Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154245808
Identifier: 154245808
GI number: 154245808
Start: 2099748
End: 2101028
Strand: Direct
Name: 154245808
Synonym: Xaut_1864
Alternate gene names: NA
Gene position: 2099748-2101028 (Clockwise)
Preceding gene: 154245807
Following gene: 154245809
Centisome position: 39.55
GC content: 66.74
Gene sequence:
>1281_bases ATGAAGAAGCTCACCCTGTCCCTCGTCTCGGCGCTGGCGCTCACGGCCGCAGCGCCCGCTCTGGCCCAGTCCATCAACAT CGGCCATCTCGCCGATTATTCCGGCGGCACCTCGGACGTGGGCCAGCCCTACGGGCAGGCCATCCAGGACACCATCGCGT GGATCAACGCCAATGGCGGCGTCAACGGCAAGAAGATCGATTCCGACTTCAACGAATACGGCTACCAGGTGCCCCGCGCG CTCGCCGCCTTCAAGAAGTGGGTGGGCACCAACAAGGTGGTGGCCATCCAGGGCTGGGGCACGGCGGACACCGAGGCCCT CGTGGGCATGGTGACCAAGGAAGAGATTCCCTATTATTCCGGCTCCTACTCCGCCTCTCTCACCGACCCGAAGGGCAAGG TGAACGAGAAGAGCGAGCGGGCCGCGCCGTTCAACTTCTTCTACGGCCCGTCCTATTCGGATGCCGCCCGCGCCATGGTG AAGTGGGCCGCCGACGACTGGAAGGCCAAGGGCAAGCCCGGCAAGCCCAAGTGGGTGCACATGGGCGCCAACCACCCCTT CCCCAACTCGCCCAAGGCGGCGGCCGAGGCCTATGCCAAGGAGCTGGGCTTCGAGGTGCTGGACCCCATCACCTTCGCCC TCACGCCGGGTGACTACACCCCCCAGTGCCTGACGCTGAAGCAGTCGGGCGCCAACTACGCCTATCTCGGCAACACCGCC GGCTCCAACATCTCGGTGCTGAAGGCCTGCAAGACGGCGGGCGTGGACGTACAGTTCTTCGGCAACGTGTGGGGCATGGA CGAGAACGCCGCCAAGGCCGCCGGCGAGGCGGCGAACGGCGTCGTCTTCCCGGTGCGCACCGGCGTCACCTGGGCCGGCA GCGCGCCCGGCATGGCGACCATGAAGGAGATTTCCAAGATCTCCGATCCCTCGGGCACGGCCTATCGCCCGGTGCACTAC CTCGCCGCCGTCTGCACCGCCCTCTACATGAAGGAGGCCATGGAGTGGGCGGACAAGAACGGCGGCGTGACCGGCGTGAA GATCCGCGACGGCATGTACCAGAAGAGCGACTGGGTGCCGAAGGGCACCGAGGGCGTGTGCAATCCCTCCACCTGGACCG CCACCGACCACCGCCCCACCACCCGCGTGGACCTCTACCGCTCGGTGGTGAACGGCGCCACCGACGCCTCGGTGGCGGAC CTGGTGAAGAGCGGCGTCATCAAGCTGGAGAAGGTCGCCACCATCGACCTGCCCCGCAAGACGGAACTGCAGGGCTGGTG A
Upstream 100 bases:
>100_bases TCAAGGCCTATTGGAAGCTCTATCCCTTCTCTTACTGATCAAAAGGACAGAGGCCACGCAGAACGGCCCGTCCAAAACGG AAACCCAAGGAGAGAACAAG
Downstream 100 bases:
>100_bases GGCCCGCCGGGCGGCAGGCGCGGCTGGTGACGGCGGCGCCCGTTTCCTGCGCCCGCCTCCCGAACGAACCGTCATCCCCC GGCCTGACCGGGGGATCCAC
Product: branched-chain amino acid ABC transport system substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MKKLTLSLVSALALTAAAPALAQSINIGHLADYSGGTSDVGQPYGQAIQDTIAWINANGGVNGKKIDSDFNEYGYQVPRA LAAFKKWVGTNKVVAIQGWGTADTEALVGMVTKEEIPYYSGSYSASLTDPKGKVNEKSERAAPFNFFYGPSYSDAARAMV KWAADDWKAKGKPGKPKWVHMGANHPFPNSPKAAAEAYAKELGFEVLDPITFALTPGDYTPQCLTLKQSGANYAYLGNTA GSNISVLKACKTAGVDVQFFGNVWGMDENAAKAAGEAANGVVFPVRTGVTWAGSAPGMATMKEISKISDPSGTAYRPVHY LAAVCTALYMKEAMEWADKNGGVTGVKIRDGMYQKSDWVPKGTEGVCNPSTWTATDHRPTTRVDLYRSVVNGATDASVAD LVKSGVIKLEKVATIDLPRKTELQGW
Sequences:
>Translated_426_residues MKKLTLSLVSALALTAAAPALAQSINIGHLADYSGGTSDVGQPYGQAIQDTIAWINANGGVNGKKIDSDFNEYGYQVPRA LAAFKKWVGTNKVVAIQGWGTADTEALVGMVTKEEIPYYSGSYSASLTDPKGKVNEKSERAAPFNFFYGPSYSDAARAMV KWAADDWKAKGKPGKPKWVHMGANHPFPNSPKAAAEAYAKELGFEVLDPITFALTPGDYTPQCLTLKQSGANYAYLGNTA GSNISVLKACKTAGVDVQFFGNVWGMDENAAKAAGEAANGVVFPVRTGVTWAGSAPGMATMKEISKISDPSGTAYRPVHY LAAVCTALYMKEAMEWADKNGGVTGVKIRDGMYQKSDWVPKGTEGVCNPSTWTATDHRPTTRVDLYRSVVNGATDASVAD LVKSGVIKLEKVATIDLPRKTELQGW >Mature_426_residues MKKLTLSLVSALALTAAAPALAQSINIGHLADYSGGTSDVGQPYGQAIQDTIAWINANGGVNGKKIDSDFNEYGYQVPRA LAAFKKWVGTNKVVAIQGWGTADTEALVGMVTKEEIPYYSGSYSASLTDPKGKVNEKSERAAPFNFFYGPSYSDAARAMV KWAADDWKAKGKPGKPKWVHMGANHPFPNSPKAAAEAYAKELGFEVLDPITFALTPGDYTPQCLTLKQSGANYAYLGNTA GSNISVLKACKTAGVDVQFFGNVWGMDENAAKAAGEAANGVVFPVRTGVTWAGSAPGMATMKEISKISDPSGTAYRPVHY LAAVCTALYMKEAMEWADKNGGVTGVKIRDGMYQKSDWVPKGTEGVCNPSTWTATDHRPTTRVDLYRSVVNGATDASVAD LVKSGVIKLEKVATIDLPRKTELQGW
Specific function: Unknown
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45392; Mature: 45392
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLTLSLVSALALTAAAPALAQSINIGHLADYSGGTSDVGQPYGQAIQDTIAWINANGG CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHEEEECCCC VNGKKIDSDFNEYGYQVPRALAAFKKWVGTNKVVAIQGWGTADTEALVGMVTKEEIPYYS CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC GSYSASLTDPKGKVNEKSERAAPFNFFYGPSYSDAARAMVKWAADDWKAKGKPGKPKWVH CCCEEECCCCCCCCCCCHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEE MGANHPFPNSPKAAAEAYAKELGFEVLDPITFALTPGDYTPQCLTLKQSGANYAYLGNTA ECCCCCCCCCCHHHHHHHHHHHCHHHHCCEEEEECCCCCCCCEEEEECCCCCEEEECCCC GSNISVLKACKTAGVDVQFFGNVWGMDENAAKAAGEAANGVVFPVRTGVTWAGSAPGMAT CCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHCCCCCCCEEEEEECCEEECCCCCCHHH MKEISKISDPSGTAYRPVHYLAAVCTALYMKEAMEWADKNGGVTGVKIRDGMYQKSDWVP HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC KGTEGVCNPSTWTATDHRPTTRVDLYRSVVNGATDASVADLVKSGVIKLEKVATIDLPRK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEHEEEECCCCC TELQGW CCCCCC >Mature Secondary Structure MKKLTLSLVSALALTAAAPALAQSINIGHLADYSGGTSDVGQPYGQAIQDTIAWINANGG CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHEEEECCCC VNGKKIDSDFNEYGYQVPRALAAFKKWVGTNKVVAIQGWGTADTEALVGMVTKEEIPYYS CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC GSYSASLTDPKGKVNEKSERAAPFNFFYGPSYSDAARAMVKWAADDWKAKGKPGKPKWVH CCCEEECCCCCCCCCCCHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEE MGANHPFPNSPKAAAEAYAKELGFEVLDPITFALTPGDYTPQCLTLKQSGANYAYLGNTA ECCCCCCCCCCHHHHHHHHHHHCHHHHCCEEEEECCCCCCCCEEEEECCCCCEEEECCCC GSNISVLKACKTAGVDVQFFGNVWGMDENAAKAAGEAANGVVFPVRTGVTWAGSAPGMAT CCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHCCCCCCCEEEEEECCEEECCCCCCHHH MKEISKISDPSGTAYRPVHYLAAVCTALYMKEAMEWADKNGGVTGVKIRDGMYQKSDWVP HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC KGTEGVCNPSTWTATDHRPTTRVDLYRSVVNGATDASVADLVKSGVIKLEKVATIDLPRK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEHEEEECCCCC TELQGW CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA