Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is fieF [H]
Identifier: 154245914
GI number: 154245914
Start: 2228216
End: 2229124
Strand: Direct
Name: fieF [H]
Synonym: Xaut_1971
Alternate gene names: 154245914
Gene position: 2228216-2229124 (Clockwise)
Preceding gene: 154245912
Following gene: 154245925
Centisome position: 41.97
GC content: 64.14
Gene sequence:
>909_bases GTGTCGGGTTCGGCGAGCCAGAAATTGTCGTTTCAGGCCATGATCTTCACGGCCTGCCTGTTTCCCTTCTACATTCTCGC GGCCACGCTCACCAATTCGGCGGCGATCCTGACCGACCTGTTGGCGACCTCCTTCGACCTTACCGCGCTGACCGCCTGCT GGCTGGTGCTGCGGCTCGCCCACAATTCCCATTCGGGCAAATATGCCTACGGCCTCGGCAAGCTGGAAAACCTCGCCGAG CTGATGATCGCACTGCTGCAGACGGTGCTGGTCTTCATCGCCGGCTCCAACGCCATCATGCGCATCATCCATCCGGAAGG GGTGAGCGGGGCGGAGCTGGGCCTGTTCGTCACCGCCGCCGCCGTGATCGGCAACGCCATCTTGAATCGCAAGGCCACGC GCCTTGCCCATGAGACCCGCTCGCCGGTGCTGGCGGCGCAGGCCCGGGTGCACCTGGTGTCGGCCATCTCCTCCGGTTCG GTGTTCATCGTCACCGTGATTCTGTCGATCTTCCAGAACGTGACCTGGATGTATTATCTCGATCCGGTGGCGTCGTTCGT CGTCATTGGCTTCATGATCTACAACATCTTCGCCATGCTCTCGAGCTCGGTGGCCTCGCTGCTCGACCAGGCCATCGACG AGGCGGGCCAGCTGCGCATCCTCAAGGTGCTCACCAGCCATTTCGATGATTTCGACGAGCTGGGCGACATCCGCACCCGG CAGTTCGGCGGCAAGATGTTCGTGGAGCTGCACCTCGGCTTCGAGGGCGACTGGACGGTGGCGAAGACGCGCGCCGTGGT CGCCCGGCTGACCGACGCGGTGCGGCAGGAATTCAAGCAGGCCGGCGACGAGGTGGACGTGGCGGTGGTGCTCATTCCCG CCCACGGCACCGAGGCCGAGGCCGCCTGA
Upstream 100 bases:
>100_bases GTGCGGATCCGCCGCCACGCTGCTTGACGCGGCGTGCCTGATGGTCCTCATGGGGGTAAGGCGCTGAGGGCGGCGCCGCC ATTCGACAAAGGGGGCAGGG
Downstream 100 bases:
>100_bases GGCGCTCCCTTCGATCAGAGGCAGGGAACGCCCGCGCTCCGGCGCCGTGATCAGTGCTCGGACAGCACCACGTCGTCGGA CCACTCGCCCTCCACCTCCT
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSGSASQKLSFQAMIFTACLFPFYILAATLTNSAAILTDLLATSFDLTALTACWLVLRLAHNSHSGKYAYGLGKLENLAE LMIALLQTVLVFIAGSNAIMRIIHPEGVSGAELGLFVTAAAVIGNAILNRKATRLAHETRSPVLAAQARVHLVSAISSGS VFIVTVILSIFQNVTWMYYLDPVASFVVIGFMIYNIFAMLSSSVASLLDQAIDEAGQLRILKVLTSHFDDFDELGDIRTR QFGGKMFVELHLGFEGDWTVAKTRAVVARLTDAVRQEFKQAGDEVDVAVVLIPAHGTEAEAA
Sequences:
>Translated_302_residues MSGSASQKLSFQAMIFTACLFPFYILAATLTNSAAILTDLLATSFDLTALTACWLVLRLAHNSHSGKYAYGLGKLENLAE LMIALLQTVLVFIAGSNAIMRIIHPEGVSGAELGLFVTAAAVIGNAILNRKATRLAHETRSPVLAAQARVHLVSAISSGS VFIVTVILSIFQNVTWMYYLDPVASFVVIGFMIYNIFAMLSSSVASLLDQAIDEAGQLRILKVLTSHFDDFDELGDIRTR QFGGKMFVELHLGFEGDWTVAKTRAVVARLTDAVRQEFKQAGDEVDVAVVLIPAHGTEAEAA >Mature_301_residues SGSASQKLSFQAMIFTACLFPFYILAATLTNSAAILTDLLATSFDLTALTACWLVLRLAHNSHSGKYAYGLGKLENLAEL MIALLQTVLVFIAGSNAIMRIIHPEGVSGAELGLFVTAAAVIGNAILNRKATRLAHETRSPVLAAQARVHLVSAISSGSV FIVTVILSIFQNVTWMYYLDPVASFVVIGFMIYNIFAMLSSSVASLLDQAIDEAGQLRILKVLTSHFDDFDELGDIRTRQ FGGKMFVELHLGFEGDWTVAKTRAVVARLTDAVRQEFKQAGDEVDVAVVLIPAHGTEAEAA
Specific function: Cation-efflux transporter that may have a role in detoxification [H]
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. FieF subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=263, Percent_Identity=25.8555133079848, Blast_Score=68, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 32571; Mature: 32440
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSASQKLSFQAMIFTACLFPFYILAATLTNSAAILTDLLATSFDLTALTACWLVLRLA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH HNSHSGKYAYGLGKLENLAELMIALLQTVLVFIAGSNAIMRIIHPEGVSGAELGLFVTAA HCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHH AVIGNAILNRKATRLAHETRSPVLAAQARVHLVSAISSGSVFIVTVILSIFQNVTWMYYL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHEEHH DPVASFVVIGFMIYNIFAMLSSSVASLLDQAIDEAGQLRILKVLTSHFDDFDELGDIRTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH QFGGKMFVELHLGFEGDWTVAKTRAVVARLTDAVRQEFKQAGDEVDVAVVLIPAHGTEAE HCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC AA CC >Mature Secondary Structure SGSASQKLSFQAMIFTACLFPFYILAATLTNSAAILTDLLATSFDLTALTACWLVLRLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH HNSHSGKYAYGLGKLENLAELMIALLQTVLVFIAGSNAIMRIIHPEGVSGAELGLFVTAA HCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHH AVIGNAILNRKATRLAHETRSPVLAAQARVHLVSAISSGSVFIVTVILSIFQNVTWMYYL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHEEHH DPVASFVVIGFMIYNIFAMLSSSVASLLDQAIDEAGQLRILKVLTSHFDDFDELGDIRTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH QFGGKMFVELHLGFEGDWTVAKTRAVVARLTDAVRQEFKQAGDEVDVAVVLIPAHGTEAE HCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC AA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA