Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is ssuA [H]
Identifier: 154246027
GI number: 154246027
Start: 2343934
End: 2345388
Strand: Direct
Name: ssuA [H]
Synonym: Xaut_2084
Alternate gene names: 154246027
Gene position: 2343934-2345388 (Clockwise)
Preceding gene: 154246026
Following gene: 154246028
Centisome position: 44.15
GC content: 63.85
Gene sequence:
>1455_bases ATGACCCAGTTTCGCGCCAAGTCCTTCCGCTCAAGCCTGCTTCGCACCGTGGCCGCCGTCCTCACGGCAAGCTGCGCCTT TGCGGCGCTTCCCGCCCGTGCCCAGACCGCTATCAGCTTCGGCATCGGCACCCAGGACACCACCACCAACACGGTGACCA CCGGCGTCGTCATCAAGGAGCTGAAGCTGCTGGAGAAGTACCTGCCCAAGGACGGCAAGTACGCCAACGTTGCCTACACC ATCGACTGGCAGAACTTCACCTCCGGTCCGCCGGTCACGAACGGCATGATGGCGGACAAGCTCCAGTTCGGCGCCATGGG CGATTATCCGCTGGTGGTGAACGGCTATACCTTCCAGTCCAATCCCCAGTCCAAGTCGCAGCTCATCGGCATCGCCGCCT ATAATCTCGACGGCTCCGGCAACGGCGTGGTGGTGCACAAGGACTCGCCCTATTTCGAACTATCCGACCTGAAGGGGAAG GTGCTGAGCGTGCCGTTCGGCTCGGCGGCCCACGGCATGATCCTCAAGGCCATGCAGGACAAGGGCTGGCCCGCCGACTA TTTCAAGCTGGTGAGCCAGTCGCCGGAGGTGGGCTCCACCAACCTCCAGGAAAAGAAGATCGACGCCCACGCCGATTTCG TGCCCTTTGCCGAGCTGCTGCCGTTCCGCGGCTTCGCCCGCAAGATCTTCGACGGGGTGGAGACCAACGCCCCCACCTGG CACGGCATGGTGGTGCGTACCGATTTCGCGCAGAAGTATCCGGAAGTCGTCGTGGCCTATCTGAAGGCCGTGATCGAGGC CAATGACTGGGTCCGCAAGGATCCGCAGGGCGCGGCCGAGAAGATCGCCAAGTGGACCGGTATCGACAAGGAAGTGGTCT ACATCTTCCTCGGCCCGGGCGGCATCATGACCCTGGATCCCACCCTCAAGCCCCAGCTCGTGGCCGACGCGGCGGAGGAT GCCGCCGTGCTGCAGAAGCTCGGCCGCATGAAGGAATTCGACACCAAGGCCTGGGTCAACGACACCTATATGCGCCAGGC TTTCAAGGAAATGGGCCTCGATTACGAGGCGCAGCTCAAAAGCCTCGCCAATTACGAGGTGAGCGGCGACGACAGCTTCT GCAAGGTGAAGATCACCGAGCCGCGCAAGGCCGGCGAGATCTGGATCGAGGGCGAGGGCGTCAAGCCCTATTCCAGCGCC GCCTGCACGCTGGGCGCTCTGGCCGAGCTGACCGCCCAGGGCAAGAAGGCCAACATGACCTATCTGTTCGATACCGCCCG CGGCATCAAGCTGTTCGCCACCGATGCGTTCTTCGCGGTGAGCGCGAAGGACGGCAAGAGGGAGATCCTGCCCTTCATGC TGAAGGCCGACGCGGAAGCGGCGGCGGCCAAGGCGGGCGGCAAGGTGATGAGCTTCGGCGATGCGCTGAAGGCCGCCACC GCGGGGCGCGGGTGA
Upstream 100 bases:
>100_bases CAACTAATCGACACCCCCTCCGCATCTTCCTTTGAACGAATGGAAGCTGGCGCCCGAAGATCACCGTCGAGAGCCGTCTT TGCCCCGAGAGGTGGATCCG
Downstream 100 bases:
>100_bases ACGCCATGAAGAGCGCCGCGGCGAAATCCCCCGTGAAGATGCAGGCCCCCCTGCATATCGCCGGCGCAGCGGAGGGGGCG CTTGCGCGTCCCGCCGCCGG
Product: ABC transporter substrate-binding protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MTQFRAKSFRSSLLRTVAAVLTASCAFAALPARAQTAISFGIGTQDTTTNTVTTGVVIKELKLLEKYLPKDGKYANVAYT IDWQNFTSGPPVTNGMMADKLQFGAMGDYPLVVNGYTFQSNPQSKSQLIGIAAYNLDGSGNGVVVHKDSPYFELSDLKGK VLSVPFGSAAHGMILKAMQDKGWPADYFKLVSQSPEVGSTNLQEKKIDAHADFVPFAELLPFRGFARKIFDGVETNAPTW HGMVVRTDFAQKYPEVVVAYLKAVIEANDWVRKDPQGAAEKIAKWTGIDKEVVYIFLGPGGIMTLDPTLKPQLVADAAED AAVLQKLGRMKEFDTKAWVNDTYMRQAFKEMGLDYEAQLKSLANYEVSGDDSFCKVKITEPRKAGEIWIEGEGVKPYSSA ACTLGALAELTAQGKKANMTYLFDTARGIKLFATDAFFAVSAKDGKREILPFMLKADAEAAAAKAGGKVMSFGDALKAAT AGRG
Sequences:
>Translated_484_residues MTQFRAKSFRSSLLRTVAAVLTASCAFAALPARAQTAISFGIGTQDTTTNTVTTGVVIKELKLLEKYLPKDGKYANVAYT IDWQNFTSGPPVTNGMMADKLQFGAMGDYPLVVNGYTFQSNPQSKSQLIGIAAYNLDGSGNGVVVHKDSPYFELSDLKGK VLSVPFGSAAHGMILKAMQDKGWPADYFKLVSQSPEVGSTNLQEKKIDAHADFVPFAELLPFRGFARKIFDGVETNAPTW HGMVVRTDFAQKYPEVVVAYLKAVIEANDWVRKDPQGAAEKIAKWTGIDKEVVYIFLGPGGIMTLDPTLKPQLVADAAED AAVLQKLGRMKEFDTKAWVNDTYMRQAFKEMGLDYEAQLKSLANYEVSGDDSFCKVKITEPRKAGEIWIEGEGVKPYSSA ACTLGALAELTAQGKKANMTYLFDTARGIKLFATDAFFAVSAKDGKREILPFMLKADAEAAAAKAGGKVMSFGDALKAAT AGRG >Mature_483_residues TQFRAKSFRSSLLRTVAAVLTASCAFAALPARAQTAISFGIGTQDTTTNTVTTGVVIKELKLLEKYLPKDGKYANVAYTI DWQNFTSGPPVTNGMMADKLQFGAMGDYPLVVNGYTFQSNPQSKSQLIGIAAYNLDGSGNGVVVHKDSPYFELSDLKGKV LSVPFGSAAHGMILKAMQDKGWPADYFKLVSQSPEVGSTNLQEKKIDAHADFVPFAELLPFRGFARKIFDGVETNAPTWH GMVVRTDFAQKYPEVVVAYLKAVIEANDWVRKDPQGAAEKIAKWTGIDKEVVYIFLGPGGIMTLDPTLKPQLVADAAEDA AVLQKLGRMKEFDTKAWVNDTYMRQAFKEMGLDYEAQLKSLANYEVSGDDSFCKVKITEPRKAGEIWIEGEGVKPYSSAA CTLGALAELTAQGKKANMTYLFDTARGIKLFATDAFFAVSAKDGKREILPFMLKADAEAAAAKAGGKVMSFGDALKAATA GRG
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=221, Percent_Identity=29.8642533936652, Blast_Score=73, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 52421; Mature: 52290
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQFRAKSFRSSLLRTVAAVLTASCAFAALPARAQTAISFGIGTQDTTTNTVTTGVVIKE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCCCCEEHHHHHHHH LKLLEKYLPKDGKYANVAYTIDWQNFTSGPPVTNGMMADKLQFGAMGDYPLVVNGYTFQS HHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECEEECC NPQSKSQLIGIAAYNLDGSGNGVVVHKDSPYFELSDLKGKVLSVPFGSAAHGMILKAMQD CCCCCCEEEEEEEEECCCCCCEEEEECCCCCEEECCCCCEEEECCCCCCHHHHHHHHHHC KGWPADYFKLVSQSPEVGSTNLQEKKIDAHADFVPFAELLPFRGFARKIFDGVETNAPTW CCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCC HGMVVRTDFAQKYPEVVVAYLKAVIEANDWVRKDPQGAAEKIAKWTGIDKEVVYIFLGPG CEEEEECHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCCCEEEEEEECCC GIMTLDPTLKPQLVADAAEDAAVLQKLGRMKEFDTKAWVNDTYMRQAFKEMGLDYEAQLK CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCHHHHHH SLANYEVSGDDSFCKVKITEPRKAGEIWIEGEGVKPYSSAACTLGALAELTAQGKKANMT HHHCCEECCCCCEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEE YLFDTARGIKLFATDAFFAVSAKDGKREILPFMLKADAEAAAAKAGGKVMSFGDALKAAT EEEECCCCEEEEEECEEEEEECCCCCHHHHHHHHHCCCHHHHHHCCCCEEEHHHHHHHHC AGRG CCCC >Mature Secondary Structure TQFRAKSFRSSLLRTVAAVLTASCAFAALPARAQTAISFGIGTQDTTTNTVTTGVVIKE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCCCCEEHHHHHHHH LKLLEKYLPKDGKYANVAYTIDWQNFTSGPPVTNGMMADKLQFGAMGDYPLVVNGYTFQS HHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECEEECC NPQSKSQLIGIAAYNLDGSGNGVVVHKDSPYFELSDLKGKVLSVPFGSAAHGMILKAMQD CCCCCCEEEEEEEEECCCCCCEEEEECCCCCEEECCCCCEEEECCCCCCHHHHHHHHHHC KGWPADYFKLVSQSPEVGSTNLQEKKIDAHADFVPFAELLPFRGFARKIFDGVETNAPTW CCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCC HGMVVRTDFAQKYPEVVVAYLKAVIEANDWVRKDPQGAAEKIAKWTGIDKEVVYIFLGPG CEEEEECHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCCCEEEEEEECCC GIMTLDPTLKPQLVADAAEDAAVLQKLGRMKEFDTKAWVNDTYMRQAFKEMGLDYEAQLK CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCHHHHHH SLANYEVSGDDSFCKVKITEPRKAGEIWIEGEGVKPYSSAACTLGALAELTAQGKKANMT HHHCCEECCCCCEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEE YLFDTARGIKLFATDAFFAVSAKDGKREILPFMLKADAEAAAAKAGGKVMSFGDALKAAT EEEECCCCEEEEEECEEEEEECCCCCHHHHHHHHHCCCHHHHHHCCCCEEEHHHHHHHHC AGRG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]