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The map label for this gene is hypC [H]

Identifier: 154246128

GI number: 154246128

Start: 2444908

End: 2445207

Strand: Direct

Name: hypC [H]

Synonym: Xaut_2185

Alternate gene names: 154246128

Gene position: 2444908-2445207 (Clockwise)

Preceding gene: 154246127

Following gene: 154246129

Centisome position: 46.05

GC content: 68.0

Gene sequence:

>300_bases
ATGTGCCTCGGCATTCCCGGTCAGATCGTCGCCGTCGCCGATGAGGACGCCATGCTGTGCGTGGTGGATGTCTCCGGCGT
CCGCCGCAGCGTGGATGTGGTGTGCGTCGCCGAGCCCGGTGCGCCGCTGTCCGACCTCGTGGGCGCGTGGGTGCTGGTGC
ATGTGGGCTTCGCCATGAGCCGCATCGACGAGGAGGAGGCCGCCGCCACCCTCAAGGTGCTCACCGAGATCGGCGAGGCG
GCGGCGGAAATGGAAGCGCTGACAAAAGGCAGCGTCGATCTTCACCCCACCACTGCCTGA

Upstream 100 bases:

>100_bases
GGGATGACCGCCTTTTATCGGCAAATGCTGTCAAGCCCGGCCATGACGGTTGCGAAAGCGGCGTGGTTCCACCGAATTTT
GACCCTTTAGGAGCACTCCC

Downstream 100 bases:

>100_bases
GGAGACGGCCATGCGCTACGTCGACGAATTCCGCGACCCCGCCCTCGCCTCGGCGCTGGTGAAGGAGATCGGCGCCATCT
CGGTCCGGCTGGAACGCGGC

Product: hydrogenase assembly chaperone HypC/HupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MCLGIPGQIVAVADEDAMLCVVDVSGVRRSVDVVCVAEPGAPLSDLVGAWVLVHVGFAMSRIDEEEAAATLKVLTEIGEA
AAEMEALTKGSVDLHPTTA

Sequences:

>Translated_99_residues
MCLGIPGQIVAVADEDAMLCVVDVSGVRRSVDVVCVAEPGAPLSDLVGAWVLVHVGFAMSRIDEEEAAATLKVLTEIGEA
AAEMEALTKGSVDLHPTTA
>Mature_99_residues
MCLGIPGQIVAVADEDAMLCVVDVSGVRRSVDVVCVAEPGAPLSDLVGAWVLVHVGFAMSRIDEEEAAATLKVLTEIGEA
AAEMEALTKGSVDLHPTTA

Specific function: May Have A Specific Role In The Maturation Of The Large Subunits Of Hyd1 And Hyd2. [C]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

Organism=Escherichia coli, GI1789364, Length=77, Percent_Identity=51.9480519480519, Blast_Score=79, Evalue=4e-17,
Organism=Escherichia coli, GI1789083, Length=93, Percent_Identity=45.1612903225806, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 10190; Mature: 10190

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLGIPGQIVAVADEDAMLCVVDVSGVRRSVDVVCVAEPGAPLSDLVGAWVLVHVGFAMS
CCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
RIDEEEAAATLKVLTEIGEAAAEMEALTKGSVDLHPTTA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MCLGIPGQIVAVADEDAMLCVVDVSGVRRSVDVVCVAEPGAPLSDLVGAWVLVHVGFAMS
CCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
RIDEEEAAATLKVLTEIGEAAAEMEALTKGSVDLHPTTA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190 [H]