELDEAKSYLMGSYALRFDTSSKVA
GQLLQIQLDELGIDYVDRRNALIAAVTLDDLKHVAARLATARDALVVVVGKPAGLGG

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323192, Length=412, Percent_Identity=20.3883495145631, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 48942; Mature: 48942

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGPAPLFDQTGSALRAGRLLFAMVTMALSLLSATAAQSQSSRITEVTSPGGIKAWLVH
CCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEE
DTTLPLIAVEFAFLGGASQDGKDLPGLANLTASLLDEGAGGLDAHAFQSALADHAVELHF
CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCEEEEEE
DAGRDEIRGSLRTLSENRETAFDLLRLAVTEPRFDTEAVERIRASQLAMLRRRSTEPNAL
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
ANDRWFALAFPNHPYGRPVDGTLETVARISRDDIAGFAKRAIARSNLRVAVVGDISAEEL
CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
GKRLDAVFGILPATATLVPVPHVEPQKIGTVDVIPLDVPQSVVVMGTGGLERRDPDFIPA
HHHHHHHHHHHHCHHEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCHHH
FVLNHILGGSAFSSRLFKEVREARGLAYSVYSYQVALGHTGLWFAGTATKNERAGESIAI
HHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCEEEE
ITDEFRKILKDGPSQTELDEAKSYLMGSYALRFDTSSKVAGQLLQIQLDELGIDYVDRRN
EHHHHHHHHHCCCCCCHHHHHHHHHHHCEEEEECCCHHHHHHHHEEEHHHCCCCCCCCCC
ALIAAVTLDDLKHVAARLATARDALVVVVGKPAGLGG
CEEEEEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MRAGPAPLFDQTGSALRAGRLLFAMVTMALSLLSATAAQSQSSRITEVTSPGGIKAWLVH
CCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEE
DTTLPLIAVEFAFLGGASQDGKDLPGLANLTASLLDEGAGGLDAHAFQSALADHAVELHF
CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCEEEEEE
DAGRDEIRGSLRTLSENRETAFDLLRLAVTEPRFDTEAVERIRASQLAMLRRRSTEPNAL
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
ANDRWFALAFPNHPYGRPVDGTLETVARISRDDIAGFAKRAIARSNLRVAVVGDISAEEL
CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
GKRLDAVFGILPATATLVPVPHVEPQKIGTVDVIPLDVPQSVVVMGTGGLERRDPDFIPA
HHHHHHHHHHHHCHHEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCHHH
FVLNHILGGSAFSSRLFKEVREARGLAYSVYSYQVALGHTGLWFAGTATKNERAGESIAI
HHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCEEEE
ITDEFRKILKDGPSQTELDEAKSYLMGSYALRFDTSSKVAGQLLQIQLDELGIDYVDRRN
EHHHHHHHHHCCCCCCHHHHHHHHHHHCEEEEECCCHHHHHHHHEEEHHHCCCCCCCCCC
ALIAAVTLDDLKHVAARLATARDALVVVVGKPAGLGG
CEEEEEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]