Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is dnaJ [C]

Identifier: 154245820

GI number: 154245820

Start: 2114180

End: 2114584

Strand: Direct

Name: dnaJ [C]

Synonym: Xaut_1876

Alternate gene names: 154245820

Gene position: 2114180-2114584 (Clockwise)

Preceding gene: 154245816

Following gene: 154245821

Centisome position: 39.82

GC content: 70.86

Gene sequence:

>405_bases
ATGTCCGACGACGCCGTCTACGCCTACCAGAAGGACGCGCTGACCGGCCATCGCCCCACCTGGAAGATGGGTGCGAAGGG
CGACGGCCAGCCCGGCGCCTCCGCCCATGGCGCCCCCGATCCGGACGGCATGCGCGACCCCTTCGGCTTCACCGCCGAAA
TGGGCGGCGCCTTCCGCGCCGACCGGCCGGAGCCCGACGGGCGCATCGTGCGCACCACCGAGCGCCGGGCGCTGGAGCTG
ATGGGGCTGGAGATGTCCGCCGAGCCGGCGGAGATCAAGGCCCGCTACAAGGCGCTGGTGAAGCTGCACCACCCGGACGC
CAACGGCGGCGACCGCTCGTCCGAGGACCGGCTGCGCAGCGTCATTCAGGCTTATAACAGCCTCAAGCAGGCAGGTTTCT
GCTGA

Upstream 100 bases:

>100_bases
CCACAAGGCGCCCAAGGGTCGGCACCAGGAAGGTCAGTACTGGCACTACTGCATCGACCACGTGAAGGCCTACAACCAGT
CGTACAATTATTTCGCCGGC

Downstream 100 bases:

>100_bases
CCGATCCGAAGGATGGCCGGCTTCACGCGGCTGCGGACCGAAACGGCCCCGCACCGGAACGAACACAGGGAAGAGACGCG
CCCGGCGCGTCGACGGAGGA

Product: heat shock protein DnaJ domain-containing protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSDDAVYAYQKDALTGHRPTWKMGAKGDGQPGASAHGAPDPDGMRDPFGFTAEMGGAFRADRPEPDGRIVRTTERRALEL
MGLEMSAEPAEIKARYKALVKLHHPDANGGDRSSEDRLRSVIQAYNSLKQAGFC

Sequences:

>Translated_134_residues
MSDDAVYAYQKDALTGHRPTWKMGAKGDGQPGASAHGAPDPDGMRDPFGFTAEMGGAFRADRPEPDGRIVRTTERRALEL
MGLEMSAEPAEIKARYKALVKLHHPDANGGDRSSEDRLRSVIQAYNSLKQAGFC
>Mature_133_residues
SDDAVYAYQKDALTGHRPTWKMGAKGDGQPGASAHGAPDPDGMRDPFGFTAEMGGAFRADRPEPDGRIVRTTERRALELM
GLEMSAEPAEIKARYKALVKLHHPDANGGDRSSEDRLRSVIQAYNSLKQAGFC

Specific function: Interacts With Dnak To Disassemble A Protein Complex At The Phage Lambda Origin Of Replication. Stimulates, Jointly With Grpe, The Atpase Activity Of Dnak. [C]

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001623
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ [H]

EC number: NA

Molecular weight: Translated: 14576; Mature: 14445

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDAVYAYQKDALTGHRPTWKMGAKGDGQPGASAHGAPDPDGMRDPFGFTAEMGGAFRA
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DRPEPDGRIVRTTERRALELMGLEMSAEPAEIKARYKALVKLHHPDANGGDRSSEDRLRS
CCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHH
VIQAYNSLKQAGFC
HHHHHHHHHHCCCC
>Mature Secondary Structure 
SDDAVYAYQKDALTGHRPTWKMGAKGDGQPGASAHGAPDPDGMRDPFGFTAEMGGAFRA
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DRPEPDGRIVRTTERRALELMGLEMSAEPAEIKARYKALVKLHHPDANGGDRSSEDRLRS
CCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHH
VIQAYNSLKQAGFC
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1917840 [H]