Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154244604
Identifier: 154244604
GI number: 154244604
Start: 733543
End: 734295
Strand: Reverse
Name: 154244604
Synonym: Xaut_0652
Alternate gene names: NA
Gene position: 734295-733543 (Counterclockwise)
Preceding gene: 154244606
Following gene: 154244602
Centisome position: 13.83
GC content: 69.59
Gene sequence:
>753_bases GTGATCGTCGATCCGGTGTTCTATGCGGCGGCGGTGCCGGCGACCATCCTCGTGGGCATGTCGAAGGGGGGCTTCACCGG CCTGTCGGTGCTCGCCCAGCCCATCCTGGCGCTGGCCATGTCGCCGATCCAGGCCGCCGCCATCCTTCTGCCGGTGCTCA TCGTGCAGGACGTGGTGAGCCTTTATGCCTATTGGCGGCGCTGGAGCGTGGCCGAGCTGCGCCGCACCCTGCCGGCCGCC GTGGTGGGCATCGTCATCGGCTACCTTTTGGCGGCGTCCGTTTCCGACCAGGCGGTGGCGCTGGGCATCGGGCTGCTCTC CATCGCCGAGGCCGCCCGCCATGCCGTGTCGAAGCGGCGCAAGCGCCCGGCGGGCGAAGCCGGGCCGGGCTCGGCGGCCC TATGGAGCGCGGTGGCAGGCTTCGTCAGCATGATCGCCAATGCCGGCGGCCCACCCATGATGATCTACCTGCTGCGCCGG CCCCGCCTCGCGCCCGAGCAGTTCGCGGCCACCACCGCCGCCTTCTTCTCGGTGGTCAATTGGGTGAAGGTGCCATTCTT CCTCGCCCTCGGCCAGATCACCGGGGCGAACCTGGCCACCTCGGCGGTTCTGCTGCCGGTGGCGATCATCGCCACCTTTG CCGGTGTGCAGCTGGTGCGGCGCGTGCCGGCCGACCGCTTCTTCGGCATCATCTACCTCATCCTTGCGGCGGTGGGCCTA AAGCTGGTCTTTGACGGCCTGCCGGCCTTCTGA
Upstream 100 bases:
>100_bases GAACCAGCGTCGGCCCGGAGCCCCATCGCTTGCGGCCGCCACGCTCTGGCGGAAACGGCCGGAGGGGTCTATCCCTCCCC GCCTCAGCGGGAGAGCGGGT
Downstream 100 bases:
>100_bases GGCCCCGAGCGCGGGCCGGCCAGCGACTGCCCACCCTTTGGGCGCCTGTTCCATGGACAGGGGCATGCCCAAAATTAGAG CAGATCGAAAGACGTCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Domain Protein; Permease; Transmembrane Protein; DUF81 Family Membrane Protein
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MIVDPVFYAAAVPATILVGMSKGGFTGLSVLAQPILALAMSPIQAAAILLPVLIVQDVVSLYAYWRRWSVAELRRTLPAA VVGIVIGYLLAASVSDQAVALGIGLLSIAEAARHAVSKRRKRPAGEAGPGSAALWSAVAGFVSMIANAGGPPMMIYLLRR PRLAPEQFAATTAAFFSVVNWVKVPFFLALGQITGANLATSAVLLPVAIIATFAGVQLVRRVPADRFFGIIYLILAAVGL KLVFDGLPAF
Sequences:
>Translated_250_residues MIVDPVFYAAAVPATILVGMSKGGFTGLSVLAQPILALAMSPIQAAAILLPVLIVQDVVSLYAYWRRWSVAELRRTLPAA VVGIVIGYLLAASVSDQAVALGIGLLSIAEAARHAVSKRRKRPAGEAGPGSAALWSAVAGFVSMIANAGGPPMMIYLLRR PRLAPEQFAATTAAFFSVVNWVKVPFFLALGQITGANLATSAVLLPVAIIATFAGVQLVRRVPADRFFGIIYLILAAVGL KLVFDGLPAF >Mature_250_residues MIVDPVFYAAAVPATILVGMSKGGFTGLSVLAQPILALAMSPIQAAAILLPVLIVQDVVSLYAYWRRWSVAELRRTLPAA VVGIVIGYLLAASVSDQAVALGIGLLSIAEAARHAVSKRRKRPAGEAGPGSAALWSAVAGFVSMIANAGGPPMMIYLLRR PRLAPEQFAATTAAFFSVVNWVKVPFFLALGQITGANLATSAVLLPVAIIATFAGVQLVRRVPADRFFGIIYLILAAVGL KLVFDGLPAF
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26151; Mature: 26151
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVDPVFYAAAVPATILVGMSKGGFTGLSVLAQPILALAMSPIQAAAILLPVLIVQDVVS CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYAYWRRWSVAELRRTLPAAVVGIVIGYLLAASVSDQAVALGIGLLSIAEAARHAVSKRR HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH KRPAGEAGPGSAALWSAVAGFVSMIANAGGPPMMIYLLRRPRLAPEQFAATTAAFFSVVN CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH WVKVPFFLALGQITGANLATSAVLLPVAIIATFAGVQLVRRVPADRFFGIIYLILAAVGL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KLVFDGLPAF HHHHHCCCCC >Mature Secondary Structure MIVDPVFYAAAVPATILVGMSKGGFTGLSVLAQPILALAMSPIQAAAILLPVLIVQDVVS CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYAYWRRWSVAELRRTLPAAVVGIVIGYLLAASVSDQAVALGIGLLSIAEAARHAVSKRR HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH KRPAGEAGPGSAALWSAVAGFVSMIANAGGPPMMIYLLRRPRLAPEQFAATTAAFFSVVN CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH WVKVPFFLALGQITGANLATSAVLLPVAIIATFAGVQLVRRVPADRFFGIIYLILAAVGL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KLVFDGLPAF HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA