Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is yfeJ [H]

Identifier: 154245972

GI number: 154245972

Start: 2288726

End: 2289592

Strand: Direct

Name: yfeJ [H]

Synonym: Xaut_2029

Alternate gene names: 154245972

Gene position: 2288726-2289592 (Clockwise)

Preceding gene: 154245971

Following gene: 154245973

Centisome position: 43.11

GC content: 72.09

Gene sequence:

>867_bases
GTGAGCAACCGGAATAGCTCTGGCGAAGGCTTTGGGCCGGGGGATCTGGACTCCTCACGTCCGGACCCGGTGGAAGGTGC
GGGCGCGGATCGCGTCACGACCACGAGCGGAACGCCGAGCGCAACGCTTGCCGCCGGCACCGTGCTGGTGGTGCTGCATC
AGGCCCGCTCCACCCCCGGCCGCATCGGCGAGCGCCTTGAGCGGCGCGGTTATGCCCTGGACGTGCGCCGCCCCGCCCTG
GGTGATGCCCTGCCCGAACGCCTCGACGGCCATGACGGGGTGGTGGTGTTCGGCGGCCCCATGAGCGCCAACGACCCCAC
CCCCTTCATCACCGAAGAGATCCGCCTGCTGGAGCGGGCGCTGGCCTCCGCCACCCCCAGCCTCGGGGTCTGCCTCGGCG
CCCAGCTCATGGCCAAGGCCCTGGGCGCCCGCGTCGCCCCCCATGAGGAAGGGGCGTGCGAGATCGGCTACTACCCGCTG
GAAGCCACAACGGCCGGCGCCGCGCTGATGCCGTGGCCGAGCCATGTCTACCATTGGCACTCGGAGGGCTTCGACCTGCC
GGCGGGAGCAGACCTGCTCGCCACCGGCTCGGCCTTCCCCAACCAGGCGTTCCGCTATGGCGGCACCGCCTACGGCCTCC
AGTTCCATCCCGAGGTGACGCGGGAGATGATGTGCGCCTGGACCGAGCGCGGCGCCCACCGCCTCACCAGCCCCGGCGCC
CAGCCCCGCGAGGCGCACCTCGACGGCTGGGGGCGCTATGACGGCGCCGTGTGCCGCTGGCTTGATGCCTTCCTCGACGC
GTTCCTGGGTCCTTGCCGTGGTTCGGGCATCGGGCCGGGCGGGCAAACCGAACCGAAGTCGGCCTGA

Upstream 100 bases:

>100_bases
GAGGACAACCTCGTGTGGCGCGCGGCCGAGCTTCTGAACGTCGGCTCGCGCGATCGCATCCGCATCCGCCGCGAGGTCCG
GGAGGAGACGGAAACTGGCG

Downstream 100 bases:

>100_bases
ACCGTGCCGATGGTGACGAACCTCCCGATATGGCATTGATCCCCGCACGACTGTCATCGTCCTGCGGTATGGTGGTCTAG
CGATGCTGTTTCCGCCGGCC

Product: glutamine amidotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSNRNSSGEGFGPGDLDSSRPDPVEGAGADRVTTTSGTPSATLAAGTVLVVLHQARSTPGRIGERLERRGYALDVRRPAL
GDALPERLDGHDGVVVFGGPMSANDPTPFITEEIRLLERALASATPSLGVCLGAQLMAKALGARVAPHEEGACEIGYYPL
EATTAGAALMPWPSHVYHWHSEGFDLPAGADLLATGSAFPNQAFRYGGTAYGLQFHPEVTREMMCAWTERGAHRLTSPGA
QPREAHLDGWGRYDGAVCRWLDAFLDAFLGPCRGSGIGPGGQTEPKSA

Sequences:

>Translated_288_residues
MSNRNSSGEGFGPGDLDSSRPDPVEGAGADRVTTTSGTPSATLAAGTVLVVLHQARSTPGRIGERLERRGYALDVRRPAL
GDALPERLDGHDGVVVFGGPMSANDPTPFITEEIRLLERALASATPSLGVCLGAQLMAKALGARVAPHEEGACEIGYYPL
EATTAGAALMPWPSHVYHWHSEGFDLPAGADLLATGSAFPNQAFRYGGTAYGLQFHPEVTREMMCAWTERGAHRLTSPGA
QPREAHLDGWGRYDGAVCRWLDAFLDAFLGPCRGSGIGPGGQTEPKSA
>Mature_287_residues
SNRNSSGEGFGPGDLDSSRPDPVEGAGADRVTTTSGTPSATLAAGTVLVVLHQARSTPGRIGERLERRGYALDVRRPALG
DALPERLDGHDGVVVFGGPMSANDPTPFITEEIRLLERALASATPSLGVCLGAQLMAKALGARVAPHEEGACEIGYYPLE
ATTAGAALMPWPSHVYHWHSEGFDLPAGADLLATGSAFPNQAFRYGGTAYGLQFHPEVTREMMCAWTERGAHRLTSPGAQ
PREAHLDGWGRYDGAVCRWLDAFLDAFLGPCRGSGIGPGGQTEPKSA

Specific function: Unknown

COG id: COG0518

COG function: function code F; GMP synthase - Glutamine amidotransferase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR000991 [H]

Pfam domain/function: PF00117 GATase [H]

EC number: NA

Molecular weight: Translated: 30319; Mature: 30188

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRNSSGEGFGPGDLDSSRPDPVEGAGADRVTTTSGTPSATLAAGTVLVVLHQARSTPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCHH
RIGERLERRGYALDVRRPALGDALPERLDGHDGVVVFGGPMSANDPTPFITEEIRLLERA
HHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH
LASATPSLGVCLGAQLMAKALGARVAPHEEGACEIGYYPLEATTAGAALMPWPSHVYHWH
HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECEEECCCCCCCCEECCCCHHHEEEC
SEGFDLPAGADLLATGSAFPNQAFRYGGTAYGLQFHPEVTREMMCAWTERGAHRLTSPGA
CCCCCCCCCCCCEECCCCCCCHHHHCCCEEECEEECHHHHHHHHHHHHHHCCHHHCCCCC
QPREAHLDGWGRYDGAVCRWLDAFLDAFLGPCRGSGIGPGGQTEPKSA
CCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNRNSSGEGFGPGDLDSSRPDPVEGAGADRVTTTSGTPSATLAAGTVLVVLHQARSTPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCHH
RIGERLERRGYALDVRRPALGDALPERLDGHDGVVVFGGPMSANDPTPFITEEIRLLERA
HHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH
LASATPSLGVCLGAQLMAKALGARVAPHEEGACEIGYYPLEATTAGAALMPWPSHVYHWH
HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECEEECCCCCCCCEECCCCHHHEEEC
SEGFDLPAGADLLATGSAFPNQAFRYGGTAYGLQFHPEVTREMMCAWTERGAHRLTSPGA
CCCCCCCCCCCCEECCCCCCCHHHHCCCEEECEEECHHHHHHHHHHHHHHCCHHHCCCCC
QPREAHLDGWGRYDGAVCRWLDAFLDAFLGPCRGSGIGPGGQTEPKSA
CCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7612925; 11677609 [H]