Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is trbG [H]
Identifier: 154244642
GI number: 154244642
Start: 781169
End: 782185
Strand: Reverse
Name: trbG [H]
Synonym: Xaut_0691
Alternate gene names: 154244642
Gene position: 782185-781169 (Counterclockwise)
Preceding gene: 154244643
Following gene: 154244641
Centisome position: 14.73
GC content: 68.44
Gene sequence:
>1017_bases ATGACCCGCACGCCGATCCGTAAGTCCGGCTTTCCGGCTTTCCGCAAACCCGCGATCTTGGCCTTGCTGGCCGCGACGGC GCTGGCTGGATGTGCCACCAATCGGGTTCCTCAGTTCAGCTACGATGCCGACGTGCCGCCGCTGCCCGTCGTGCAGGCAC CTGTCACCGATGAGCGGCCGCGCCCGCTGCACACGCCTCCCTCCTGGAACGTGGCACGGGGCGGTGCAGCCGCAGGCACG CCGGCGGGACGGGTGGAGAACGCCAATGCCGCCGCCCGCGTCGAACCGCGCCGCGAGGGCTATTACAATGCCATCCAGAT TTACCCGTGGTCCGAGGGCGCTCTCTATCAGGTCTATGCGGCGCCGGGGCAGGTCACCAATATCGCCCTGGAGCCAGGTG AGGGCCTGACCGGCGCCGGTCCGATCGCGGCGGGCGATACCGCACGATGGATCATCGGCGATACCGAGAGCGGAAGCGGT GCGCACCGGCGTGTTCATGTGCTGGTAAAGCCGACGCGGCCGGACATCTCGACCAACCTCGTCATCACCACCGACCGGCG CATCTACATGATCGAGCTGCGCGCCCGCGAGGAGCTCTACATGCCTGCCGTCGCTTGGGCCTATCCCGCGCCACCGGCGG GGCAGCGTCGGTCGGTCCCGGCCGCACCCGTCATCCCGGCCGAGGCGGCGCGCAACTATCGCTACGGCCTGACCGGCGAC AGCCCGCCATGGCGGCCGATCTCGGTCTTCGACGATGGTCGGCGCGTCTACGTCGTCTTCCCGCGCGGTATCGTCCAGGG CGAGATGCCGCCGATCTTCGTGCTCGGCTCGGATGGCGAGCCGCAGATCGTCAACAGCCGCATCCACCAGAACATCCTTA TCGTCGACCGCCTGTTCGGTGCAGCCGAGCTTCGCCTTGGAAGTGGCGAGCGCCAACAGACCGTCCGGATCGTCCGGATC GAACAGCGGCAGGCCGCCGCCCAGCCCGCCCGCGATACCGGAGACTCGCCATCATGA
Upstream 100 bases:
>100_bases TGACCATCGTGATCCAGACACCGCGTGACGCCGAACGGCTGCGTGCCAATCCGCTCGGAATCTACGTCAACGCCATCAAC TGGTCGCGGGAGATGAGCCA
Downstream 100 bases:
>100_bases CCGAGGACAGAGCCACCACTACCAGCACGGACGCCGCCGCGCCCATGCGGCTGCACGCCGATCCGCCCCGTGTCACGCGA CTTTCCCGCAAGATGCTCGC
Product: P-type conjugative transfer protein TrbG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTRTPIRKSGFPAFRKPAILALLAATALAGCATNRVPQFSYDADVPPLPVVQAPVTDERPRPLHTPPSWNVARGGAAAGT PAGRVENANAAARVEPRREGYYNAIQIYPWSEGALYQVYAAPGQVTNIALEPGEGLTGAGPIAAGDTARWIIGDTESGSG AHRRVHVLVKPTRPDISTNLVITTDRRIYMIELRAREELYMPAVAWAYPAPPAGQRRSVPAAPVIPAEAARNYRYGLTGD SPPWRPISVFDDGRRVYVVFPRGIVQGEMPPIFVLGSDGEPQIVNSRIHQNILIVDRLFGAAELRLGSGERQQTVRIVRI EQRQAAAQPARDTGDSPS
Sequences:
>Translated_338_residues MTRTPIRKSGFPAFRKPAILALLAATALAGCATNRVPQFSYDADVPPLPVVQAPVTDERPRPLHTPPSWNVARGGAAAGT PAGRVENANAAARVEPRREGYYNAIQIYPWSEGALYQVYAAPGQVTNIALEPGEGLTGAGPIAAGDTARWIIGDTESGSG AHRRVHVLVKPTRPDISTNLVITTDRRIYMIELRAREELYMPAVAWAYPAPPAGQRRSVPAAPVIPAEAARNYRYGLTGD SPPWRPISVFDDGRRVYVVFPRGIVQGEMPPIFVLGSDGEPQIVNSRIHQNILIVDRLFGAAELRLGSGERQQTVRIVRI EQRQAAAQPARDTGDSPS >Mature_337_residues TRTPIRKSGFPAFRKPAILALLAATALAGCATNRVPQFSYDADVPPLPVVQAPVTDERPRPLHTPPSWNVARGGAAAGTP AGRVENANAAARVEPRREGYYNAIQIYPWSEGALYQVYAAPGQVTNIALEPGEGLTGAGPIAAGDTARWIIGDTESGSGA HRRVHVLVKPTRPDISTNLVITTDRRIYMIELRAREELYMPAVAWAYPAPPAGQRRSVPAAPVIPAEAARNYRYGLTGDS PPWRPISVFDDGRRVYVVFPRGIVQGEMPPIFVLGSDGEPQIVNSRIHQNILIVDRLFGAAELRLGSGERQQTVRIVRIE QRQAAAQPARDTGDSPS
Specific function: Unknown
COG id: COG3504
COG function: function code U; Type IV secretory pathway, VirB9 components
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trbG/virB9 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010258 - InterPro: IPR014142 [H]
Pfam domain/function: PF03524 CagX [H]
EC number: NA
Molecular weight: Translated: 36569; Mature: 36438
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTPIRKSGFPAFRKPAILALLAATALAGCATNRVPQFSYDADVPPLPVVQAPVTDERP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCC RPLHTPPSWNVARGGAAAGTPAGRVENANAAARVEPRREGYYNAIQIYPWSEGALYQVYA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCEEEEEEECCCCCEEEEEE APGQVTNIALEPGEGLTGAGPIAAGDTARWIIGDTESGSGAHRRVHVLVKPTRPDISTNL CCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEE VITTDRRIYMIELRAREELYMPAVAWAYPAPPAGQRRSVPAAPVIPAEAARNYRYGLTGD EEEECCEEEEEEEECCCHHCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCEECCCCCC SPPWRPISVFDDGRRVYVVFPRGIVQGEMPPIFVLGSDGEPQIVNSRIHQNILIVDRLFG CCCCCEEEEEECCCEEEEECCCCEECCCCCCEEEECCCCCCHHHHHHHHCCEEEEEECCC AAELRLGSGERQQTVRIVRIEQRQAAAQPARDTGDSPS EEEEEECCCCCCEEEEEEEEECHHHHCCCCCCCCCCCC >Mature Secondary Structure TRTPIRKSGFPAFRKPAILALLAATALAGCATNRVPQFSYDADVPPLPVVQAPVTDERP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCC RPLHTPPSWNVARGGAAAGTPAGRVENANAAARVEPRREGYYNAIQIYPWSEGALYQVYA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCEEEEEEECCCCCEEEEEE APGQVTNIALEPGEGLTGAGPIAAGDTARWIIGDTESGSGAHRRVHVLVKPTRPDISTNL CCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEE VITTDRRIYMIELRAREELYMPAVAWAYPAPPAGQRRSVPAAPVIPAEAARNYRYGLTGD EEEECCEEEEEEEECCCHHCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCEECCCCCC SPPWRPISVFDDGRRVYVVFPRGIVQGEMPPIFVLGSDGEPQIVNSRIHQNILIVDRLFG CCCCCEEEEEECCCEEEEECCCCEECCCCCCEEEECCCCCCHHHHHHHHCCEEEEEECCC AAELRLGSGERQQTVRIVRIEQRQAAAQPARDTGDSPS EEEEEECCCCCCEEEEEEEEECHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]