Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is trbG [H]
Identifier: 154244692
GI number: 154244692
Start: 828581
End: 829606
Strand: Reverse
Name: trbG [H]
Synonym: Xaut_0741
Alternate gene names: 154244692
Gene position: 829606-828581 (Counterclockwise)
Preceding gene: 154244693
Following gene: 154244691
Centisome position: 15.63
GC content: 65.5
Gene sequence:
>1026_bases ATGAAGCCGTCTTTCCGTAAAGCCGGAAACCCGGCTTCTCGCACTTCCACATTTACGATTCTCTTGCTGTGCACGTCGGC GCTCGCCGGCTGCGCCACGGCGAACAGGCCGCCAGAGATCTCCTATGATGACGCCGTGCCAGCGGCGCTGAGCGCCAATC CTCCGGCTCCCGTGCGCGTGGTCGAGCTGCCGCGACCTCTGCCACTCCCCGGTCAGATGAAGCCCGTCGAGCCGTCCCGC GGCACACCGGAGCCTACCGATCCGACAGCGCGCGTTAATCAGGCCAACGCAGCCGCGCGCGTGCAGCCGGTCCGCGATGG CTTCATCAACGCCATGCAAGTGTATCCCTATACGGGCGGCGCGCTCTATCAGGTCTACACCGCCGTAGGCCAGATCACTG ACATCGCTCTTCAGCCGGGCGAGCAACTGGTCGGCTCCGGCCCGGTCGCCGCCGGCGACACGGTTCGCTGGATCATCGGC GACACGTTGAGCGGCTCGGGCGCGACCCAGCAAGTTCATATCCTGGTGAAACCGACCCGCGCCGACTTGATGACGAATCT CATCATCAACACCAATCTGCGCACCTACCACATGGAGCTGCGCTCGACCGAGCGCACCTATATGGCGTCGGTGTCCTGGC GGTATCCGCAGGATCAGCTTATCGCGCTGCGGCGCCAAAACGCGCAGGCCGAGGCCAGCAGTCCCGTCGCCACCGGCGTT GACCTCGCCAACATCAATTTCCGCTACGCCATCGAGGGTGACCGTGCGCCGTGGCGACCGCTGCGCGCCTACGATGATGG TCGCCAGGTCTTCATCGAGTTTCCGCGCGGCATCGGTCAGGGCGAAATGCCGCCGCTGTTCGTCGTCGGTCCGGAGGGCA ACACCTCCGAACTCGTGAACTACCGCGTCCGCGCCAACTACATGATCGTCGACCGGCTGTTCGCAGCCGCCGAGCTGCGT TTCGGCGCCGGCGACCGCCAGAAGCGCGTCCGCATCGTTCGCACTGACGGGAGGCCGACGTCGTGA
Upstream 100 bases:
>100_bases TCACCATCGTCGTGCAGGTTCCGCGCAACGCCGATCGGCTGCGCGCCAACCCGCTTGGAATCTACGTCAACGCCATCAAC TGGTCACGGGAGCTTGGGCA
Downstream 100 bases:
>100_bases GCGATCCTGAACCCCGGAAAGAGGAAGACGATGCGCCGCTGACCGGGTCGGCCGGCAACGCGGCCGACCCGATGCGGCTC CGTGGTGAGGCGCCGCGTGT
Product: P-type conjugative transfer protein TrbG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKPSFRKAGNPASRTSTFTILLLCTSALAGCATANRPPEISYDDAVPAALSANPPAPVRVVELPRPLPLPGQMKPVEPSR GTPEPTDPTARVNQANAAARVQPVRDGFINAMQVYPYTGGALYQVYTAVGQITDIALQPGEQLVGSGPVAAGDTVRWIIG DTLSGSGATQQVHILVKPTRADLMTNLIINTNLRTYHMELRSTERTYMASVSWRYPQDQLIALRRQNAQAEASSPVATGV DLANINFRYAIEGDRAPWRPLRAYDDGRQVFIEFPRGIGQGEMPPLFVVGPEGNTSELVNYRVRANYMIVDRLFAAAELR FGAGDRQKRVRIVRTDGRPTS
Sequences:
>Translated_341_residues MKPSFRKAGNPASRTSTFTILLLCTSALAGCATANRPPEISYDDAVPAALSANPPAPVRVVELPRPLPLPGQMKPVEPSR GTPEPTDPTARVNQANAAARVQPVRDGFINAMQVYPYTGGALYQVYTAVGQITDIALQPGEQLVGSGPVAAGDTVRWIIG DTLSGSGATQQVHILVKPTRADLMTNLIINTNLRTYHMELRSTERTYMASVSWRYPQDQLIALRRQNAQAEASSPVATGV DLANINFRYAIEGDRAPWRPLRAYDDGRQVFIEFPRGIGQGEMPPLFVVGPEGNTSELVNYRVRANYMIVDRLFAAAELR FGAGDRQKRVRIVRTDGRPTS >Mature_341_residues MKPSFRKAGNPASRTSTFTILLLCTSALAGCATANRPPEISYDDAVPAALSANPPAPVRVVELPRPLPLPGQMKPVEPSR GTPEPTDPTARVNQANAAARVQPVRDGFINAMQVYPYTGGALYQVYTAVGQITDIALQPGEQLVGSGPVAAGDTVRWIIG DTLSGSGATQQVHILVKPTRADLMTNLIINTNLRTYHMELRSTERTYMASVSWRYPQDQLIALRRQNAQAEASSPVATGV DLANINFRYAIEGDRAPWRPLRAYDDGRQVFIEFPRGIGQGEMPPLFVVGPEGNTSELVNYRVRANYMIVDRLFAAAELR FGAGDRQKRVRIVRTDGRPTS
Specific function: Unknown
COG id: COG3504
COG function: function code U; Type IV secretory pathway, VirB9 components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trbG/virB9 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010258 - InterPro: IPR014142 [H]
Pfam domain/function: PF03524 CagX [H]
EC number: NA
Molecular weight: Translated: 37170; Mature: 37170
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPSFRKAGNPASRTSTFTILLLCTSALAGCATANRPPEISYDDAVPAALSANPPAPVRV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCEEE VELPRPLPLPGQMKPVEPSRGTPEPTDPTARVNQANAAARVQPVRDGFINAMQVYPYTGG EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHCCCEEEEEEECCCC ALYQVYTAVGQITDIALQPGEQLVGSGPVAAGDTVRWIIGDTLSGSGATQQVHILVKPTR HHHHHHHHHHHHHEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECHH ADLMTNLIINTNLRTYHMELRSTERTYMASVSWRYPQDQLIALRRQNAQAEASSPVATGV HHHHEEEEEECCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCE DLANINFRYAIEGDRAPWRPLRAYDDGRQVFIEFPRGIGQGEMPPLFVVGPEGNTSELVN EEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHEEE YRVRANYMIVDRLFAAAELRFGAGDRQKRVRIVRTDGRPTS EEEEECEEEEHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MKPSFRKAGNPASRTSTFTILLLCTSALAGCATANRPPEISYDDAVPAALSANPPAPVRV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCEEE VELPRPLPLPGQMKPVEPSRGTPEPTDPTARVNQANAAARVQPVRDGFINAMQVYPYTGG EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHCCCEEEEEEECCCC ALYQVYTAVGQITDIALQPGEQLVGSGPVAAGDTVRWIIGDTLSGSGATQQVHILVKPTR HHHHHHHHHHHHHEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECHH ADLMTNLIINTNLRTYHMELRSTERTYMASVSWRYPQDQLIALRRQNAQAEASSPVATGV HHHHEEEEEECCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCE DLANINFRYAIEGDRAPWRPLRAYDDGRQVFIEFPRGIGQGEMPPLFVVGPEGNTSELVN EEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHEEE YRVRANYMIVDRLFAAAELRFGAGDRQKRVRIVRTDGRPTS EEEEECEEEEHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8763954 [H]