Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is dnaJ [C]
Identifier: 154245820
GI number: 154245820
Start: 2114180
End: 2114584
Strand: Direct
Name: dnaJ [C]
Synonym: Xaut_1876
Alternate gene names: 154245820
Gene position: 2114180-2114584 (Clockwise)
Preceding gene: 154245816
Following gene: 154245821
Centisome position: 39.82
GC content: 70.86
Gene sequence:
>405_bases ATGTCCGACGACGCCGTCTACGCCTACCAGAAGGACGCGCTGACCGGCCATCGCCCCACCTGGAAGATGGGTGCGAAGGG CGACGGCCAGCCCGGCGCCTCCGCCCATGGCGCCCCCGATCCGGACGGCATGCGCGACCCCTTCGGCTTCACCGCCGAAA TGGGCGGCGCCTTCCGCGCCGACCGGCCGGAGCCCGACGGGCGCATCGTGCGCACCACCGAGCGCCGGGCGCTGGAGCTG ATGGGGCTGGAGATGTCCGCCGAGCCGGCGGAGATCAAGGCCCGCTACAAGGCGCTGGTGAAGCTGCACCACCCGGACGC CAACGGCGGCGACCGCTCGTCCGAGGACCGGCTGCGCAGCGTCATTCAGGCTTATAACAGCCTCAAGCAGGCAGGTTTCT GCTGA
Upstream 100 bases:
>100_bases CCACAAGGCGCCCAAGGGTCGGCACCAGGAAGGTCAGTACTGGCACTACTGCATCGACCACGTGAAGGCCTACAACCAGT CGTACAATTATTTCGCCGGC
Downstream 100 bases:
>100_bases CCGATCCGAAGGATGGCCGGCTTCACGCGGCTGCGGACCGAAACGGCCCCGCACCGGAACGAACACAGGGAAGAGACGCG CCCGGCGCGTCGACGGAGGA
Product: heat shock protein DnaJ domain-containing protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSDDAVYAYQKDALTGHRPTWKMGAKGDGQPGASAHGAPDPDGMRDPFGFTAEMGGAFRADRPEPDGRIVRTTERRALEL MGLEMSAEPAEIKARYKALVKLHHPDANGGDRSSEDRLRSVIQAYNSLKQAGFC
Sequences:
>Translated_134_residues MSDDAVYAYQKDALTGHRPTWKMGAKGDGQPGASAHGAPDPDGMRDPFGFTAEMGGAFRADRPEPDGRIVRTTERRALEL MGLEMSAEPAEIKARYKALVKLHHPDANGGDRSSEDRLRSVIQAYNSLKQAGFC >Mature_133_residues SDDAVYAYQKDALTGHRPTWKMGAKGDGQPGASAHGAPDPDGMRDPFGFTAEMGGAFRADRPEPDGRIVRTTERRALELM GLEMSAEPAEIKARYKALVKLHHPDANGGDRSSEDRLRSVIQAYNSLKQAGFC
Specific function: Interacts With Dnak To Disassemble A Protein Complex At The Phage Lambda Origin Of Replication. Stimulates, Jointly With Grpe, The Atpase Activity Of Dnak. [C]
COG id: COG2214
COG function: function code O; DnaJ-class molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001623 - InterPro: IPR015609 - InterPro: IPR003095 [H]
Pfam domain/function: PF00226 DnaJ [H]
EC number: NA
Molecular weight: Translated: 14576; Mature: 14445
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDAVYAYQKDALTGHRPTWKMGAKGDGQPGASAHGAPDPDGMRDPFGFTAEMGGAFRA CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DRPEPDGRIVRTTERRALELMGLEMSAEPAEIKARYKALVKLHHPDANGGDRSSEDRLRS CCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHH VIQAYNSLKQAGFC HHHHHHHHHHCCCC >Mature Secondary Structure SDDAVYAYQKDALTGHRPTWKMGAKGDGQPGASAHGAPDPDGMRDPFGFTAEMGGAFRA CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DRPEPDGRIVRTTERRALELMGLEMSAEPAEIKARYKALVKLHHPDANGGDRSSEDRLRS CCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHH VIQAYNSLKQAGFC HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1917840 [H]