BacMap

Definition	Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession	NC_009720
Length	5,308,934

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The map label for this gene is fabG [H]

Identifier: 154244861

GI number: 154244861

Start: 1022889

End: 1023659

Strand: Direct

Name: fabG [H]

Synonym: Xaut_0911

Alternate gene names: 154244861

Gene position: 1022889-1023659 (Clockwise)

Preceding gene: 154244859

Following gene: 154244862

Centisome position: 19.27

GC content: 65.89

Gene sequence:

>771_bases
GTGCGAGGCTTGAAGGGTAAAATAGTTGTTGTAACTGGCGGTGGCGGCGGCATCGGATCGGCAACCTGCCGGCGCTTTGC
CGAGGAAGGCGCCCGCGTCGTGGTCGCCGACATCAGCGCTGCCGCGGCGGAGCGGGTAGCCGAGGAAATCAGAACCGCCG
GTGGCGATGCCACCATCGCGGTCGTCGACCTCACAGATTTCGCAGCGACGGCGGTCAAGGTGGCCGAAGTAGAGAGCGCC
TTCGGTCCCATCGACATCCTGGTCAATAATGCCGGCTGGGACCTGTTCGTGCCGTTCCTGAAGTCGGAGCCCGATTTCTG
GACCAGGATCATCGACATCAACCTGCGCTCGGTGCTGAACATCACCAAGCCAGTGCTCGCCTCCATGGTCGCGCGCGGCG
TTTCCGGACGCGTGGTCTCCATCGGGTCCGATGCCGGGCGCGGCGGCTCCTCCGGCGAAGCGGTCTATGCCGCCTGCAAG
GCCGGGGTCATCGCCTTCATGAAGACGCTCGCCCGCGAGCATGCGCGCAACGGCATCACCTTCAACACCGTGTGCCCGGG
CGTCACCGAGACGGCCATGCTGGAAAGCTTCATGGATGCGGCCGGCGACAAGGAGAAGCTGCGCGTCGCCTTTACCCGCG
CGGTGCCCCTCGGCCGTCTCGGCAAGCCCGACGACCTGCCGGGCGCCATCGTGTTCCTGTCCAGTGACGACGCCGCCTTC
ATCACCGGCCAGGTGATATCGGTCTCCGGCGGCCTCACCATGCACGGTTGA

Upstream 100 bases:

>100_bases
GCGGCGGGCGCCTCAGCGAGAAGCCCCCGCCGGAATAGGCGATAACACACCGAAATATCGGCGCCTTCGCCCCTGCCCAT
GACCGTGGAGGACGACCACC

Downstream 100 bases:

>100_bases
GGGGGAAACCATGAGCTATACTGACATTCTCTATGAGGTGCGCGGCGGCGCCGCCTGGATCACCATCAACCGGCCGGACA
AATACAACGCCTTCCGCGGC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MRGLKGKIVVVTGGGGGIGSATCRRFAEEGARVVVADISAAAAERVAEEIRTAGGDATIAVVDLTDFAATAVKVAEVESA
FGPIDILVNNAGWDLFVPFLKSEPDFWTRIIDINLRSVLNITKPVLASMVARGVSGRVVSIGSDAGRGGSSGEAVYAACK
AGVIAFMKTLAREHARNGITFNTVCPGVTETAMLESFMDAAGDKEKLRVAFTRAVPLGRLGKPDDLPGAIVFLSSDDAAF
ITGQVISVSGGLTMHG

Sequences:

>Translated_256_residues
MRGLKGKIVVVTGGGGGIGSATCRRFAEEGARVVVADISAAAAERVAEEIRTAGGDATIAVVDLTDFAATAVKVAEVESA
FGPIDILVNNAGWDLFVPFLKSEPDFWTRIIDINLRSVLNITKPVLASMVARGVSGRVVSIGSDAGRGGSSGEAVYAACK
AGVIAFMKTLAREHARNGITFNTVCPGVTETAMLESFMDAAGDKEKLRVAFTRAVPLGRLGKPDDLPGAIVFLSSDDAAF
ITGQVISVSGGLTMHG
>Mature_256_residues
MRGLKGKIVVVTGGGGGIGSATCRRFAEEGARVVVADISAAAAERVAEEIRTAGGDATIAVVDLTDFAATAVKVAEVESA
FGPIDILVNNAGWDLFVPFLKSEPDFWTRIIDINLRSVLNITKPVLASMVARGVSGRVVSIGSDAGRGGSSGEAVYAACK
AGVIAFMKTLAREHARNGITFNTVCPGVTETAMLESFMDAAGDKEKLRVAFTRAVPLGRLGKPDDLPGAIVFLSSDDAAF
ITGQVISVSGGLTMHG

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=262, Percent_Identity=33.587786259542, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=32.5301204819277, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI32483357, Length=261, Percent_Identity=34.0996168582375, Blast_Score=110, Evalue=9e-25,
Organism=Homo sapiens, GI66933014, Length=255, Percent_Identity=31.3725490196078, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI40254992, Length=248, Percent_Identity=30.241935483871, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI4504505, Length=208, Percent_Identity=35.0961538461538, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI4758504, Length=267, Percent_Identity=28.8389513108614, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI5031737, Length=248, Percent_Identity=29.0322580645161, Blast_Score=92, Evalue=3e-19,
Organism=Homo sapiens, GI19923817, Length=266, Percent_Identity=29.6992481203008, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI126723750, Length=258, Percent_Identity=31.0077519379845, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI4503301, Length=223, Percent_Identity=30.4932735426009, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI59889578, Length=231, Percent_Identity=30.7359307359307, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI20149619, Length=207, Percent_Identity=28.5024154589372, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI10190704, Length=249, Percent_Identity=27.710843373494, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI210032110, Length=193, Percent_Identity=29.5336787564767, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI40807363, Length=198, Percent_Identity=30.3030303030303, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI31542939, Length=260, Percent_Identity=26.5384615384615, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI83715985, Length=267, Percent_Identity=27.7153558052434, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI109715829, Length=252, Percent_Identity=26.5873015873016, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI142976729, Length=202, Percent_Identity=27.7227722772277, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI7706318, Length=198, Percent_Identity=28.2828282828283, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI4557649, Length=194, Percent_Identity=31.4432989690722, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI157739938, Length=189, Percent_Identity=25.9259259259259, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI166795268, Length=212, Percent_Identity=29.2452830188679, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI33667109, Length=189, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI150247226, Length=209, Percent_Identity=31.5789473684211, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI126723191, Length=191, Percent_Identity=31.9371727748691, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI1787335, Length=251, Percent_Identity=38.2470119521912, Blast_Score=161, Evalue=4e-41,
Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=36.9649805447471, Blast_Score=147, Evalue=4e-37,
Organism=Escherichia coli, GI1790717, Length=249, Percent_Identity=31.7269076305221, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=33.4677419354839, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=29.0322580645161, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=28.515625, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1788459, Length=249, Percent_Identity=26.5060240963855, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI87082160, Length=253, Percent_Identity=29.2490118577075, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786812, Length=256, Percent_Identity=30.078125, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI2367175, Length=253, Percent_Identity=33.596837944664, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI2367365, Length=252, Percent_Identity=32.1428571428571, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787820, Length=229, Percent_Identity=31.0043668122271, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789378, Length=253, Percent_Identity=29.2490118577075, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1787526, Length=253, Percent_Identity=25.6916996047431, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=251, Percent_Identity=35.8565737051793, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI25147288, Length=253, Percent_Identity=32.8063241106719, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17561402, Length=262, Percent_Identity=29.7709923664122, Blast_Score=117, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=34.3873517786561, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17568967, Length=208, Percent_Identity=36.5384615384615, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=32.0158102766798, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=31.6205533596838, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=31.2252964426877, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=31.1538461538462, Blast_Score=103, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI17538182, Length=266, Percent_Identity=31.203007518797, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17508895, Length=198, Percent_Identity=31.8181818181818, Blast_Score=100, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17564282, Length=197, Percent_Identity=31.9796954314721, Blast_Score=100, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17560150, Length=268, Percent_Identity=29.4776119402985, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17561272, Length=252, Percent_Identity=34.1269841269841, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17562904, Length=266, Percent_Identity=29.6992481203008, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17563726, Length=268, Percent_Identity=29.1044776119403, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17562906, Length=266, Percent_Identity=31.5789473684211, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17544670, Length=267, Percent_Identity=29.2134831460674, Blast_Score=97, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=26.8774703557312, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17562908, Length=263, Percent_Identity=30.7984790874525, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI72000259, Length=264, Percent_Identity=28.030303030303, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=28.1954887218045, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17559104, Length=266, Percent_Identity=28.9473684210526, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI193203115, Length=196, Percent_Identity=29.5918367346939, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17538480, Length=271, Percent_Identity=28.7822878228782, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17562990, Length=264, Percent_Identity=28.4090909090909, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI193203117, Length=192, Percent_Identity=30.2083333333333, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17560332, Length=270, Percent_Identity=29.6296296296296, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17551412, Length=276, Percent_Identity=27.8985507246377, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=28.1368821292776, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17565030, Length=265, Percent_Identity=29.811320754717, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=26.3157894736842, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=266, Percent_Identity=26.3157894736842, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=29.1497975708502, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17567345, Length=196, Percent_Identity=26.0204081632653, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17508651, Length=250, Percent_Identity=24.4, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI71982365, Length=208, Percent_Identity=29.3269230769231, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322861, Length=205, Percent_Identity=31.7073170731707, Blast_Score=100, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6324126, Length=257, Percent_Identity=27.2373540856031, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6323882, Length=240, Percent_Identity=29.5833333333333, Blast_Score=80, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6322227, Length=207, Percent_Identity=25.6038647342995, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24639444, Length=252, Percent_Identity=32.1428571428571, Blast_Score=127, Evalue=8e-30,
Organism=Drosophila melanogaster, GI21355319, Length=254, Percent_Identity=30.3149606299213, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=32.6612903225806, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI18859837, Length=193, Percent_Identity=35.7512953367876, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI17737361, Length=264, Percent_Identity=29.1666666666667, Blast_Score=101, Evalue=6e-22,
Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=32.0158102766798, Blast_Score=100, Evalue=8e-22,
Organism=Drosophila melanogaster, GI21357041, Length=256, Percent_Identity=29.296875, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571526, Length=256, Percent_Identity=30.078125, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24643142, Length=257, Percent_Identity=29.9610894941634, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24581726, Length=198, Percent_Identity=31.3131313131313, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI221331218, Length=202, Percent_Identity=33.6633663366337, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24665243, Length=202, Percent_Identity=33.6633663366337, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21358495, Length=194, Percent_Identity=29.3814432989691, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI21355631, Length=175, Percent_Identity=32.5714285714286, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI221331216, Length=203, Percent_Identity=33.4975369458128, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24665247, Length=203, Percent_Identity=33.4975369458128, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24640492, Length=197, Percent_Identity=26.3959390862944, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24649181, Length=199, Percent_Identity=30.1507537688442, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24640442, Length=194, Percent_Identity=29.8969072164948, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24665264, Length=221, Percent_Identity=28.9592760180996, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24584744, Length=193, Percent_Identity=31.0880829015544, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI28574402, Length=193, Percent_Identity=31.0880829015544, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24644337, Length=178, Percent_Identity=29.7752808988764, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007234, Length=209, Percent_Identity=29.6650717703349, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26414; Mature: 26414

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLKGKIVVVTGGGGGIGSATCRRFAEEGARVVVADISAAAAERVAEEIRTAGGDATIA
CCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCEEEE
VVDLTDFAATAVKVAEVESAFGPIDILVNNAGWDLFVPFLKSEPDFWTRIIDINLRSVLN
EEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEHHHCCCCCCEEEEEEECHHHHHH
ITKPVLASMVARGVSGRVVSIGSDAGRGGSSGEAVYAACKAGVIAFMKTLAREHARNGIT
HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FNTVCPGVTETAMLESFMDAAGDKEKLRVAFTRAVPLGRLGKPDDLPGAIVFLSSDDAAF
EECCCCCCHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEE
ITGQVISVSGGLTMHG
EEEEEEEECCCEEECC
>Mature Secondary Structure
MRGLKGKIVVVTGGGGGIGSATCRRFAEEGARVVVADISAAAAERVAEEIRTAGGDATIA
CCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCEEEE
VVDLTDFAATAVKVAEVESAFGPIDILVNNAGWDLFVPFLKSEPDFWTRIIDINLRSVLN
EEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEHHHCCCCCCEEEEEEECHHHHHH
ITKPVLASMVARGVSGRVVSIGSDAGRGGSSGEAVYAACKAGVIAFMKTLAREHARNGIT
HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FNTVCPGVTETAMLESFMDAAGDKEKLRVAFTRAVPLGRLGKPDDLPGAIVFLSSDDAAF
EECCCCCCHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEE
ITGQVISVSGGLTMHG
EEEEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]