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The map label for this gene is hupJ [H]

Identifier: 154246123

GI number: 154246123

Start: 2440030

End: 2440944

Strand: Direct

Name: hupJ [H]

Synonym: Xaut_2180

Alternate gene names: 154246123

Gene position: 2440030-2440944 (Clockwise)

Preceding gene: 154246122

Following gene: 154246124

Centisome position: 45.96

GC content: 70.93

Gene sequence:

>915_bases
ATGTCCGCCACCTCCTCCCCCTCCCACGCCTTCTTCGAGGGCTCCTATCTGGGCGACAAGGCGCGCCTTGCCCCTACAGC
GCGCCTGGAATGCAAGGTGTGCTGGCACGTCTACGACCCGGCCGAGGGCTGCGAGACGTGGCAGATCCCGGCCGGCACGC
CGTTCACCGCGCTGCCAGAGCATTGGCGCTGCCCGGTGTGCGACGGCGCCCGCGACCAGTTCATGGTGCTGGATGGCGGC
GCGCCGGATCTCTCCGCGCTCGCCCCCGCCCCGGCGGCCGTGGCGGCGGATCCCCATCTGGAAGCCCAGCTTCGGGACAT
GCCGGGGCGGTTCGAGGCGGTGTTCCGCGAGATCCATTCGGCCAAGATGAAGGGCGTGCCCTTCGTCAACGAGAGCCTGG
GGGTGAAGGCCGTGGGCTTCCGCGCCCATGACGGCCGCGCGCTCGGCGTGCTGGTGACGCCCTGGTTCATGAACCTGGTG
CTGCTGCCCAACGCGCAGGATGACTGGAGCGGCCTGAAGACCGGCGACAAGGAGCTGATCGCCTTCCCGTCCGGTTCTTA
TGAATTCCTCGCCGCCAACCGGCCGGAGACGGGGCCCTACAAGGCCTGTTCCCTGTTCTCGCCCATGTTCGATTTCTCCT
CCATGCTGCAGGCGGTGGAAACGGCGGCGGCGGTGCTGCCGGCCCTGTTCGATGCCGCCAACCGAGAGGAGGGCACCCGC
TCCGGCGAGATCCGCCGCCGCGCGGAAGAGGAGGCGGCAACGCTCGCCCAGGCCGAAGCGGCCGCGCTCGCGTCCGAGGA
ACCCGCCCCCCGGCCCGCCGGTCCGCCGCCTGAGATGTCCCGCCGCGCCGTGATCCTCGGCCCGCGCGCGGTACAAGGGG
TGGCCCCGGAAGTCCCGCAGGACGGCATCGCATGA

Upstream 100 bases:

>100_bases
AGGTGACCGAGGTGCCGGAAGTGGCCTGCGCCGCCCGCGAGGACATCGCCGACAGCGCCGAACGCCTCGCCGACGTGCTG
GCGGCGATCCGGTGAGCGCC

Downstream 100 bases:

>100_bases
TCCACGCTCCCGCCACGCTCCGCCGCCTCACCATCGCGCTCGACGGGCGCGCGGGGATGTGGCGCTTTGGGCGGGAGACG
GGGCCTGACCCGGCACAGGC

Product: rubredoxin-type Fe(Cys)4 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MSATSSPSHAFFEGSYLGDKARLAPTARLECKVCWHVYDPAEGCETWQIPAGTPFTALPEHWRCPVCDGARDQFMVLDGG
APDLSALAPAPAAVAADPHLEAQLRDMPGRFEAVFREIHSAKMKGVPFVNESLGVKAVGFRAHDGRALGVLVTPWFMNLV
LLPNAQDDWSGLKTGDKELIAFPSGSYEFLAANRPETGPYKACSLFSPMFDFSSMLQAVETAAAVLPALFDAANREEGTR
SGEIRRRAEEEAATLAQAEAAALASEEPAPRPAGPPPEMSRRAVILGPRAVQGVAPEVPQDGIA

Sequences:

>Translated_304_residues
MSATSSPSHAFFEGSYLGDKARLAPTARLECKVCWHVYDPAEGCETWQIPAGTPFTALPEHWRCPVCDGARDQFMVLDGG
APDLSALAPAPAAVAADPHLEAQLRDMPGRFEAVFREIHSAKMKGVPFVNESLGVKAVGFRAHDGRALGVLVTPWFMNLV
LLPNAQDDWSGLKTGDKELIAFPSGSYEFLAANRPETGPYKACSLFSPMFDFSSMLQAVETAAAVLPALFDAANREEGTR
SGEIRRRAEEEAATLAQAEAAALASEEPAPRPAGPPPEMSRRAVILGPRAVQGVAPEVPQDGIA
>Mature_303_residues
SATSSPSHAFFEGSYLGDKARLAPTARLECKVCWHVYDPAEGCETWQIPAGTPFTALPEHWRCPVCDGARDQFMVLDGGA
PDLSALAPAPAAVAADPHLEAQLRDMPGRFEAVFREIHSAKMKGVPFVNESLGVKAVGFRAHDGRALGVLVTPWFMNLVL
LPNAQDDWSGLKTGDKELIAFPSGSYEFLAANRPETGPYKACSLFSPMFDFSSMLQAVETAAAVLPALFDAANREEGTRS
GEIRRRAEEEAATLAQAEAAALASEEPAPRPAGPPPEMSRRAVILGPRAVQGVAPEVPQDGIA

Specific function: Unknown

COG id: COG1773

COG function: function code C; Rubredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004039
- InterPro:   IPR018527 [H]

Pfam domain/function: PF00301 Rubredoxin [H]

EC number: NA

Molecular weight: Translated: 32468; Mature: 32337

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00202 RUBREDOXIN ; PS50903 RUBREDOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATSSPSHAFFEGSYLGDKARLAPTARLECKVCWHVYDPAEGCETWQIPAGTPFTALPE
CCCCCCCCCEEEECCCCCCHHHCCCCCCEEEEEEEEECCCCCCCCEEECCCCCCCCCCCC
HWRCPVCDGARDQFMVLDGGAPDLSALAPAPAAVAADPHLEAQLRDMPGRFEAVFREIHS
CCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCEECCCCHHHHHHCCCHHHHHHHHHHHH
AKMKGVPFVNESLGVKAVGFRAHDGRALGVLVTPWFMNLVLLPNAQDDWSGLKTGDKELI
HHHCCCCCCCCCCCEEEEEEECCCCCEEEEEECCHHEEEEECCCCCCCCCCCCCCCCEEE
AFPSGSYEFLAANRPETGPYKACSLFSPMFDFSSMLQAVETAAAVLPALFDAANREEGTR
EECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SGEIRRRAEEEAATLAQAEAAALASEEPAPRPAGPPPEMSRRAVILGPRAVQGVAPEVPQ
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCEEEECCHHHCCCCCCCCC
DGIA
CCCC
>Mature Secondary Structure 
SATSSPSHAFFEGSYLGDKARLAPTARLECKVCWHVYDPAEGCETWQIPAGTPFTALPE
CCCCCCCCEEEECCCCCCHHHCCCCCCEEEEEEEEECCCCCCCCEEECCCCCCCCCCCC
HWRCPVCDGARDQFMVLDGGAPDLSALAPAPAAVAADPHLEAQLRDMPGRFEAVFREIHS
CCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCEECCCCHHHHHHCCCHHHHHHHHHHHH
AKMKGVPFVNESLGVKAVGFRAHDGRALGVLVTPWFMNLVLLPNAQDDWSGLKTGDKELI
HHHCCCCCCCCCCCEEEEEEECCCCCEEEEEECCHHEEEEECCCCCCCCCCCCCCCCEEE
AFPSGSYEFLAANRPETGPYKACSLFSPMFDFSSMLQAVETAAAVLPALFDAANREEGTR
EECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SGEIRRRAEEEAATLAQAEAAALASEEPAPRPAGPPPEMSRRAVILGPRAVQGVAPEVPQ
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCEEEECCHHHCCCCCCCCC
DGIA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190; 2007559 [H]