Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is zur [H]
Identifier: 154245832
GI number: 154245832
Start: 2127425
End: 2127952
Strand: Direct
Name: zur [H]
Synonym: Xaut_1888
Alternate gene names: 154245832
Gene position: 2127425-2127952 (Clockwise)
Preceding gene: 154245829
Following gene: 154245833
Centisome position: 40.07
GC content: 72.16
Gene sequence:
>528_bases GTGACCCATTCTGGCGACCATCCTAGTGATCATGATCACGGCCAATGCGTGGCCGGCGCCCTGGCGCGCATGGAGAAGTG CTGCGCGGAGAAAGGCCTGCGCCTGACGCCGCTGCGCCGTAGCGTCATGAAGGCGCTGGCCGAGACCCACGTGCCGCTCG GCGCCTACGAGATCGTGGAGCGCCTGGCCGCCGGCGGCGAGCCGACGCCGCCCATGTCGGTCTACCGGGTGCTGGATTTC CTGGTGGCCGAGGGGCTCGCCCACCGCATCGAGAGCCGCAACGCGTTCCTGGCCTGCGGCCATCCCCATGATGCCGAAGA GGTGGTGGTGTTCCTCATCTGCGAACGCTGCGGCCTGACCAAGGAAGTGGCCTCCCACGCGGTCGGGCGCGACCTTGCCT GGGCGGCGCGGGCCGCCGGCTTCGAGCCGCGCCAGCGGGTGCTGGAGGTGGCTGGCACCTGCGCCAGCTGCCGGGAAGCG GCGTCCGCAGCCGCGCCGGGAGCGGCCGAGACGGCCGGCGCCGGTTGA
Upstream 100 bases:
>100_bases GCAGATTGCAACGCTCCTCCCCGTGGCGCAACGCGACGTTGGATTGGATGTTGCATACCCGCGGATGGCAGGACGTGCGG CGATGTACTAAATAGGAAGC
Downstream 100 bases:
>100_bases CGCTCGCCGCCGCCCGGCCTACTCGAAACCCGTCCGTGCCCCCTCCCGCGCCGTATCAGGGCCGGACGTGCCGGTCGCGG ACGTGTCTGCGTGCGGACGA
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTHSGDHPSDHDHGQCVAGALARMEKCCAEKGLRLTPLRRSVMKALAETHVPLGAYEIVERLAAGGEPTPPMSVYRVLDF LVAEGLAHRIESRNAFLACGHPHDAEEVVVFLICERCGLTKEVASHAVGRDLAWAARAAGFEPRQRVLEVAGTCASCREA ASAAAPGAAETAGAG
Sequences:
>Translated_175_residues MTHSGDHPSDHDHGQCVAGALARMEKCCAEKGLRLTPLRRSVMKALAETHVPLGAYEIVERLAAGGEPTPPMSVYRVLDF LVAEGLAHRIESRNAFLACGHPHDAEEVVVFLICERCGLTKEVASHAVGRDLAWAARAAGFEPRQRVLEVAGTCASCREA ASAAAPGAAETAGAG >Mature_174_residues THSGDHPSDHDHGQCVAGALARMEKCCAEKGLRLTPLRRSVMKALAETHVPLGAYEIVERLAAGGEPTPPMSVYRVLDFL VAEGLAHRIESRNAFLACGHPHDAEEVVVFLICERCGLTKEVASHAVGRDLAWAARAAGFEPRQRVLEVAGTCASCREAA SAAAPGAAETAGAG
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=146, Percent_Identity=33.5616438356164, Blast_Score=94, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 18420; Mature: 18289
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHSGDHPSDHDHGQCVAGALARMEKCCAEKGLRLTPLRRSVMKALAETHVPLGAYEIVE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH RLAAGGEPTPPMSVYRVLDFLVAEGLAHRIESRNAFLACGHPHDAEEVVVFLICERCGLT HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCH KEVASHAVGRDLAWAARAAGFEPRQRVLEVAGTCASCREAASAAAPGAAETAGAG HHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure THSGDHPSDHDHGQCVAGALARMEKCCAEKGLRLTPLRRSVMKALAETHVPLGAYEIVE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH RLAAGGEPTPPMSVYRVLDFLVAEGLAHRIESRNAFLACGHPHDAEEVVVFLICERCGLT HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCH KEVASHAVGRDLAWAARAAGFEPRQRVLEVAGTCASCREAASAAAPGAAETAGAG HHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]