Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is tauC [C]
Identifier: 154246028
GI number: 154246028
Start: 2345394
End: 2346353
Strand: Direct
Name: tauC [C]
Synonym: Xaut_2085
Alternate gene names: 154246028
Gene position: 2345394-2346353 (Clockwise)
Preceding gene: 154246027
Following gene: 154246029
Centisome position: 44.18
GC content: 66.88
Gene sequence:
>960_bases ATGAAGAGCGCCGCGGCGAAATCCCCCGTGAAGATGCAGGCCCCCCTGCATATCGCCGGCGCAGCGGAGGGGGCGCTTGC GCGTCCCGCCGCCGGATCCATCCTGCTGCGGCCCGAGCGTCCGGCCGTTGGGGTCGTGGTGCCGCCAGACCGTTCGCTGC CCGGCCTCGCCCGGCGCTGGCTCAGACTGAACATGCAGGCGATCCGGGCGACGCTGCTCGGGGCGCTGGCCATCGGCCTG TTCATCCTCGCCTGGCACGTGGTCACCGTGAACCGCATGGACCTCTATGTGCGGTTCCTGAACGTGCCCTCGCCGGAACA GGTGCTGGAGAGCGCGCGCACCGCCTTCTCCACCGGCACCTTCTTCGACCATATCGTCATTTCATGCCGTCGGATCTTCC TCGGCTTCGCCCTCGCGGCGTTGGTGGCGGTGCCGATGGGACTGCTGATGGGGCGCTATGCGCTCATCAAGGAATTCGTG TTCCCGGTCTGCGAGGTGTTGCGGCCCATCCCGGCCATTGCCTGGGTGCCCATGTCCATCATGCTGTGGCCCACCAACGA GCAGAGCATCGTCTTCATCACCTTCCTCGGCGCGTTCTTCCCCATCCTGCTCAATACGCTGCACGGCATGGCCAATGTGG ACGAGGTGCTGGTGCGCGCCGCGCGCTGCCTAGGGGCGAGCGAGCGCGCCACCTTCCTCGAGGTCTATTTTCCGGCGGTG CTGCCGCAGATCTTCACCGGCCTCACGGTGGGTATGGGGGTGGCCTGGGTGTCGCTGATCGCGGCGGAGATGATCTCCGG CCAGTTCGGCATCGGCTACTTCACGTGGGAGGCCTATTCCCTGGTGCAGTATCCTGACATCGCGCTGGGCATGATCACCA TCGGCGTGCTGGGGCTCGCGTCGTCCTTCCTCATCCGGCTGGTCGGGCGGGCGGTGACGCCCTGGTCCCGGGCCAAATGA
Upstream 100 bases:
>100_bases TGAAGGCCGACGCGGAAGCGGCGGCGGCCAAGGCGGGCGGCAAGGTGATGAGCTTCGGCGATGCGCTGAAGGCCGCCACC GCGGGGCGCGGGTGAACGCC
Downstream 100 bases:
>100_bases ACCCCGCGAGGCGCGCCATGGCCATTCCCGCAACCGCCCCCACGAACACCGGCCTCATCGAGGTCACCGGCTTCGAGCTG GCCTACGACACCATCGACGG
Product: binding-protein-dependent transport systems inner membrane component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKSAAAKSPVKMQAPLHIAGAAEGALARPAAGSILLRPERPAVGVVVPPDRSLPGLARRWLRLNMQAIRATLLGALAIGL FILAWHVVTVNRMDLYVRFLNVPSPEQVLESARTAFSTGTFFDHIVISCRRIFLGFALAALVAVPMGLLMGRYALIKEFV FPVCEVLRPIPAIAWVPMSIMLWPTNEQSIVFITFLGAFFPILLNTLHGMANVDEVLVRAARCLGASERATFLEVYFPAV LPQIFTGLTVGMGVAWVSLIAAEMISGQFGIGYFTWEAYSLVQYPDIALGMITIGVLGLASSFLIRLVGRAVTPWSRAK
Sequences:
>Translated_319_residues MKSAAAKSPVKMQAPLHIAGAAEGALARPAAGSILLRPERPAVGVVVPPDRSLPGLARRWLRLNMQAIRATLLGALAIGL FILAWHVVTVNRMDLYVRFLNVPSPEQVLESARTAFSTGTFFDHIVISCRRIFLGFALAALVAVPMGLLMGRYALIKEFV FPVCEVLRPIPAIAWVPMSIMLWPTNEQSIVFITFLGAFFPILLNTLHGMANVDEVLVRAARCLGASERATFLEVYFPAV LPQIFTGLTVGMGVAWVSLIAAEMISGQFGIGYFTWEAYSLVQYPDIALGMITIGVLGLASSFLIRLVGRAVTPWSRAK >Mature_319_residues MKSAAAKSPVKMQAPLHIAGAAEGALARPAAGSILLRPERPAVGVVVPPDRSLPGLARRWLRLNMQAIRATLLGALAIGL FILAWHVVTVNRMDLYVRFLNVPSPEQVLESARTAFSTGTFFDHIVISCRRIFLGFALAALVAVPMGLLMGRYALIKEFV FPVCEVLRPIPAIAWVPMSIMLWPTNEQSIVFITFLGAFFPILLNTLHGMANVDEVLVRAARCLGASERATFLEVYFPAV LPQIFTGLTVGMGVAWVSLIAAEMISGQFGIGYFTWEAYSLVQYPDIALGMITIGVLGLASSFLIRLVGRAVTPWSRAK
Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=248, Percent_Identity=31.4516129032258, Blast_Score=124, Evalue=8e-30, Organism=Escherichia coli, GI87081802, Length=217, Percent_Identity=31.7972350230415, Blast_Score=112, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34649; Mature: 34649
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSAAAKSPVKMQAPLHIAGAAEGALARPAAGSILLRPERPAVGVVVPPDRSLPGLARRW CCCCCCCCCCEEECCEEEECCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCHHHHHHH LRLNMQAIRATLLGALAIGLFILAWHVVTVNRMDLYVRFLNVPSPEQVLESARTAFSTGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEECCCCHHHHHHHHHHHHHCCH FFDHIVISCRRIFLGFALAALVAVPMGLLMGRYALIKEFVFPVCEVLRPIPAIAWVPMSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEE MLWPTNEQSIVFITFLGAFFPILLNTLHGMANVDEVLVRAARCLGASERATFLEVYFPAV EEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH LPQIFTGLTVGMGVAWVSLIAAEMISGQFGIGYFTWEAYSLVQYPDIALGMITIGVLGLA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHH SSFLIRLVGRAVTPWSRAK HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKSAAAKSPVKMQAPLHIAGAAEGALARPAAGSILLRPERPAVGVVVPPDRSLPGLARRW CCCCCCCCCCEEECCEEEECCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCHHHHHHH LRLNMQAIRATLLGALAIGLFILAWHVVTVNRMDLYVRFLNVPSPEQVLESARTAFSTGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEECCCCHHHHHHHHHHHHHCCH FFDHIVISCRRIFLGFALAALVAVPMGLLMGRYALIKEFVFPVCEVLRPIPAIAWVPMSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEE MLWPTNEQSIVFITFLGAFFPILLNTLHGMANVDEVLVRAARCLGASERATFLEVYFPAV EEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH LPQIFTGLTVGMGVAWVSLIAAEMISGQFGIGYFTWEAYSLVQYPDIALGMITIGVLGLA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHH SSFLIRLVGRAVTPWSRAK HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA