Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154246048
Identifier: 154246048
GI number: 154246048
Start: 2363937
End: 2364524
Strand: Reverse
Name: 154246048
Synonym: Xaut_2105
Alternate gene names: NA
Gene position: 2364524-2363937 (Counterclockwise)
Preceding gene: 154246049
Following gene: 154246047
Centisome position: 44.54
GC content: 72.11
Gene sequence:
>588_bases ATGGCGATGTCTTTCCCCACGGCACTGTCCGCCGGTGACCGCGCCGGCAAGGCGGCCCTCGCGGCGGTGATCGCAGCCGC CATGGCGACGAGCCTTGCGGTCGAGCCATCCATCGGTGGACTGCTGGCTGCGGCGCTGGTGCCGGTCCTTGCCGCCATCG CCGTCATCGACGCACGGCACTTCATCATTCCCGATTCCTTGAACGCGCTGGGTGCGCTCCTCGGCCTCGCCGCTGCCGCC ACCGCGCCGGAACCGGCGGATGGCCTCGGCGCGGCGATCCTCGGCGGCGCAGCCTTGGCCTTCGTGTTCCTGGCCATCCA CCTCGGCTATCGCGCGTTGCGCGGCCGCGACGGGCTGGGGCTGGGCGACGTGAAGCTCGCGGCGGTGGCGGGAATCTGGC TCAGCGTCACCGCCATGCCGGTGGCGGTGGAGATCGCGGCGCTCGCCGGGCTCCTCGCCTATGGCATCACCCGTCTCGCC GCCGGCCGCGCCGTGCGGGTACGGGACCGGTTGCCGTTCGGCCTGTTCTTCGCGCCAGCCATCTGGATCGGCTGGCTCTT CGACCGCTGGTCGGCCGGGCTGTTGTGA
Upstream 100 bases:
>100_bases CCCATACGGTGGCTGAAGAGCTGCGCGCCAAGCTGCGCGGCACCGTCACCACCCTGCCAGGCGGCCCGCAGGCGCCGCTC GGCGCACGGTGAGGCCGGCC
Downstream 100 bases:
>100_bases GGAGGATCGGGAAGCGGCCATGAAGCTGACGGCTCCCCCTGCCCTGCGCCGGCTGCTGGCCGCGCTCCTGCTCGCGGCCA TCCTCGGCCCGCCGGTGACG
Product: peptidase A24A prepilin type IV
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MAMSFPTALSAGDRAGKAALAAVIAAAMATSLAVEPSIGGLLAAALVPVLAAIAVIDARHFIIPDSLNALGALLGLAAAA TAPEPADGLGAAILGGAALAFVFLAIHLGYRALRGRDGLGLGDVKLAAVAGIWLSVTAMPVAVEIAALAGLLAYGITRLA AGRAVRVRDRLPFGLFFAPAIWIGWLFDRWSAGLL
Sequences:
>Translated_195_residues MAMSFPTALSAGDRAGKAALAAVIAAAMATSLAVEPSIGGLLAAALVPVLAAIAVIDARHFIIPDSLNALGALLGLAAAA TAPEPADGLGAAILGGAALAFVFLAIHLGYRALRGRDGLGLGDVKLAAVAGIWLSVTAMPVAVEIAALAGLLAYGITRLA AGRAVRVRDRLPFGLFFAPAIWIGWLFDRWSAGLL >Mature_194_residues AMSFPTALSAGDRAGKAALAAVIAAAMATSLAVEPSIGGLLAAALVPVLAAIAVIDARHFIIPDSLNALGALLGLAAAAT APEPADGLGAAILGGAALAFVFLAIHLGYRALRGRDGLGLGDVKLAAVAGIWLSVTAMPVAVEIAALAGLLAYGITRLAA GRAVRVRDRLPFGLFFAPAIWIGWLFDRWSAGLL
Specific function: Unknown
COG id: COG1989
COG function: function code NOU; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.23.43; 2.1.1.-
Molecular weight: Translated: 19528; Mature: 19397
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMSFPTALSAGDRAGKAALAAVIAAAMATSLAVEPSIGGLLAAALVPVLAAIAVIDARH CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FIIPDSLNALGALLGLAAAATAPEPADGLGAAILGGAALAFVFLAIHLGYRALRGRDGLG EECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LGDVKLAAVAGIWLSVTAMPVAVEIAALAGLLAYGITRLAAGRAVRVRDRLPFGLFFAPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH IWIGWLFDRWSAGLL HHHHHHHHHHHCCCC >Mature Secondary Structure AMSFPTALSAGDRAGKAALAAVIAAAMATSLAVEPSIGGLLAAALVPVLAAIAVIDARH CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FIIPDSLNALGALLGLAAAATAPEPADGLGAAILGGAALAFVFLAIHLGYRALRGRDGLG EECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LGDVKLAAVAGIWLSVTAMPVAVEIAALAGLLAYGITRLAAGRAVRVRDRLPFGLFFAPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH IWIGWLFDRWSAGLL HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA