Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154244602
Identifier: 154244602
GI number: 154244602
Start: 731533
End: 732810
Strand: Reverse
Name: 154244602
Synonym: Xaut_0650
Alternate gene names: NA
Gene position: 732810-731533 (Counterclockwise)
Preceding gene: 154244604
Following gene: 154244601
Centisome position: 13.8
GC content: 68.0
Gene sequence:
>1278_bases ATGGCTGACCCCGCAGGCTACGATATCCTCCTCAAGGGCGGACACGTCATCTGCCCCGCCTCCGGCATCGACGGCACCTT TGACGTGGCGATCCGCGATGGTCGCATCGCGGCGGTGGAACCCACCATCCTGCCGTCGGGCGCGGCCGAGGTTATCGATG TCTCCGGCAAGCTGGTGCTGCCGGGCATGATCGACACCCATGGCCACGTCTACCAGTACGTCACCGGCCGCTTCGGCCTG AACCCGGACATGGTGGGGGTCGACTCCGGCGTCACCACCGTCATCGACCAGGGCGGCCCCTCCTGCATGACCCTGCCGGG GTTCCGGAAGTTCATCGCCGAACCCTCCGATACCAGGGTCTACGCCTTCCTCTCGGCCTATCTGGTGGGCGGGCTCGAGG GCCATTACTACCCGAACCTGTACAGCCCCGAATGTGTCGATATCGACGCCACCGTGCGCTCGGCCATCGCCAACCGCGAC CTGGTGCGCGGCATCAAGGGCCATGCGGAAATCGGCGGCTTCGCCCGCTGGGGCATCAGGGTAATGGAGATGGCGGCGGA GATCGCCCGCCGTGCCGAACTCCCGCTCTATGTGCATTTCGGCACCCTGTGGGGCCTGCCCGAGAGCGGCGCCAACGGCG AGGACGCCGACACCATCCTGGAGCGCGTCATCCCGCTGCTGAAGGAAGGCGACGTGCTGGCCCACCCCTTCACCCGCCAT CCCGGCGGCTTCGTGAACCAGCAGGGCGAGGTCCACCACGTCATCCGCGCCGCCCTCGACCGCGGCCTGAAGGTGGATGT GGGCCACGGCAGCCACTTCTCCTACCGCCTTGCGAAAAAAGCCATTTCCGCCGGCGTCGTGCCCCACACGCTGGGTGCCG ACATGCATGGCTACAACACCCATGTGCCGCCCCCCGCCGGCACCCCGGCGGAGCACTATGACGACGAGAACCACCCCTTC AAGGGCCAGGCCCGCTTCAGCCTGACCCAGGCCATGAGCTCCATGATGGCCCTCGGCCTGTCGCTCGCCGACGTGGTGCC CATGGTCACCAGCAACCCGGCGCAGATGATCGGCCTCACCGATCGCATCGGCGCGCTGAAGGTGGGCTATGCCGCCGATG TCTCGGTGCTGGACGACCATCGCGGCCGCTTCCTGCTGCGCGACAACGAGGACACCAGGGTGATCGCCGAGCGGCTGCTC ACCCCCGCCTTCTGCCTGCGCGCCGGCAAGCGCTTCGATGCCAGGGCCCCCATCCTGCCACAGGCGGTGGCGGCGTGA
Upstream 100 bases:
>100_bases AGATCAAACTCTGGCATACGGCATGCATAACCAAAATACGAAGCATACTTCGCTTTTTCAATGCAGCGCGCCAGTCGCGC AGACATGGACGGAGATCCAG
Downstream 100 bases:
>100_bases GCGCGGCCGCCGCTCCGGCCCCGCAGGCGATCTGGGATACCCTGTCCCGGGCCGAGCGGGATGCCGCCTACAATAACAAC GCCGCGGTGCCCGACAGCGC
Product: dihydroorotase
Products: NA
Alternate protein names: Amidohydrolase; Amidohydrolase Family Protein; Metallo-Dependent Hydrolase; Aminohydrolase; Protein PhnM; LOW QUALITY PROTEIN Amidohydrolase
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MADPAGYDILLKGGHVICPASGIDGTFDVAIRDGRIAAVEPTILPSGAAEVIDVSGKLVLPGMIDTHGHVYQYVTGRFGL NPDMVGVDSGVTTVIDQGGPSCMTLPGFRKFIAEPSDTRVYAFLSAYLVGGLEGHYYPNLYSPECVDIDATVRSAIANRD LVRGIKGHAEIGGFARWGIRVMEMAAEIARRAELPLYVHFGTLWGLPESGANGEDADTILERVIPLLKEGDVLAHPFTRH PGGFVNQQGEVHHVIRAALDRGLKVDVGHGSHFSYRLAKKAISAGVVPHTLGADMHGYNTHVPPPAGTPAEHYDDENHPF KGQARFSLTQAMSSMMALGLSLADVVPMVTSNPAQMIGLTDRIGALKVGYAADVSVLDDHRGRFLLRDNEDTRVIAERLL TPAFCLRAGKRFDARAPILPQAVAA
Sequences:
>Translated_425_residues MADPAGYDILLKGGHVICPASGIDGTFDVAIRDGRIAAVEPTILPSGAAEVIDVSGKLVLPGMIDTHGHVYQYVTGRFGL NPDMVGVDSGVTTVIDQGGPSCMTLPGFRKFIAEPSDTRVYAFLSAYLVGGLEGHYYPNLYSPECVDIDATVRSAIANRD LVRGIKGHAEIGGFARWGIRVMEMAAEIARRAELPLYVHFGTLWGLPESGANGEDADTILERVIPLLKEGDVLAHPFTRH PGGFVNQQGEVHHVIRAALDRGLKVDVGHGSHFSYRLAKKAISAGVVPHTLGADMHGYNTHVPPPAGTPAEHYDDENHPF KGQARFSLTQAMSSMMALGLSLADVVPMVTSNPAQMIGLTDRIGALKVGYAADVSVLDDHRGRFLLRDNEDTRVIAERLL TPAFCLRAGKRFDARAPILPQAVAA >Mature_424_residues ADPAGYDILLKGGHVICPASGIDGTFDVAIRDGRIAAVEPTILPSGAAEVIDVSGKLVLPGMIDTHGHVYQYVTGRFGLN PDMVGVDSGVTTVIDQGGPSCMTLPGFRKFIAEPSDTRVYAFLSAYLVGGLEGHYYPNLYSPECVDIDATVRSAIANRDL VRGIKGHAEIGGFARWGIRVMEMAAEIARRAELPLYVHFGTLWGLPESGANGEDADTILERVIPLLKEGDVLAHPFTRHP GGFVNQQGEVHHVIRAALDRGLKVDVGHGSHFSYRLAKKAISAGVVPHTLGADMHGYNTHVPPPAGTPAEHYDDENHPFK GQARFSLTQAMSSMMALGLSLADVVPMVTSNPAQMIGLTDRIGALKVGYAADVSVLDDHRGRFLLRDNEDTRVIAERLLT PAFCLRAGKRFDARAPILPQAVAA
Specific function: Unknown
COG id: COG3964
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45523; Mature: 45391
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPAGYDILLKGGHVICPASGIDGTFDVAIRDGRIAAVEPTILPSGAAEVIDVSGKLVL CCCCCCCEEEEECCEEEECCCCCCCEEEEEEECCEEEEECCCCCCCCCCCEEECCCCEEE PGMIDTHGHVYQYVTGRFGLNPDMVGVDSGVTTVIDQGGPSCMTLPGFRKFIAEPSDTRV CCEECCCCCEEEEECCCCCCCCCCEECCCCCEEEEECCCCCEEECHHHHHHHCCCCCCCH YAFLSAYLVGGLEGHYYPNLYSPECVDIDATVRSAIANRDLVRGIKGHAEIGGFARWGIR HHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHH VMEMAAEIARRAELPLYVHFGTLWGLPESGANGEDADTILERVIPLLKEGDVLAHPFTRH HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCC PGGFVNQQGEVHHVIRAALDRGLKVDVGHGSHFSYRLAKKAISAGVVPHTLGADMHGYNT CCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCC HVPPPAGTPAEHYDDENHPFKGQARFSLTQAMSSMMALGLSLADVVPMVTSNPAQMIGLT CCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECH DRIGALKVGYAADVSVLDDHRGRFLLRDNEDTRVIAERLLTPAFCLRAGKRFDARAPILP HCCCCEEECCCCCCEEEECCCCEEEEECCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCC QAVAA HHHCC >Mature Secondary Structure ADPAGYDILLKGGHVICPASGIDGTFDVAIRDGRIAAVEPTILPSGAAEVIDVSGKLVL CCCCCCEEEEECCEEEECCCCCCCEEEEEEECCEEEEECCCCCCCCCCCEEECCCCEEE PGMIDTHGHVYQYVTGRFGLNPDMVGVDSGVTTVIDQGGPSCMTLPGFRKFIAEPSDTRV CCEECCCCCEEEEECCCCCCCCCCEECCCCCEEEEECCCCCEEECHHHHHHHCCCCCCCH YAFLSAYLVGGLEGHYYPNLYSPECVDIDATVRSAIANRDLVRGIKGHAEIGGFARWGIR HHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHH VMEMAAEIARRAELPLYVHFGTLWGLPESGANGEDADTILERVIPLLKEGDVLAHPFTRH HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCC PGGFVNQQGEVHHVIRAALDRGLKVDVGHGSHFSYRLAKKAISAGVVPHTLGADMHGYNT CCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCC HVPPPAGTPAEHYDDENHPFKGQARFSLTQAMSSMMALGLSLADVVPMVTSNPAQMIGLT CCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECH DRIGALKVGYAADVSVLDDHRGRFLLRDNEDTRVIAERLLTPAFCLRAGKRFDARAPILP HCCCCEEECCCCCCEEEECCCCEEEEECCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCC QAVAA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA