Click here to switch to the map view.

The map label for this gene is intZ [C]

Identifier: 154244572

GI number: 154244572

Start: 693196

End: 694554

Strand: Reverse

Name: intZ [C]

Synonym: Xaut_0620

Alternate gene names: 154244572

Gene position: 694554-693196 (Counterclockwise)

Preceding gene: 154244574

Following gene: 154244571

Centisome position: 13.08

GC content: 62.18

Gene sequence:

>1359_bases
ATGGCTAAGCTCACCAAAAGGGCTGTCGATGCCGCGGAAGCCGGCGCCAAGGATTACGTCATCTGGGACGATGAGCTCCC
TGGTTTTGGCCTCCGGGTTTTCACGTCCGGAAAGCGAAGCTACGTCCTTCAGTATCGGTCGGCTGGCCGATCGCGCCGGT
TCACGATCGGGCTGCACGGAGTGTGGACACCGGAACGCGCACGCCAGGAAGCCAAAGCGCAATTGGGCCGGATCGCGCAA
GGCGACGACCCGGCTGAAGAACGGTTGCTGGATCGTAAAGCGCTCACGGTCAAGGAACTCTGTGACCTCTACCTCGCCGA
TCTGCAGGCGGGTCTCATCCTCGGAAAAGGCGGCCGCCCCAAGAAGCCGGGCACGATCGCCTCCGATCTCGGCCGCATCC
ACCGTCATATCGTTCCCCTCCTCGGCTCGCGTCGCGTCAGGGACCTGACGAAGGCCGACATCACGAGGGCCATGAAGGAC
ATCATGGCAGGGAAGACCCGTATCTCCGTCATGACGAAGAACCTGCGCGGCAGGTCCATCGTGAGAGGCGGCGCCGGCAC
AGCTACGCGGACAATCGGTCTGCTCGGCGGCATCCTCACCTATGCTGTCGAAGCGGGGATCATCGAGACGAACCCGGCGC
ACGGTGTGCGGCGGCCGAAAGACAATGTCCGCGCCAGACGACTGAGCGAAGCCGAATATCGCGTCCTCGGCGACCTGCTC
AAGACGGCTTCCAAAAACGAGAACTACAGGATGTCGGTGGAGATCATCCGCCAGATCGCCCTGACCGGCTGCCGGCGCAT
GGAGATGGTGACGCTGCGATGGGATGAAGCCGATACGGATTGCAGTTGCCTGCGCCTGAAGGATAGCAAGGAGGGAAGCT
CCATCCGGCCCATCGGGCTGCCCGTGGTGGAGTATCTGGAGAGGCGCCGGAATGAGGCGATCGGAGATTACGTCTTCCCC
GGCCGGGGCGGCGAGAACGCGTTCGGCAGCTTCCCCAATCACTGGGGGAAGATCTTCGCAAACTCACCCCTGGCCGATAT
TAGCCCTCACGTCCTCCGCCACAGCTTCGCCAGCGTTGCGAACGATCTGGGTTTCACCGAGGTCACCATCGCCGCCCTGG
TTGGCCATGCGAAGGGATCGGTCACCAGCAACTACATCCATACGCTCGACACAGCTCTGATCATGGCCGCAGATACCATT
TCGGGCTACATCCAGGGGCTGCTCGACGGGATTGAGTTCAAGCAGACCGCCTATGCGCTCGATCGTGGGTCCCGGAAAGC
GGCGCTGGTCCAGTTTCTACAGGGAGCCTCGATCTCTCGGAGCACCAGTCAAAACGCCGGGGAACATGTCGGGCCATAA

Upstream 100 bases:

>100_bases
GTCAGACATAGCCGAGACTATCCTTCTCTCCGCCACCACTTTCTTCCTGCTGCTTACGTGGCGCTTACGCGAGGCGAAGC
GATCAGGGCGGAGAAACCCC

Downstream 100 bases:

>100_bases
GCTCAATGGTCCTCATCATAGTCAATCGTTACCGGAGCGCGGGCGATAGCCGTCCGTTGCCCCCCGGAGCGCAACATGCA
GCGACCATCAGCGCCGCCCT

Product: integrase family protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family Protein; Integrase; Phage Related Integrase; Integrase Protein; Site-Specific Recombinase Phage Integrase Family; Phage-Related Integrase; Phage-Like Integrase; Prophage Integrase; Site-Specific Recombinase/Integrase; LOW QUALITY PROTEIN Phage Integrase; Tyrosine Recombinase XerC; Sigma-70 Region 4 Family; Tyrosine Site-Specific Integrase/Recombinase Protein; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MAKLTKRAVDAAEAGAKDYVIWDDELPGFGLRVFTSGKRSYVLQYRSAGRSRRFTIGLHGVWTPERARQEAKAQLGRIAQ
GDDPAEERLLDRKALTVKELCDLYLADLQAGLILGKGGRPKKPGTIASDLGRIHRHIVPLLGSRRVRDLTKADITRAMKD
IMAGKTRISVMTKNLRGRSIVRGGAGTATRTIGLLGGILTYAVEAGIIETNPAHGVRRPKDNVRARRLSEAEYRVLGDLL
KTASKNENYRMSVEIIRQIALTGCRRMEMVTLRWDEADTDCSCLRLKDSKEGSSIRPIGLPVVEYLERRRNEAIGDYVFP
GRGGENAFGSFPNHWGKIFANSPLADISPHVLRHSFASVANDLGFTEVTIAALVGHAKGSVTSNYIHTLDTALIMAADTI
SGYIQGLLDGIEFKQTAYALDRGSRKAALVQFLQGASISRSTSQNAGEHVGP

Sequences:

>Translated_452_residues
MAKLTKRAVDAAEAGAKDYVIWDDELPGFGLRVFTSGKRSYVLQYRSAGRSRRFTIGLHGVWTPERARQEAKAQLGRIAQ
GDDPAEERLLDRKALTVKELCDLYLADLQAGLILGKGGRPKKPGTIASDLGRIHRHIVPLLGSRRVRDLTKADITRAMKD
IMAGKTRISVMTKNLRGRSIVRGGAGTATRTIGLLGGILTYAVEAGIIETNPAHGVRRPKDNVRARRLSEAEYRVLGDLL
KTASKNENYRMSVEIIRQIALTGCRRMEMVTLRWDEADTDCSCLRLKDSKEGSSIRPIGLPVVEYLERRRNEAIGDYVFP
GRGGENAFGSFPNHWGKIFANSPLADISPHVLRHSFASVANDLGFTEVTIAALVGHAKGSVTSNYIHTLDTALIMAADTI
SGYIQGLLDGIEFKQTAYALDRGSRKAALVQFLQGASISRSTSQNAGEHVGP
>Mature_451_residues
AKLTKRAVDAAEAGAKDYVIWDDELPGFGLRVFTSGKRSYVLQYRSAGRSRRFTIGLHGVWTPERARQEAKAQLGRIAQG
DDPAEERLLDRKALTVKELCDLYLADLQAGLILGKGGRPKKPGTIASDLGRIHRHIVPLLGSRRVRDLTKADITRAMKDI
MAGKTRISVMTKNLRGRSIVRGGAGTATRTIGLLGGILTYAVEAGIIETNPAHGVRRPKDNVRARRLSEAEYRVLGDLLK
TASKNENYRMSVEIIRQIALTGCRRMEMVTLRWDEADTDCSCLRLKDSKEGSSIRPIGLPVVEYLERRRNEAIGDYVFPG
RGGENAFGSFPNHWGKIFANSPLADISPHVLRHSFASVANDLGFTEVTIAALVGHAKGSVTSNYIHTLDTALIMAADTIS
GYIQGLLDGIEFKQTAYALDRGSRKAALVQFLQGASISRSTSQNAGEHVGP

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49432; Mature: 49301

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLTKRAVDAAEAGAKDYVIWDDELPGFGLRVFTSGKRSYVLQYRSAGRSRRFTIGLHG
CCCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCHHEEEEEHHCCCCEEEEEEECC
VWTPERARQEAKAQLGRIAQGDDPAEERLLDRKALTVKELCDLYLADLQAGLILGKGGRP
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCC
KKPGTIASDLGRIHRHIVPLLGSRRVRDLTKADITRAMKDIMAGKTRISVMTKNLRGRSI
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCEE
VRGGAGTATRTIGLLGGILTYAVEAGIIETNPAHGVRRPKDNVRARRLSEAEYRVLGDLL
EECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KTASKNENYRMSVEIIRQIALTGCRRMEMVTLRWDEADTDCSCLRLKDSKEGSSIRPIGL
HHHCCCCCEEHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCC
PVVEYLERRRNEAIGDYVFPGRGGENAFGSFPNHWGKIFANSPLADISPHVLRHSFASVA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHH
NDLGFTEVTIAALVGHAKGSVTSNYIHTLDTALIMAADTISGYIQGLLDGIEFKQTAYAL
HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRGSRKAALVQFLQGASISRSTSQNAGEHVGP
HCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKLTKRAVDAAEAGAKDYVIWDDELPGFGLRVFTSGKRSYVLQYRSAGRSRRFTIGLHG
CCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCHHEEEEEHHCCCCEEEEEEECC
VWTPERARQEAKAQLGRIAQGDDPAEERLLDRKALTVKELCDLYLADLQAGLILGKGGRP
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCC
KKPGTIASDLGRIHRHIVPLLGSRRVRDLTKADITRAMKDIMAGKTRISVMTKNLRGRSI
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCEE
VRGGAGTATRTIGLLGGILTYAVEAGIIETNPAHGVRRPKDNVRARRLSEAEYRVLGDLL
EECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KTASKNENYRMSVEIIRQIALTGCRRMEMVTLRWDEADTDCSCLRLKDSKEGSSIRPIGL
HHHCCCCCEEHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCC
PVVEYLERRRNEAIGDYVFPGRGGENAFGSFPNHWGKIFANSPLADISPHVLRHSFASVA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHH
NDLGFTEVTIAALVGHAKGSVTSNYIHTLDTALIMAADTISGYIQGLLDGIEFKQTAYAL
HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRGSRKAALVQFLQGASISRSTSQNAGEHVGP
HCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA