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The map label for this gene is yngJ [H]

Identifier: 154244863

GI number: 154244863

Start: 1024789

End: 1025961

Strand: Direct

Name: yngJ [H]

Synonym: Xaut_0913

Alternate gene names: 154244863

Gene position: 1024789-1025961 (Clockwise)

Preceding gene: 154244862

Following gene: 154244864

Centisome position: 19.3

GC content: 65.13

Gene sequence:

>1173_bases
ATGAATCCGACGGCATATCCAACGGTTTTCGACAATGAAGACCTGACCGCCTTGCGCGACCTCGCCGCCAAGTTTGCCGC
GGAGCGCCTCGCGCCGGGTTATCGGGACCGCGAGCGCACCGGCAGCTTCGGCAAGGATCTGGTGCGCGAGATGGGCAGTC
TCGGCCTGATCGCCCCCGAGCTGCCCGAGGAATTCGGCGGGATCGGCTCCGGCAGCATGTATTCAGGCGTCATCATCGAA
GAGATCGCCAAGGGCGACTTCAACTTCGGCTATGTGAATATACTCGCCTCCCTGAACGGCCAGATCGTCGCCAATTTCGC
TAATCCCGAGATCAAGGGCCACTGGCTGCCCAGGCTCACCGCCGGCGAGATCATGCTGGCCATCGCGCTCACGGAGCCGC
GCGGCGGTTCGGACGCGGCCAATCTCGGCCTCAGGATGGAGCGCTCCGGCGACCACTATGTCCTCAACGGCGAGAAGACC
TCCATCTCCGCCGCCGACCAGGCCGCCGCCGCCATTGTCTTTGCCCGCACGGGCAGGCCCGAGGACAAGGCGCATGGCAT
CTCCGCCATCTTCGTGCCCATGGACACTCCGGGCATCTCGACCACCCGCTTCACCGACGTGGGCCAGCATGCCATCGGCC
GCGGCTCCATCTTCTTCGACAATGTAAAGGTGCCGGCCGATCACTTGCTGGGAGAGGAGAACAAAGGTTTCGTGCAGGTG
ATGCAGGGCTTTGACTTCTCGCGCTCGCTCATCGGCCTGCAATGCCTTGGAACCGCCCGCCAGTCCCTCACCGAGGCCTG
GGCCTATATTGGCGAGCGGCGCGCTTTCGGCAAGCCGCTCGCCGCATTTCAGGGCATCACCCACCAGCTGGCGGATTTCG
ACACCCGCATCGAAGGCGCGCGGCTGCTGAGTTACAACGCGCTGTGGCTCAAGGACAACGGCCTGCCGCACGTGGCCGAG
GCGGCCATGGCCAAATGGTGGCCGCCGCTCCTCGCCTACGAGGCGATCCACGCCTGCCTGCTGGTGCATGGCCACGCCGC
CTATTCCAACGAACTGCCCTTCGAGCAGCGGTTGCGCGACGTGCTGGGCCTGCAGATCGGCGACGGCACCGCGCACATCA
TGAAAAACATCATCGCCCGTGAACGGGCGGGCCGGGCAGCAGTCGGCGGCTGA

Upstream 100 bases:

>100_bases
ATGGCCGGCGCGCCGCGCCGGCGCCGGCCCGCGACACTCAAAGGCTGCGTGAAGGTGGCCACAGCTCAATCCGGCAGGAA
AAGCCAGGGTAGGAAACTCC

Downstream 100 bases:

>100_bases
TCCAAGAATAAGGGGAGGAACCCATGGAATTCGATGCCCTTCTCATCGAGCCGCGCCGCGCCAAAATGGAGGCTGAAGGC
CTCTGGCCGGGCAAGACGCT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MNPTAYPTVFDNEDLTALRDLAAKFAAERLAPGYRDRERTGSFGKDLVREMGSLGLIAPELPEEFGGIGSGSMYSGVIIE
EIAKGDFNFGYVNILASLNGQIVANFANPEIKGHWLPRLTAGEIMLAIALTEPRGGSDAANLGLRMERSGDHYVLNGEKT
SISAADQAAAAIVFARTGRPEDKAHGISAIFVPMDTPGISTTRFTDVGQHAIGRGSIFFDNVKVPADHLLGEENKGFVQV
MQGFDFSRSLIGLQCLGTARQSLTEAWAYIGERRAFGKPLAAFQGITHQLADFDTRIEGARLLSYNALWLKDNGLPHVAE
AAMAKWWPPLLAYEAIHACLLVHGHAAYSNELPFEQRLRDVLGLQIGDGTAHIMKNIIARERAGRAAVGG

Sequences:

>Translated_390_residues
MNPTAYPTVFDNEDLTALRDLAAKFAAERLAPGYRDRERTGSFGKDLVREMGSLGLIAPELPEEFGGIGSGSMYSGVIIE
EIAKGDFNFGYVNILASLNGQIVANFANPEIKGHWLPRLTAGEIMLAIALTEPRGGSDAANLGLRMERSGDHYVLNGEKT
SISAADQAAAAIVFARTGRPEDKAHGISAIFVPMDTPGISTTRFTDVGQHAIGRGSIFFDNVKVPADHLLGEENKGFVQV
MQGFDFSRSLIGLQCLGTARQSLTEAWAYIGERRAFGKPLAAFQGITHQLADFDTRIEGARLLSYNALWLKDNGLPHVAE
AAMAKWWPPLLAYEAIHACLLVHGHAAYSNELPFEQRLRDVLGLQIGDGTAHIMKNIIARERAGRAAVGG
>Mature_390_residues
MNPTAYPTVFDNEDLTALRDLAAKFAAERLAPGYRDRERTGSFGKDLVREMGSLGLIAPELPEEFGGIGSGSMYSGVIIE
EIAKGDFNFGYVNILASLNGQIVANFANPEIKGHWLPRLTAGEIMLAIALTEPRGGSDAANLGLRMERSGDHYVLNGEKT
SISAADQAAAAIVFARTGRPEDKAHGISAIFVPMDTPGISTTRFTDVGQHAIGRGSIFFDNVKVPADHLLGEENKGFVQV
MQGFDFSRSLIGLQCLGTARQSLTEAWAYIGERRAFGKPLAAFQGITHQLADFDTRIEGARLLSYNALWLKDNGLPHVAE
AAMAKWWPPLLAYEAIHACLLVHGHAAYSNELPFEQRLRDVLGLQIGDGTAHIMKNIIARERAGRAAVGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=381, Percent_Identity=35.6955380577428, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI4501859, Length=374, Percent_Identity=32.620320855615, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI4557231, Length=379, Percent_Identity=31.1345646437995, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI187960098, Length=379, Percent_Identity=31.1345646437995, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI4501857, Length=367, Percent_Identity=32.425068119891, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=31.2, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI7656849, Length=377, Percent_Identity=31.2997347480106, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI226958414, Length=340, Percent_Identity=30.8823529411765, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI21361497, Length=374, Percent_Identity=31.283422459893, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI76496475, Length=391, Percent_Identity=28.3887468030691, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI4557235, Length=391, Percent_Identity=28.3887468030691, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI7669494, Length=299, Percent_Identity=29.0969899665552, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI4503943, Length=299, Percent_Identity=29.0969899665552, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI38505218, Length=329, Percent_Identity=30.0911854103343, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI48976061, Length=291, Percent_Identity=28.8659793814433, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI211971008, Length=291, Percent_Identity=28.8659793814433, Blast_Score=93, Evalue=4e-19,
Organism=Escherichia coli, GI87081958, Length=352, Percent_Identity=27.8409090909091, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI1786223, Length=320, Percent_Identity=27.1875, Blast_Score=119, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17506239, Length=376, Percent_Identity=31.6489361702128, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17508101, Length=371, Percent_Identity=32.0754716981132, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17569725, Length=385, Percent_Identity=31.6883116883117, Blast_Score=182, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17570075, Length=380, Percent_Identity=30.7894736842105, Blast_Score=175, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17534899, Length=366, Percent_Identity=30.327868852459, Blast_Score=168, Evalue=5e-42,
Organism=Caenorhabditis elegans, GI17538396, Length=391, Percent_Identity=30.4347826086957, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI71990804, Length=275, Percent_Identity=35.2727272727273, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI17533517, Length=385, Percent_Identity=28.3116883116883, Blast_Score=152, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI17551932, Length=373, Percent_Identity=27.3458445040214, Blast_Score=139, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17505929, Length=390, Percent_Identity=27.4358974358974, Blast_Score=131, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI71985184, Length=344, Percent_Identity=29.0697674418605, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71982178, Length=284, Percent_Identity=27.8169014084507, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI32563615, Length=228, Percent_Identity=31.5789473684211, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17531909, Length=235, Percent_Identity=29.7872340425532, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17534353, Length=378, Percent_Identity=26.984126984127, Blast_Score=100, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI71985192, Length=304, Percent_Identity=29.6052631578947, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17562446, Length=350, Percent_Identity=28.5714285714286, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17531913, Length=175, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24666513, Length=376, Percent_Identity=33.7765957446808, Blast_Score=205, Evalue=5e-53,
Organism=Drosophila melanogaster, GI24646207, Length=369, Percent_Identity=35.5013550135501, Blast_Score=199, Evalue=2e-51,
Organism=Drosophila melanogaster, GI21356377, Length=375, Percent_Identity=35.7333333333333, Blast_Score=199, Evalue=3e-51,
Organism=Drosophila melanogaster, GI24660351, Length=378, Percent_Identity=30.4232804232804, Blast_Score=162, Evalue=4e-40,
Organism=Drosophila melanogaster, GI21355753, Length=378, Percent_Identity=30.6878306878307, Blast_Score=162, Evalue=4e-40,
Organism=Drosophila melanogaster, GI281363737, Length=389, Percent_Identity=26.7352185089974, Blast_Score=122, Evalue=5e-28,
Organism=Drosophila melanogaster, GI19920834, Length=374, Percent_Identity=27.5401069518717, Blast_Score=108, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.-

Molecular weight: Translated: 42146; Mature: 42146

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTAYPTVFDNEDLTALRDLAAKFAAERLAPGYRDRERTGSFGKDLVREMGSLGLIAPE
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCCCCCC
LPEEFGGIGSGSMYSGVIIEEIAKGDFNFGYVNILASLNGQIVANFANPEIKGHWLPRLT
CHHHHCCCCCCCHHCCHHHHHHHCCCCCCHHEEHEECCCCEEEEEECCCCCCCCCCCCCC
AGEIMLAIALTEPRGGSDAANLGLRMERSGDHYVLNGEKTSISAADQAAAAIVFARTGRP
CCCEEEEEEEECCCCCCCHHHCCEEEECCCCEEEECCCCCCCCHHHHHHEEEEEEECCCC
EDKAHGISAIFVPMDTPGISTTRFTDVGQHAIGRGSIFFDNVKVPADHLLGEENKGFVQV
CHHHCCCEEEEEECCCCCCCCCEECHHHHHHCCCCCEEECCCCCCHHHHCCCCCCCHHHH
MQGFDFSRSLIGLQCLGTARQSLTEAWAYIGERRAFGKPLAAFQGITHQLADFDTRIEGA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
RLLSYNALWLKDNGLPHVAEAAMAKWWPPLLAYEAIHACLLVHGHAAYSNELPFEQRLRD
EEEEEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHH
VLGLQIGDGTAHIMKNIIARERAGRAAVGG
HHCEEECCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNPTAYPTVFDNEDLTALRDLAAKFAAERLAPGYRDRERTGSFGKDLVREMGSLGLIAPE
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCCCCCC
LPEEFGGIGSGSMYSGVIIEEIAKGDFNFGYVNILASLNGQIVANFANPEIKGHWLPRLT
CHHHHCCCCCCCHHCCHHHHHHHCCCCCCHHEEHEECCCCEEEEEECCCCCCCCCCCCCC
AGEIMLAIALTEPRGGSDAANLGLRMERSGDHYVLNGEKTSISAADQAAAAIVFARTGRP
CCCEEEEEEEECCCCCCCHHHCCEEEECCCCEEEECCCCCCCCHHHHHHEEEEEEECCCC
EDKAHGISAIFVPMDTPGISTTRFTDVGQHAIGRGSIFFDNVKVPADHLLGEENKGFVQV
CHHHCCCEEEEEECCCCCCCCCEECHHHHHHCCCCCEEECCCCCCHHHHCCCCCCCHHHH
MQGFDFSRSLIGLQCLGTARQSLTEAWAYIGERRAFGKPLAAFQGITHQLADFDTRIEGA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
RLLSYNALWLKDNGLPHVAEAAMAKWWPPLLAYEAIHACLLVHGHAAYSNELPFEQRLRD
EEEEEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHH
VLGLQIGDGTAHIMKNIIARERAGRAAVGG
HHCEEECCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]