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The map label for this gene is trbI [H]

Identifier: 154244691

GI number: 154244691

Start: 827379

End: 828584

Strand: Reverse

Name: trbI [H]

Synonym: Xaut_0740

Alternate gene names: 154244691

Gene position: 828584-827379 (Counterclockwise)

Preceding gene: 154244692

Following gene: 154244690

Centisome position: 15.61

GC content: 67.58

Gene sequence:

>1206_bases
GTGAGCGATCCTGAACCCCGGAAAGAGGAAGACGATGCGCCGCTGACCGGGTCGGCCGGCAACGCGGCCGACCCGATGCG
GCTCCGTGGTGAGGCGCCGCGTGTCACGCGGCTCTCGCGTAACGTGCTCGCTGGCATCGGACTCGTGGCGAGCGTCGGCA
TCGGCGGCGCCTTAGTCTATGCGCTCCAAACCCGCGACGCGGGAAGACCGGCGGACGAACTTTACTCGACCGACAATCGG
TCGACCGCCGATGGCCTGGCCGGATTGCCACGCGATTACAGCGGAATTCCCCAGCTCGGTCCGCCGCTCCCGGGCGACCT
CGGGCGACCCATCCTGGGCGCGCAAAGTCGTGGCCAGCCACTGCCGAACCAGCCCAACCCCGGCATCAGCGCGGAGGAGC
AGCGCCGGCTGCAAGAAATAGAGACCGCCCGGGTCAGCAGGCTGTTCAGCGGCTCCGAGAACCGGCCCATGGCCTCGACA
GGCCCCGGCGCCGCGACGATCGCGCCGCCGCCGGCGCCTGACCTCACTGGCCTCGGCCTCGCGCCACCACCCGCCACCCC
ATCGCCCCAGGATCGCCAGCTCGCATTCCTCAATGCGGCCGCCGATCGGCGCACCGTCGCACCCGATCGCGTCGCCGCAC
CGGCGTCGCCTTACATCCTTCAGGCAGGTGCGGTGATCGCAGCAGCGCTCCTTACTGGCATCCACTCGGATCTCCCGGGC
CAGATCACGGCGCAAGTGACGGAGAATATCTACGACAGCCCGACAGGCCGCATTCTTCTAGTGCCCCAAGGCACACGCGT
AATCGGGCAATACAACAACAGCGTTCAGTTCGGTCAGAGCCGCGTGCTGCTGATCTGGAACCGGCTGATCTTCCCGAACG
GACGCTCCATTGTGCTCGAGCGTCAGCCCGGCGCAGACGTTGAAGGCTACGCGGGCTTGCAAGACGGCGTCGACTACCAT
TGGTGGGATCTCGCAAAGGCGGCCGGCCTCTCGACGCTGCTGAGCGTCGGCGCTGAGCTCGCGACCAATGACGACGACCG
CTTGATCCAGGCGATACGCAACGGCGGCCAGGACACCATCAACGATGCCGGCCAGCAGATCATCCGCCGGCAGCTCAACG
TCGCGCCGACGCTGACCATCCGGCCCGGCTTCCCGGTCCGCGTGATCATCACGCGGGACTTGGTGCTCGAACCCTACGGA
GGCTAG

Upstream 100 bases:

>100_bases
TGATCGTCGACCGGCTGTTCGCAGCCGCCGAGCTGCGTTTCGGCGCCGGCGACCGCCAGAAGCGCGTCCGCATCGTTCGC
ACTGACGGGAGGCCGACGTC

Downstream 100 bases:

>100_bases
CCAATGGCCAAGCTAAAGCTCGGAGCGATCGAAGACGACAAGCCGGTGAAGATCTCGGTGGAACTGCCCGCCGCCCTTCA
CCGCGATCTCCTCGCCTATG

Product: conjugation TrbI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MSDPEPRKEEDDAPLTGSAGNAADPMRLRGEAPRVTRLSRNVLAGIGLVASVGIGGALVYALQTRDAGRPADELYSTDNR
STADGLAGLPRDYSGIPQLGPPLPGDLGRPILGAQSRGQPLPNQPNPGISAEEQRRLQEIETARVSRLFSGSENRPMAST
GPGAATIAPPPAPDLTGLGLAPPPATPSPQDRQLAFLNAAADRRTVAPDRVAAPASPYILQAGAVIAAALLTGIHSDLPG
QITAQVTENIYDSPTGRILLVPQGTRVIGQYNNSVQFGQSRVLLIWNRLIFPNGRSIVLERQPGADVEGYAGLQDGVDYH
WWDLAKAAGLSTLLSVGAELATNDDDRLIQAIRNGGQDTINDAGQQIIRRQLNVAPTLTIRPGFPVRVIITRDLVLEPYG
G

Sequences:

>Translated_401_residues
MSDPEPRKEEDDAPLTGSAGNAADPMRLRGEAPRVTRLSRNVLAGIGLVASVGIGGALVYALQTRDAGRPADELYSTDNR
STADGLAGLPRDYSGIPQLGPPLPGDLGRPILGAQSRGQPLPNQPNPGISAEEQRRLQEIETARVSRLFSGSENRPMAST
GPGAATIAPPPAPDLTGLGLAPPPATPSPQDRQLAFLNAAADRRTVAPDRVAAPASPYILQAGAVIAAALLTGIHSDLPG
QITAQVTENIYDSPTGRILLVPQGTRVIGQYNNSVQFGQSRVLLIWNRLIFPNGRSIVLERQPGADVEGYAGLQDGVDYH
WWDLAKAAGLSTLLSVGAELATNDDDRLIQAIRNGGQDTINDAGQQIIRRQLNVAPTLTIRPGFPVRVIITRDLVLEPYG
G
>Mature_400_residues
SDPEPRKEEDDAPLTGSAGNAADPMRLRGEAPRVTRLSRNVLAGIGLVASVGIGGALVYALQTRDAGRPADELYSTDNRS
TADGLAGLPRDYSGIPQLGPPLPGDLGRPILGAQSRGQPLPNQPNPGISAEEQRRLQEIETARVSRLFSGSENRPMASTG
PGAATIAPPPAPDLTGLGLAPPPATPSPQDRQLAFLNAAADRRTVAPDRVAAPASPYILQAGAVIAAALLTGIHSDLPGQ
ITAQVTENIYDSPTGRILLVPQGTRVIGQYNNSVQFGQSRVLLIWNRLIFPNGRSIVLERQPGADVEGYAGLQDGVDYHW
WDLAKAAGLSTLLSVGAELATNDDDRLIQAIRNGGQDTINDAGQQIIRRQLNVAPTLTIRPGFPVRVIITRDLVLEPYGG

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 42315; Mature: 42184

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPEPRKEEDDAPLTGSAGNAADPMRLRGEAPRVTRLSRNVLAGIGLVASVGIGGALVY
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
ALQTRDAGRPADELYSTDNRSTADGLAGLPRDYSGIPQLGPPLPGDLGRPILGAQSRGQP
EEECCCCCCCHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LPNQPNPGISAEEQRRLQEIETARVSRLFSGSENRPMASTGPGAATIAPPPAPDLTGLGL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
APPPATPSPQDRQLAFLNAAADRRTVAPDRVAAPASPYILQAGAVIAAALLTGIHSDLPG
CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCC
QITAQVTENIYDSPTGRILLVPQGTRVIGQYNNSVQFGQSRVLLIWNRLIFPNGRSIVLE
HHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCEECCCCEEEEEEEEEECCCCCEEEEE
RQPGADVEGYAGLQDGVDYHWWDLAKAAGLSTLLSVGAELATNDDDRLIQAIRNGGQDTI
CCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHCCCCHHH
NDAGQQIIRRQLNVAPTLTIRPGFPVRVIITRDLVLEPYGG
HHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECEEECCCCC
>Mature Secondary Structure 
SDPEPRKEEDDAPLTGSAGNAADPMRLRGEAPRVTRLSRNVLAGIGLVASVGIGGALVY
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
ALQTRDAGRPADELYSTDNRSTADGLAGLPRDYSGIPQLGPPLPGDLGRPILGAQSRGQP
EEECCCCCCCHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LPNQPNPGISAEEQRRLQEIETARVSRLFSGSENRPMASTGPGAATIAPPPAPDLTGLGL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
APPPATPSPQDRQLAFLNAAADRRTVAPDRVAAPASPYILQAGAVIAAALLTGIHSDLPG
CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCC
QITAQVTENIYDSPTGRILLVPQGTRVIGQYNNSVQFGQSRVLLIWNRLIFPNGRSIVLE
HHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCEECCCCEEEEEEEEEECCCCCEEEEE
RQPGADVEGYAGLQDGVDYHWWDLAKAAGLSTLLSVGAELATNDDDRLIQAIRNGGQDTI
CCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHCCCCHHH
NDAGQQIIRRQLNVAPTLTIRPGFPVRVIITRDLVLEPYGG
HHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]