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The map label for this gene is trbI [H]

Identifier: 154244641

GI number: 154244641

Start: 780021

End: 781172

Strand: Reverse

Name: trbI [H]

Synonym: Xaut_0690

Alternate gene names: 154244641

Gene position: 781172-780021 (Counterclockwise)

Preceding gene: 154244642

Following gene: 154244640

Centisome position: 14.71

GC content: 67.36

Gene sequence:

>1152_bases
ATGACCGAGGACAGAGCCACCACTACCAGCACGGACGCCGCCGCGCCCATGCGGCTGCACGCCGATCCGCCCCGTGTCAC
GCGACTTTCCCGCAAGATGCTCGCCAGCGTCGGCGCCGTTGCGTTGCTCGGCATCGGCGGGGCGCTTGTCTACGCCCTCC
AGACCCGAGACATGGGGACGAGCGGCGAAGAGCTCTATTCGACCGATAACCGGCCCACCGCCGATGGCCTGTCCGGCCTG
CCGAGGGATTATACCGGCCCGGTCCTTGGACCGCCTTTGCCAGGTGATCTCGGCGGCCCGATCCTCGATGCGCAAAACCG
GGGACAGCCGGTCGCACCGCCTGTCGTGGCGGCGCCGGCCGTCGACCCGGAGGAGCAGCGCCGGCTTGCCGAGGAAGAAG
CGGCGCGCCTCAGCCGCGTTTTCTTCCAAACCGGTCCGGGCACGGCAACTGCCACCGGAGGTCCGGGACTGGCCGGTCTC
GGCCTTGGCTCGCAAACCGGCGCGACGGCCGGACAGGATCGGCACACGGCTTTCCTCAACGGCCCTGTGGATCGCCAGAC
CGTTGCGCTCGATCGCATCATGGCGCCGGCGTCGCCCTACATCCTTCAGGCGGGAGCTGTTATCCCGGCCGCGATGATCA
CCGGCATCCGGTCCGATCTGCCCGGACAGATCACCGCCCAGGTCACGGAGAACGTCTATGACAGCCCGACCGGAAGCCTG
CTCCTCATCCCGCAAGGCACCCGCATTATCGGGCAATACGATGCCGGCGTGACCTCTGGCCAGCGACGCGTCCTGCTCGT
CTGGAACCGTCTGATCCTGCCCAATGGCCGCTCCATCGTGCTGGAACGTCAGCCCGGTGCGGATGCCAGCGGCTTTGCCG
GTCTTGAAGATGGCGTCGATTACCACTGGTGGGATCTGATGAAGGCAGCGGGGTTATCGACCCTGCTTGCGGTGGGGACG
GAGCTCGCCACCAGCGACGAGGATCGCCTGATCCGCGCCATCCGCGATGGGGCGCAGGACACCATCAATCAGGCCGGCCA
GCAGATCATCCAGCGCCAGTTGCAGGTTGCGCCGACGCTCACCGTCCGGCCGGGCTTCCCGGTCAGGGTGATCGTCACCC
GCGACCTCGTTCTCGAACCCTACAGGAGTTGA

Upstream 100 bases:

>100_bases
GCCTTGGAAGTGGCGAGCGCCAACAGACCGTCCGGATCGTCCGGATCGAACAGCGGCAGGCCGCCGCCCAGCCCGCCCGC
GATACCGGAGACTCGCCATC

Downstream 100 bases:

>100_bases
CCATGGCGAAGCTGAAACTCGGACCCATCGTCGAGGACAGAGCGGTCAAGGTAACGGTGGAACTGCCCGGACCGCTTCAT
CGCGATCTCGTCGCTTATGC

Product: conjugation TrbI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MTEDRATTTSTDAAAPMRLHADPPRVTRLSRKMLASVGAVALLGIGGALVYALQTRDMGTSGEELYSTDNRPTADGLSGL
PRDYTGPVLGPPLPGDLGGPILDAQNRGQPVAPPVVAAPAVDPEEQRRLAEEEAARLSRVFFQTGPGTATATGGPGLAGL
GLGSQTGATAGQDRHTAFLNGPVDRQTVALDRIMAPASPYILQAGAVIPAAMITGIRSDLPGQITAQVTENVYDSPTGSL
LLIPQGTRIIGQYDAGVTSGQRRVLLVWNRLILPNGRSIVLERQPGADASGFAGLEDGVDYHWWDLMKAAGLSTLLAVGT
ELATSDEDRLIRAIRDGAQDTINQAGQQIIQRQLQVAPTLTVRPGFPVRVIVTRDLVLEPYRS

Sequences:

>Translated_383_residues
MTEDRATTTSTDAAAPMRLHADPPRVTRLSRKMLASVGAVALLGIGGALVYALQTRDMGTSGEELYSTDNRPTADGLSGL
PRDYTGPVLGPPLPGDLGGPILDAQNRGQPVAPPVVAAPAVDPEEQRRLAEEEAARLSRVFFQTGPGTATATGGPGLAGL
GLGSQTGATAGQDRHTAFLNGPVDRQTVALDRIMAPASPYILQAGAVIPAAMITGIRSDLPGQITAQVTENVYDSPTGSL
LLIPQGTRIIGQYDAGVTSGQRRVLLVWNRLILPNGRSIVLERQPGADASGFAGLEDGVDYHWWDLMKAAGLSTLLAVGT
ELATSDEDRLIRAIRDGAQDTINQAGQQIIQRQLQVAPTLTVRPGFPVRVIVTRDLVLEPYRS
>Mature_382_residues
TEDRATTTSTDAAAPMRLHADPPRVTRLSRKMLASVGAVALLGIGGALVYALQTRDMGTSGEELYSTDNRPTADGLSGLP
RDYTGPVLGPPLPGDLGGPILDAQNRGQPVAPPVVAAPAVDPEEQRRLAEEEAARLSRVFFQTGPGTATATGGPGLAGLG
LGSQTGATAGQDRHTAFLNGPVDRQTVALDRIMAPASPYILQAGAVIPAAMITGIRSDLPGQITAQVTENVYDSPTGSLL
LIPQGTRIIGQYDAGVTSGQRRVLLVWNRLILPNGRSIVLERQPGADASGFAGLEDGVDYHWWDLMKAAGLSTLLAVGTE
LATSDEDRLIRAIRDGAQDTINQAGQQIIQRQLQVAPTLTVRPGFPVRVIVTRDLVLEPYRS

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 40296; Mature: 40165

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEDRATTTSTDAAAPMRLHADPPRVTRLSRKMLASVGAVALLGIGGALVYALQTRDMGT
CCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCCCC
SGEELYSTDNRPTADGLSGLPRDYTGPVLGPPLPGDLGGPILDAQNRGQPVAPPVVAAPA
CCHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEECCC
VDPEEQRRLAEEEAARLSRVFFQTGPGTATATGGPGLAGLGLGSQTGATAGQDRHTAFLN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEECCCCCCCCCCCCCCCCEEEEC
GPVDRQTVALDRIMAPASPYILQAGAVIPAAMITGIRSDLPGQITAQVTENVYDSPTGSL
CCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCE
LLIPQGTRIIGQYDAGVTSGQRRVLLVWNRLILPNGRSIVLERQPGADASGFAGLEDGVD
EEEECCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCC
YHWWDLMKAAGLSTLLAVGTELATSDEDRLIRAIRDGAQDTINQAGQQIIQRQLQVAPTL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEE
TVRPGFPVRVIVTRDLVLEPYRS
EECCCCCEEEEEEECEECCCCCC
>Mature Secondary Structure 
TEDRATTTSTDAAAPMRLHADPPRVTRLSRKMLASVGAVALLGIGGALVYALQTRDMGT
CCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCCCC
SGEELYSTDNRPTADGLSGLPRDYTGPVLGPPLPGDLGGPILDAQNRGQPVAPPVVAAPA
CCHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEECCC
VDPEEQRRLAEEEAARLSRVFFQTGPGTATATGGPGLAGLGLGSQTGATAGQDRHTAFLN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEECCCCCCCCCCCCCCCCEEEEC
GPVDRQTVALDRIMAPASPYILQAGAVIPAAMITGIRSDLPGQITAQVTENVYDSPTGSL
CCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCE
LLIPQGTRIIGQYDAGVTSGQRRVLLVWNRLILPNGRSIVLERQPGADASGFAGLEDGVD
EEEECCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCC
YHWWDLMKAAGLSTLLAVGTELATSDEDRLIRAIRDGAQDTINQAGQQIIQRQLQVAPTL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEE
TVRPGFPVRVIVTRDLVLEPYRS
EECCCCCEEEEEEECEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]