Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is trbG [H]

Identifier: 154244692

GI number: 154244692

Start: 828581

End: 829606

Strand: Reverse

Name: trbG [H]

Synonym: Xaut_0741

Alternate gene names: 154244692

Gene position: 829606-828581 (Counterclockwise)

Preceding gene: 154244693

Following gene: 154244691

Centisome position: 15.63

GC content: 65.5

Gene sequence:

>1026_bases
ATGAAGCCGTCTTTCCGTAAAGCCGGAAACCCGGCTTCTCGCACTTCCACATTTACGATTCTCTTGCTGTGCACGTCGGC
GCTCGCCGGCTGCGCCACGGCGAACAGGCCGCCAGAGATCTCCTATGATGACGCCGTGCCAGCGGCGCTGAGCGCCAATC
CTCCGGCTCCCGTGCGCGTGGTCGAGCTGCCGCGACCTCTGCCACTCCCCGGTCAGATGAAGCCCGTCGAGCCGTCCCGC
GGCACACCGGAGCCTACCGATCCGACAGCGCGCGTTAATCAGGCCAACGCAGCCGCGCGCGTGCAGCCGGTCCGCGATGG
CTTCATCAACGCCATGCAAGTGTATCCCTATACGGGCGGCGCGCTCTATCAGGTCTACACCGCCGTAGGCCAGATCACTG
ACATCGCTCTTCAGCCGGGCGAGCAACTGGTCGGCTCCGGCCCGGTCGCCGCCGGCGACACGGTTCGCTGGATCATCGGC
GACACGTTGAGCGGCTCGGGCGCGACCCAGCAAGTTCATATCCTGGTGAAACCGACCCGCGCCGACTTGATGACGAATCT
CATCATCAACACCAATCTGCGCACCTACCACATGGAGCTGCGCTCGACCGAGCGCACCTATATGGCGTCGGTGTCCTGGC
GGTATCCGCAGGATCAGCTTATCGCGCTGCGGCGCCAAAACGCGCAGGCCGAGGCCAGCAGTCCCGTCGCCACCGGCGTT
GACCTCGCCAACATCAATTTCCGCTACGCCATCGAGGGTGACCGTGCGCCGTGGCGACCGCTGCGCGCCTACGATGATGG
TCGCCAGGTCTTCATCGAGTTTCCGCGCGGCATCGGTCAGGGCGAAATGCCGCCGCTGTTCGTCGTCGGTCCGGAGGGCA
ACACCTCCGAACTCGTGAACTACCGCGTCCGCGCCAACTACATGATCGTCGACCGGCTGTTCGCAGCCGCCGAGCTGCGT
TTCGGCGCCGGCGACCGCCAGAAGCGCGTCCGCATCGTTCGCACTGACGGGAGGCCGACGTCGTGA

Upstream 100 bases:

>100_bases
TCACCATCGTCGTGCAGGTTCCGCGCAACGCCGATCGGCTGCGCGCCAACCCGCTTGGAATCTACGTCAACGCCATCAAC
TGGTCACGGGAGCTTGGGCA

Downstream 100 bases:

>100_bases
GCGATCCTGAACCCCGGAAAGAGGAAGACGATGCGCCGCTGACCGGGTCGGCCGGCAACGCGGCCGACCCGATGCGGCTC
CGTGGTGAGGCGCCGCGTGT

Product: P-type conjugative transfer protein TrbG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MKPSFRKAGNPASRTSTFTILLLCTSALAGCATANRPPEISYDDAVPAALSANPPAPVRVVELPRPLPLPGQMKPVEPSR
GTPEPTDPTARVNQANAAARVQPVRDGFINAMQVYPYTGGALYQVYTAVGQITDIALQPGEQLVGSGPVAAGDTVRWIIG
DTLSGSGATQQVHILVKPTRADLMTNLIINTNLRTYHMELRSTERTYMASVSWRYPQDQLIALRRQNAQAEASSPVATGV
DLANINFRYAIEGDRAPWRPLRAYDDGRQVFIEFPRGIGQGEMPPLFVVGPEGNTSELVNYRVRANYMIVDRLFAAAELR
FGAGDRQKRVRIVRTDGRPTS

Sequences:

>Translated_341_residues
MKPSFRKAGNPASRTSTFTILLLCTSALAGCATANRPPEISYDDAVPAALSANPPAPVRVVELPRPLPLPGQMKPVEPSR
GTPEPTDPTARVNQANAAARVQPVRDGFINAMQVYPYTGGALYQVYTAVGQITDIALQPGEQLVGSGPVAAGDTVRWIIG
DTLSGSGATQQVHILVKPTRADLMTNLIINTNLRTYHMELRSTERTYMASVSWRYPQDQLIALRRQNAQAEASSPVATGV
DLANINFRYAIEGDRAPWRPLRAYDDGRQVFIEFPRGIGQGEMPPLFVVGPEGNTSELVNYRVRANYMIVDRLFAAAELR
FGAGDRQKRVRIVRTDGRPTS
>Mature_341_residues
MKPSFRKAGNPASRTSTFTILLLCTSALAGCATANRPPEISYDDAVPAALSANPPAPVRVVELPRPLPLPGQMKPVEPSR
GTPEPTDPTARVNQANAAARVQPVRDGFINAMQVYPYTGGALYQVYTAVGQITDIALQPGEQLVGSGPVAAGDTVRWIIG
DTLSGSGATQQVHILVKPTRADLMTNLIINTNLRTYHMELRSTERTYMASVSWRYPQDQLIALRRQNAQAEASSPVATGV
DLANINFRYAIEGDRAPWRPLRAYDDGRQVFIEFPRGIGQGEMPPLFVVGPEGNTSELVNYRVRANYMIVDRLFAAAELR
FGAGDRQKRVRIVRTDGRPTS

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014142 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 37170; Mature: 37170

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSFRKAGNPASRTSTFTILLLCTSALAGCATANRPPEISYDDAVPAALSANPPAPVRV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCEEE
VELPRPLPLPGQMKPVEPSRGTPEPTDPTARVNQANAAARVQPVRDGFINAMQVYPYTGG
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHCCCEEEEEEECCCC
ALYQVYTAVGQITDIALQPGEQLVGSGPVAAGDTVRWIIGDTLSGSGATQQVHILVKPTR
HHHHHHHHHHHHHEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECHH
ADLMTNLIINTNLRTYHMELRSTERTYMASVSWRYPQDQLIALRRQNAQAEASSPVATGV
HHHHEEEEEECCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCE
DLANINFRYAIEGDRAPWRPLRAYDDGRQVFIEFPRGIGQGEMPPLFVVGPEGNTSELVN
EEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHEEE
YRVRANYMIVDRLFAAAELRFGAGDRQKRVRIVRTDGRPTS
EEEEECEEEEHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKPSFRKAGNPASRTSTFTILLLCTSALAGCATANRPPEISYDDAVPAALSANPPAPVRV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCEEE
VELPRPLPLPGQMKPVEPSRGTPEPTDPTARVNQANAAARVQPVRDGFINAMQVYPYTGG
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHCCCEEEEEEECCCC
ALYQVYTAVGQITDIALQPGEQLVGSGPVAAGDTVRWIIGDTLSGSGATQQVHILVKPTR
HHHHHHHHHHHHHEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECHH
ADLMTNLIINTNLRTYHMELRSTERTYMASVSWRYPQDQLIALRRQNAQAEASSPVATGV
HHHHEEEEEECCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCE
DLANINFRYAIEGDRAPWRPLRAYDDGRQVFIEFPRGIGQGEMPPLFVVGPEGNTSELVN
EEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHEEE
YRVRANYMIVDRLFAAAELRFGAGDRQKRVRIVRTDGRPTS
EEEEECEEEEHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]