Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is nasA [H]
Identifier: 154245027
GI number: 154245027
Start: 1237824
End: 1240517
Strand: Reverse
Name: nasA [H]
Synonym: Xaut_1078
Alternate gene names: 154245027
Gene position: 1240517-1237824 (Counterclockwise)
Preceding gene: 154245028
Following gene: 154245026
Centisome position: 23.37
GC content: 67.56
Gene sequence:
>2694_bases ATGGCGACGGGTGCTGCTCACGACGTGAAGACCACCTGCCCGTATTGCGGCGTCGGCTGCGGCGTGATCGCCACGGTCAC ACCGGACGGGTCGGTTTCGGTGAGCGGCGACCCCGAGCATCCGGCCAATTTCGGCCGGCTCTGCTCGAAAGGCTCGGCGC TGGCCGAGACCATCGATCTGGACGGGCGCCTTCTGCGCCCGCACATCGACGGCCGGCCGGCAGACTGGGACGAGGCCCTC GATCTGGTGGCCGCGCGGTTTGCATCCACCATCGCCGAACACGGCCCGGACTCGGTGGCCTTCTACGTCTCCGGCCAGCT TCTGACCGAGGATTATTACGTCGCCAACAAGCTGATGAAGGGGTTCATCGGCTCCGCCAACATCGACACCAATTCGCGGC TTTGCATGGCCTCGTCCGTGGCCGGCCACCGCCGCGCCTTCGGCACCGACACCGTGCCCGGCAACTATGAAGACCTCGAG CTCGCAGACCTGATCGTGCTGGTGGGCTCGAACCTCGCCTGGTGCCATCCGGTGCTCTACCAGCGCATCGCCGCGGAGAA AGAGCGGCGCCCCTCGCTCAAGATCGTCGTGATCGACCCGCGCCGCACCATGACGGCGGACATCGCCGACATGCATCTGG CGATCTCGCCCGACGGCGACGTGGCGTTGTTCGGCGGCCTTCTGAGCTGGATCGCGAACACCGGTGCGCTCAACTATTCC TATATTTCGAATTTCACGACAGGGGCGGCACAGGCGCTGCGCTTCGGCGCGCAAGACCTCCGGGCGGTCAGTCGAAAGTG CGGCATCGCCCCCTCTCAGCTTATTGAATTTTATTCCCTTTTCACCCGCACCGAGCGCACCGTCACGGTCTACAGCCAGG GCGTCAACCAGTCGGAAACCGGAACCGACAAGGTCAATGCGATCATCAATTGCCATCTGGCCACCGGCCGGATCGGCAAG CCGGGCGCCTCGCCCTTTTCCGTCACCGGCCAGCCCAACGCGATGGGCGGTCGCGAGGTCGGAGGCATGGCCAACATGCT CGCCGCCCATATGGATATCGAGAACGAAACCCATCGCGCGCGGGTTCAACGCTTCTGGCAGGCGCCCACCGTCGCCACGC GGCCGGGCCGCAAGGCCGTGGAGATGTTCGAAGCCATTGGCCAGGGCCACATCAAGGCCGTCTGGATCGCCGGGACCAAC CCGGTGGATTCGATGCCCGAGGCCGACCGTGTCAGGGCGGCGCTTGCCGCCTGCCCCTTCGTCGTGGTCTCCGATGTCCT CGCCGACACCGACACCACGCGCGTAGCCCACGTCCTGCTGCCGGCAGCCGCCTGGGGCGAGAAGGATGGCACGGTCACCA ATTCGGAGCGGCGGATCTCGCGGCAGCGTCCGTTCCTGCCGCTGCCGGGCTCGGCCCGGCCGGATTGGGACATCATGGCC GATGTGGCGCGACGCATGGGCTTTGCCGAAGGCTTTTCCTACACCACCGCCGCCGAGGTCTTTGCCGAACACGCCGCCCT GTCGGCCTTCGAGAATGACGGCGAGCGGGATTTCGACATCGGGGCTCATGCCGGGATCGACGCCGTCGGCTATGAGGCGC TCGCTCCCTTCCAGTGGCCCCAACGCCGCGGGGCGGTCACCGGTACGGAGCGCTTCTTCGCCGCCGGAGGCTTCTTCACG CCGGAGGGCAAGGGACGCTTCGTGGCCCCGCGCGAGGCCCGGGCCGGTACCGGCCCGCTGGCAAGGCTGCCGGCGCAGGA GCCGACCGATCAAGGCTTCATCCTGAACACCGGTCGCGTGCGGGATCACTGGCACACCATGACGCGGACGGGAAAAAGCC CCCGCCTGTCCCAGCACATGGCAGAGCCGTTCGTGGAAATTCATCCGGACGATGCGGTCCAGAGCGGCATCGCGGAAGCG AGCCTCGTGCGGCTGTCCAAGGGTCCGGCGCAGGCCATCGCGCGCGCCCTGATCACCAATCGCCAGCGTCGCGGCTCGGT GTTCGTGCCGATGCACTGGAACGACCGGTTCGCCTCCAACGCCCGCATTGATGCGCTGGTCGATGCCGTCACCGACCCGG TCTCGGGCCAGCCTGCGCTGAAGCAGGCGCGGGCATCGCTGGCCAGTTTCAATGCCGCGGCCTACGGCTTTGCGGTCGTG GCCCGCAAGCCGGCGGACATCCCGGCCGACTATTGGGCGATCGCCAGATGCACCGGCGGCTGGCGGCTGGAACTTGCGTT CGGGCAGGCCAAGGACGACTGGCACGCCTTTGCCCTGCGGCTGTTCGGCGGCGGGGAACATGTGGACATCCTGGCCTACA ACGACGTTGGAGCGGGCCGCTATCGGATCGCGGCGTTCGACGGCGCTGCGCTTCTGGGTGCGCTCTTCATCGCGCCGCAG CCGGTCGGCGTGGCCCGTGGCTGGCTGGTGGAGCAGCTTGCGACCAGCCACGACCTCCAGCGGCAGCGGCTGGCGGTCCT GGCCACCAGGCCCAGCGCCGGCCAATCGGACAAGGGGGCGATCGTGTGCTCCTGCTTCGGGGTGGGAAGCAACGAGATCG CCGCCGCCATTGCCAGCGGGTGTCGCACGGTGAAGGCCGTCGGCGATGCAACGCAGGCCGGTACCAACTGCGGGTCATGT CGGGCCGAGATCAAGGGGATCATCGATGCGAAACATCTCCAGGCAGCCGAGTGA
Upstream 100 bases:
>100_bases ACGGGCGCCGACGAGGGCTCGGTGAAGACCTTCCCGGTGAAGGTCGAGCACGACCAGATCTTCATCGGCCTCGAAGCCGC CATAGCGAAGGTCGCGTGAC
Downstream 100 bases:
>100_bases CCAGGACGCGGCGCGCATCCGCCCGCTCACCGTGCTGCCCGTGTTCCTCGATCTGGCCGGCAAGCGCGCCGTCGTCGCCG GCGGCTCGGCAGCCGCGTGC
Product: molybdopterin oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 897; Mature: 896
Protein sequence:
>897_residues MATGAAHDVKTTCPYCGVGCGVIATVTPDGSVSVSGDPEHPANFGRLCSKGSALAETIDLDGRLLRPHIDGRPADWDEAL DLVAARFASTIAEHGPDSVAFYVSGQLLTEDYYVANKLMKGFIGSANIDTNSRLCMASSVAGHRRAFGTDTVPGNYEDLE LADLIVLVGSNLAWCHPVLYQRIAAEKERRPSLKIVVIDPRRTMTADIADMHLAISPDGDVALFGGLLSWIANTGALNYS YISNFTTGAAQALRFGAQDLRAVSRKCGIAPSQLIEFYSLFTRTERTVTVYSQGVNQSETGTDKVNAIINCHLATGRIGK PGASPFSVTGQPNAMGGREVGGMANMLAAHMDIENETHRARVQRFWQAPTVATRPGRKAVEMFEAIGQGHIKAVWIAGTN PVDSMPEADRVRAALAACPFVVVSDVLADTDTTRVAHVLLPAAAWGEKDGTVTNSERRISRQRPFLPLPGSARPDWDIMA DVARRMGFAEGFSYTTAAEVFAEHAALSAFENDGERDFDIGAHAGIDAVGYEALAPFQWPQRRGAVTGTERFFAAGGFFT PEGKGRFVAPREARAGTGPLARLPAQEPTDQGFILNTGRVRDHWHTMTRTGKSPRLSQHMAEPFVEIHPDDAVQSGIAEA SLVRLSKGPAQAIARALITNRQRRGSVFVPMHWNDRFASNARIDALVDAVTDPVSGQPALKQARASLASFNAAAYGFAVV ARKPADIPADYWAIARCTGGWRLELAFGQAKDDWHAFALRLFGGGEHVDILAYNDVGAGRYRIAAFDGAALLGALFIAPQ PVGVARGWLVEQLATSHDLQRQRLAVLATRPSAGQSDKGAIVCSCFGVGSNEIAAAIASGCRTVKAVGDATQAGTNCGSC RAEIKGIIDAKHLQAAE
Sequences:
>Translated_897_residues MATGAAHDVKTTCPYCGVGCGVIATVTPDGSVSVSGDPEHPANFGRLCSKGSALAETIDLDGRLLRPHIDGRPADWDEAL DLVAARFASTIAEHGPDSVAFYVSGQLLTEDYYVANKLMKGFIGSANIDTNSRLCMASSVAGHRRAFGTDTVPGNYEDLE LADLIVLVGSNLAWCHPVLYQRIAAEKERRPSLKIVVIDPRRTMTADIADMHLAISPDGDVALFGGLLSWIANTGALNYS YISNFTTGAAQALRFGAQDLRAVSRKCGIAPSQLIEFYSLFTRTERTVTVYSQGVNQSETGTDKVNAIINCHLATGRIGK PGASPFSVTGQPNAMGGREVGGMANMLAAHMDIENETHRARVQRFWQAPTVATRPGRKAVEMFEAIGQGHIKAVWIAGTN PVDSMPEADRVRAALAACPFVVVSDVLADTDTTRVAHVLLPAAAWGEKDGTVTNSERRISRQRPFLPLPGSARPDWDIMA DVARRMGFAEGFSYTTAAEVFAEHAALSAFENDGERDFDIGAHAGIDAVGYEALAPFQWPQRRGAVTGTERFFAAGGFFT PEGKGRFVAPREARAGTGPLARLPAQEPTDQGFILNTGRVRDHWHTMTRTGKSPRLSQHMAEPFVEIHPDDAVQSGIAEA SLVRLSKGPAQAIARALITNRQRRGSVFVPMHWNDRFASNARIDALVDAVTDPVSGQPALKQARASLASFNAAAYGFAVV ARKPADIPADYWAIARCTGGWRLELAFGQAKDDWHAFALRLFGGGEHVDILAYNDVGAGRYRIAAFDGAALLGALFIAPQ PVGVARGWLVEQLATSHDLQRQRLAVLATRPSAGQSDKGAIVCSCFGVGSNEIAAAIASGCRTVKAVGDATQAGTNCGSC RAEIKGIIDAKHLQAAE >Mature_896_residues ATGAAHDVKTTCPYCGVGCGVIATVTPDGSVSVSGDPEHPANFGRLCSKGSALAETIDLDGRLLRPHIDGRPADWDEALD LVAARFASTIAEHGPDSVAFYVSGQLLTEDYYVANKLMKGFIGSANIDTNSRLCMASSVAGHRRAFGTDTVPGNYEDLEL ADLIVLVGSNLAWCHPVLYQRIAAEKERRPSLKIVVIDPRRTMTADIADMHLAISPDGDVALFGGLLSWIANTGALNYSY ISNFTTGAAQALRFGAQDLRAVSRKCGIAPSQLIEFYSLFTRTERTVTVYSQGVNQSETGTDKVNAIINCHLATGRIGKP GASPFSVTGQPNAMGGREVGGMANMLAAHMDIENETHRARVQRFWQAPTVATRPGRKAVEMFEAIGQGHIKAVWIAGTNP VDSMPEADRVRAALAACPFVVVSDVLADTDTTRVAHVLLPAAAWGEKDGTVTNSERRISRQRPFLPLPGSARPDWDIMAD VARRMGFAEGFSYTTAAEVFAEHAALSAFENDGERDFDIGAHAGIDAVGYEALAPFQWPQRRGAVTGTERFFAAGGFFTP EGKGRFVAPREARAGTGPLARLPAQEPTDQGFILNTGRVRDHWHTMTRTGKSPRLSQHMAEPFVEIHPDDAVQSGIAEAS LVRLSKGPAQAIARALITNRQRRGSVFVPMHWNDRFASNARIDALVDAVTDPVSGQPALKQARASLASFNAAAYGFAVVA RKPADIPADYWAIARCTGGWRLELAFGQAKDDWHAFALRLFGGGEHVDILAYNDVGAGRYRIAAFDGAALLGALFIAPQP VGVARGWLVEQLATSHDLQRQRLAVLATRPSAGQSDKGAIVCSCFGVGSNEIAAAIASGCRTVKAVGDATQAGTNCGSCR AEIKGIIDAKHLQAAE
Specific function: Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/napA/narB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788534, Length=791, Percent_Identity=28.4450063211125, Blast_Score=298, Evalue=9e-82, Organism=Escherichia coli, GI3868721, Length=680, Percent_Identity=26.3235294117647, Blast_Score=251, Evalue=2e-67, Organism=Escherichia coli, GI3868720, Length=267, Percent_Identity=30.7116104868914, Blast_Score=122, Evalue=1e-28, Organism=Escherichia coli, GI3868719, Length=269, Percent_Identity=27.1375464684015, Blast_Score=112, Evalue=1e-25, Organism=Escherichia coli, GI1787778, Length=368, Percent_Identity=25, Blast_Score=103, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR007419 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 [H]
Pfam domain/function: PF04324 Fer2_BFD; PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.99.4 [H]
Molecular weight: Translated: 95727; Mature: 95596
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGAAHDVKTTCPYCGVGCGVIATVTPDGSVSVSGDPEHPANFGRLCSKGSALAETIDL CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHCCCCHHHHHHCC DGRLLRPHIDGRPADWDEALDLVAARFASTIAEHGPDSVAFYVSGQLLTEDYYVANKLMK CCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEECHHHHHHHHHHH GFIGSANIDTNSRLCMASSVAGHRRAFGTDTVPGNYEDLELADLIVLVGSNLAWCHPVLY HHCCCCCCCCCCCEEEEHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH QRIAAEKERRPSLKIVVIDPRRTMTADIADMHLAISPDGDVALFGGLLSWIANTGALNYS HHHHHHHHCCCCEEEEEECCCCCCEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHH YISNFTTGAAQALRFGAQDLRAVSRKCGIAPSQLIEFYSLFTRTERTVTVYSQGVNQSET HHHCCCHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC GTDKVNAIINCHLATGRIGKPGASPFSVTGQPNAMGGREVGGMANMLAAHMDIENETHRA CCCCEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCHHCHHHHHHHHHCCCCCHHHHH RVQRFWQAPTVATRPGRKAVEMFEAIGQGHIKAVWIAGTNPVDSMPEADRVRAALAACPF HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH VVVSDVLADTDTTRVAHVLLPAAAWGEKDGTVTNSERRISRQRPFLPLPGSARPDWDIMA HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHH DVARRMGFAEGFSYTTAAEVFAEHAALSAFENDGERDFDIGAHAGIDAVGYEALAPFQWP HHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCHHHCCCCCCH QRRGAVTGTERFFAAGGFFTPEGKGRFVAPREARAGTGPLARLPAQEPTDQGFILNTGRV HHCCCCCCCHHHEEECCEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC RDHWHTMTRTGKSPRLSQHMAEPFVEIHPDDAVQSGIAEASLVRLSKGPAQAIARALITN HHHHHHHHHCCCCCCHHHHHHCCCEEECCCHHHHHCCHHHHHHHCCCCHHHHHHHHHHHC RQRRGSVFVPMHWNDRFASNARIDALVDAVTDPVSGQPALKQARASLASFNAAAYGFAVV CCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHEEEEE ARKPADIPADYWAIARCTGGWRLELAFGQAKDDWHAFALRLFGGGEHVDILAYNDVGAGR ECCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCCE YRIAAFDGAALLGALFIAPQPVGVARGWLVEQLATSHDLQRQRLAVLATRPSAGQSDKGA EEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCE IVCSCFGVGSNEIAAAIASGCRTVKAVGDATQAGTNCGSCRAEIKGIIDAKHLQAAE EEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ATGAAHDVKTTCPYCGVGCGVIATVTPDGSVSVSGDPEHPANFGRLCSKGSALAETIDL CCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHCCCCHHHHHHCC DGRLLRPHIDGRPADWDEALDLVAARFASTIAEHGPDSVAFYVSGQLLTEDYYVANKLMK CCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEECHHHHHHHHHHH GFIGSANIDTNSRLCMASSVAGHRRAFGTDTVPGNYEDLELADLIVLVGSNLAWCHPVLY HHCCCCCCCCCCCEEEEHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH QRIAAEKERRPSLKIVVIDPRRTMTADIADMHLAISPDGDVALFGGLLSWIANTGALNYS HHHHHHHHCCCCEEEEEECCCCCCEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHH YISNFTTGAAQALRFGAQDLRAVSRKCGIAPSQLIEFYSLFTRTERTVTVYSQGVNQSET HHHCCCHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC GTDKVNAIINCHLATGRIGKPGASPFSVTGQPNAMGGREVGGMANMLAAHMDIENETHRA CCCCEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCHHCHHHHHHHHHCCCCCHHHHH RVQRFWQAPTVATRPGRKAVEMFEAIGQGHIKAVWIAGTNPVDSMPEADRVRAALAACPF HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH VVVSDVLADTDTTRVAHVLLPAAAWGEKDGTVTNSERRISRQRPFLPLPGSARPDWDIMA HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHH DVARRMGFAEGFSYTTAAEVFAEHAALSAFENDGERDFDIGAHAGIDAVGYEALAPFQWP HHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCHHHCCCCCCH QRRGAVTGTERFFAAGGFFTPEGKGRFVAPREARAGTGPLARLPAQEPTDQGFILNTGRV HHCCCCCCCHHHEEECCEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC RDHWHTMTRTGKSPRLSQHMAEPFVEIHPDDAVQSGIAEASLVRLSKGPAQAIARALITN HHHHHHHHHCCCCCCHHHHHHCCCEEECCCHHHHHCCHHHHHHHCCCCHHHHHHHHHHHC RQRRGSVFVPMHWNDRFASNARIDALVDAVTDPVSGQPALKQARASLASFNAAAYGFAVV CCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHEEEEE ARKPADIPADYWAIARCTGGWRLELAFGQAKDDWHAFALRLFGGGEHVDILAYNDVGAGR ECCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCCE YRIAAFDGAALLGALFIAPQPVGVARGWLVEQLATSHDLQRQRLAVLATRPSAGQSDKGA EEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCE IVCSCFGVGSNEIAAAIASGCRTVKAVGDATQAGTNCGSCRAEIKGIIDAKHLQAAE EEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8468296 [H]