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The map label for this gene is hupK [H]

Identifier: 154246124

GI number: 154246124

Start: 2440941

End: 2441930

Strand: Direct

Name: hupK [H]

Synonym: Xaut_2181

Alternate gene names: 154246124

Gene position: 2440941-2441930 (Clockwise)

Preceding gene: 154246123

Following gene: 154246125

Centisome position: 45.98

GC content: 75.15

Gene sequence:

>990_bases
ATGATCCACGCTCCCGCCACGCTCCGCCGCCTCACCATCGCGCTCGACGGGCGCGCGGGGATGTGGCGCTTTGGGCGGGA
GACGGGGCCTGACCCGGCACAGGCGCTGGTCGGGCGTACGCCGGACGAGGCGGCGCGGCTCGCGCCCCTCGTCTTCAACC
TGTGCGGCGCCGCCCACGGCTTCGCCGCTGCCACCGCGCTGGGCCTGCCGGCGGCGGCGGACGGGGCGGCCATGGCGCGA
GAGACCGTGCGTGACCACGCTCTCGCCATGCTCCACACCTGGCCGCAGGCGCTGGGCGAGGCCCCCGACCGCGCCGCGCT
GGGCCTGCTCGCCCGGCCGGGACGCCCGGAGGATTTCGCCGCCGCCCTGGTAGGGGAGGGGGCGGACCTGTCCTCCTTCT
CGCGCGCCGAGCTGGACTCCTGGCTTCGCGAGGCGACCACGCCCACCGCCCGGCTCCTGGCCCACATGCGTCGCGAGGTC
GATCCCGCCGAGGGTCGGGCAGGGTTGCCGGAACTGACGGCGCAGGATGTGGCGGCGGCGCTGGATCCGGCACGGACACC
GGGCGCCGAGGGACTTCGCGAAACCAGCGCCCTCGGCCGTGTCGCACACACCCCGCTCGTCTCCGCCCTCCTCGCTGGCG
AGGGGCCGAGCCTGTTCGTGCGCCTGCTGGCCCGGCTGGTGGATTGCCTCGCCGCGTTGAAGCCGGCCTCCGCCGTCCCG
ACATACGATCTGCCCGCCGGCTTCGGCATCGCGCCCGCCGCGCGCGGGCTGCTCGGCCATGGGGTGCGGCTGGAGGCGGG
GCGCGTCGCTGCCTATCGCATCCTCTCCCCCAGCGCGTGGAACCTTGCTCCCGGTGGCCTGCTGGAGCGCGCCTTCGCGG
CGCTGACACCCGACCCCACGGCACGGCGGCTGGCGCCGCTTCTGGTGTCGGCCATCAATCCCTGCGTGCCGGTCACTTTG
TCCTATGCGGAGGAGGCTGCCCATGCATGA

Upstream 100 bases:

>100_bases
GGCCCGCCGGTCCGCCGCCTGAGATGTCCCGCCGCGCCGTGATCCTCGGCCCGCGCGCGGTACAAGGGGTGGCCCCGGAA
GTCCCGCAGGACGGCATCGC

Downstream 100 bases:

>100_bases
GATGGCCGTGTGCGAGAGCCTGCTTTCCGCCATGGAAGAGGCGGCGAAGGCGCAGAATTTCTCCCGCGTCACCCGCGTGC
GCCTTGCCATCGGCCGCTTC

Product: putative hydrogenase expression/formation protein HupK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MIHAPATLRRLTIALDGRAGMWRFGRETGPDPAQALVGRTPDEAARLAPLVFNLCGAAHGFAAATALGLPAAADGAAMAR
ETVRDHALAMLHTWPQALGEAPDRAALGLLARPGRPEDFAAALVGEGADLSSFSRAELDSWLREATTPTARLLAHMRREV
DPAEGRAGLPELTAQDVAAALDPARTPGAEGLRETSALGRVAHTPLVSALLAGEGPSLFVRLLARLVDCLAALKPASAVP
TYDLPAGFGIAPAARGLLGHGVRLEAGRVAAYRILSPSAWNLAPGGLLERAFAALTPDPTARRLAPLLVSAINPCVPVTL
SYAEEAAHA

Sequences:

>Translated_329_residues
MIHAPATLRRLTIALDGRAGMWRFGRETGPDPAQALVGRTPDEAARLAPLVFNLCGAAHGFAAATALGLPAAADGAAMAR
ETVRDHALAMLHTWPQALGEAPDRAALGLLARPGRPEDFAAALVGEGADLSSFSRAELDSWLREATTPTARLLAHMRREV
DPAEGRAGLPELTAQDVAAALDPARTPGAEGLRETSALGRVAHTPLVSALLAGEGPSLFVRLLARLVDCLAALKPASAVP
TYDLPAGFGIAPAARGLLGHGVRLEAGRVAAYRILSPSAWNLAPGGLLERAFAALTPDPTARRLAPLLVSAINPCVPVTL
SYAEEAAHA
>Mature_329_residues
MIHAPATLRRLTIALDGRAGMWRFGRETGPDPAQALVGRTPDEAARLAPLVFNLCGAAHGFAAATALGLPAAADGAAMAR
ETVRDHALAMLHTWPQALGEAPDRAALGLLARPGRPEDFAAALVGEGADLSSFSRAELDSWLREATTPTARLLAHMRREV
DPAEGRAGLPELTAQDVAAALDPARTPGAEGLRETSALGRVAHTPLVSALLAGEGPSLFVRLLARLVDCLAALKPASAVP
TYDLPAGFGIAPAARGLLGHGVRLEAGRVAAYRILSPSAWNLAPGGLLERAFAALTPDPTARRLAPLLVSAINPCVPVTL
SYAEEAAHA

Specific function: Unknown

COG id: COG0374

COG function: function code C; Ni,Fe-hydrogenase I large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupK family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34023; Mature: 34023

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHAPATLRRLTIALDGRAGMWRFGRETGPDPAQALVGRTPDEAARLAPLVFNLCGAAHG
CCCCCHHHHEEEEEECCCCCCHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FAAATALGLPAAADGAAMARETVRDHALAMLHTWPQALGEAPDRAALGLLARPGRPEDFA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHH
AALVGEGADLSSFSRAELDSWLREATTPTARLLAHMRREVDPAEGRAGLPELTAQDVAAA
HHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LDPARTPGAEGLRETSALGRVAHTPLVSALLAGEGPSLFVRLLARLVDCLAALKPASAVP
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC
TYDLPAGFGIAPAARGLLGHGVRLEAGRVAAYRILSPSAWNLAPGGLLERAFAALTPDPT
CCCCCCCCCCCHHHHHHHHCCCEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCHH
ARRLAPLLVSAINPCVPVTLSYAEEAAHA
HHHHHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIHAPATLRRLTIALDGRAGMWRFGRETGPDPAQALVGRTPDEAARLAPLVFNLCGAAHG
CCCCCHHHHEEEEEECCCCCCHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FAAATALGLPAAADGAAMARETVRDHALAMLHTWPQALGEAPDRAALGLLARPGRPEDFA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHH
AALVGEGADLSSFSRAELDSWLREATTPTARLLAHMRREVDPAEGRAGLPELTAQDVAAA
HHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LDPARTPGAEGLRETSALGRVAHTPLVSALLAGEGPSLFVRLLARLVDCLAALKPASAVP
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC
TYDLPAGFGIAPAARGLLGHGVRLEAGRVAAYRILSPSAWNLAPGGLLERAFAALTPDPT
CCCCCCCCCCCHHHHHHHHCCCEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCHH
ARRLAPLLVSAINPCVPVTLSYAEEAAHA
HHHHHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2007559; 8497190 [H]