Click here to switch to the map view.

The map label for this gene is insH5 [C]

Identifier: 154244512

GI number: 154244512

Start: 629588

End: 630964

Strand: Reverse

Name: insH5 [C]

Synonym: Xaut_0557

Alternate gene names: 154244512

Gene position: 630964-629588 (Counterclockwise)

Preceding gene: 154244515

Following gene: 154244511

Centisome position: 11.88

GC content: 67.18

Gene sequence:

>1377_bases
ATGATGGGCGAGCGGACGGGGGCGCAGGAGGCGCTGTTCTACCAGTTCAGCCTCGAGCGCCACGTTCCTGCCGGCCACCT
CGTGCGCGCCATCGATAGGTTCGTCGACCTCGCCGGCATCCGGGCGCACCTCAAGCCCTTCTACAGCGAGACCGGCCGGC
CCTCGATCGACCCCGAGCTGATGATCCGGATGCTGCTCGTCGGCTATTGCTTCGGCATCCGCTCGGAGCGGCGGCTGTGC
GAGGAGGTCCACCTCAACCTGGCCTATCGATGGTTCTGTCGGCTTGGCCTCGACGGCCGCGTGCCGGACCACTCCACCTT
CTCCAAGAACCGGCACGGCCGCTTCCGCGACAGCGACCTGTTGAGGCACCTGTTCGAGACGGTGCTGCAGCGTTGCATCG
CTGAGGGGCTGGTCGGCGGGGAAGGCTTCGCCGTCGATGCCAGCCTGATCAAGGCCGAGGCCAGCCGGCAGAAGGGTGTC
GATGGCAAAGCCGGGCTGTCGCCCGAGGCGGCCGGCCGCGCGGTTGAGGAATATCTCGCCGTCCTCGACGATGCGGCCTT
CGGCGCGGCCACCGAGGTCACCCCGAAGTTCCTCTCGCCGGCGGATCCGGCCGCCCGCTGGACCGGAGCGCACGGCGGCC
AAGCCTTCTTCGCCTATTCCACCAATTATCTGATCGACGTGGACAACGCGATCATCGTCGACGTCGAGGCCACCACCGCG
ATCCGACAGGCCGAGGTCCTGGCGGCGAAACGCATGATCGAACGGTCGATGGAGCGTTTCGATCTTTATCCGGCACGGCT
GATGGGCGACAGCGCCTATGGCTCCGCCGAGATGCTCGCCTGGCTCGTGCACGAGCACGGCATCGAGCCGCACGTCCCGG
TGTTCGATAAGTCGGCGCGCCGCGACGGCACATTCAGCCGCACCGACTTCGCCTACGATCATGTTCGGGACCTCTACACC
TGTCCGGGCGGCAAGGAGCTGCGCCGGTATCGTCGCCACTTCAGTGTGACCCGCGACAGCGTCGATCCACACGGCTTCAT
GCGCTACCGCGCGGCCAAGTCCGACTGCGGTGCCTGTGCGTTGAAATCGCAGTGTTGCCCAGCCGAACCGCCACGCAAGG
TCTTGCGGTCGATCCATGAAGGGGCCCGAGACATGGCGCGGGACATCGCCGCCACCGAGGCCTACGTCACGTCACGGCGG
CAGCGCAAGAAGGTGGAGATGCTGTTCGCCCACCTCAAGCGCATCCTGAAGCTCGACCGGCTCCGCCTGCGGGGCCCGAA
TGGCGCCCGGGACGAGTTCCACCTCGCCGCCACTGCCCAGAACCTCAGGAAGCTCGCCAAGCTCATGCCGCGTGGAGCAC
GAGCGGCTGCGGCCTGA

Upstream 100 bases:

>100_bases
ATTCTCAATGTCTGCAGAGGGTCGATTCCGTTGAAAAAGTCGGTGTTGCTGCGGGCTCGAAGTCCTGATTCAGTTGTCCT
CATGGATGGAGGGCAGGCCG

Downstream 100 bases:

>100_bases
GGAGAGAGGCTCGTTCTGCGTGCAAAAAGACCGATCTCGCCGCGCACCCAGCGGAGGGTTTTTCAACGGAATCGGTCATC
TTTTGCCTTTGCGAACAGGG

Product: transposase IS4 family protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISBma2 Transposase; Transposase IS4 Family; IS4 Family Transposase; ISPsy22 Transposase Truncated; Transposase And Inactivated Derivative; IS5 Family Transposase N-Terminal Domain Protein; Transposase Is4 Family Protein; ISPsy6 Transposase; IS5 Family Transposase; ISGsu3 Transposase; Transposase For Insertion Sequence Element; ISMca1 Transposase; IS5 Family Transposase N-Terminal Domain; Transposase Fragment IS5 Family; ISCps6 Transposase; IS4 Transposase; Transposase For IS; Acyl-CoA N-Acyltransferase Domain; ISPpu20 Transposase; Transposase-Related Protein; Transposase Mutator Type; Phage-Associated Cell Wall Hydrolase; Transposase Truncated; ISGsu2 Transposase; Transposase Is4 Family; Transposase For Insertion Sequence NGRIS-8b; ISSag8 Transposase; Transposase Fragment

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MMGERTGAQEALFYQFSLERHVPAGHLVRAIDRFVDLAGIRAHLKPFYSETGRPSIDPELMIRMLLVGYCFGIRSERRLC
EEVHLNLAYRWFCRLGLDGRVPDHSTFSKNRHGRFRDSDLLRHLFETVLQRCIAEGLVGGEGFAVDASLIKAEASRQKGV
DGKAGLSPEAAGRAVEEYLAVLDDAAFGAATEVTPKFLSPADPAARWTGAHGGQAFFAYSTNYLIDVDNAIIVDVEATTA
IRQAEVLAAKRMIERSMERFDLYPARLMGDSAYGSAEMLAWLVHEHGIEPHVPVFDKSARRDGTFSRTDFAYDHVRDLYT
CPGGKELRRYRRHFSVTRDSVDPHGFMRYRAAKSDCGACALKSQCCPAEPPRKVLRSIHEGARDMARDIAATEAYVTSRR
QRKKVEMLFAHLKRILKLDRLRLRGPNGARDEFHLAATAQNLRKLAKLMPRGARAAAA

Sequences:

>Translated_458_residues
MMGERTGAQEALFYQFSLERHVPAGHLVRAIDRFVDLAGIRAHLKPFYSETGRPSIDPELMIRMLLVGYCFGIRSERRLC
EEVHLNLAYRWFCRLGLDGRVPDHSTFSKNRHGRFRDSDLLRHLFETVLQRCIAEGLVGGEGFAVDASLIKAEASRQKGV
DGKAGLSPEAAGRAVEEYLAVLDDAAFGAATEVTPKFLSPADPAARWTGAHGGQAFFAYSTNYLIDVDNAIIVDVEATTA
IRQAEVLAAKRMIERSMERFDLYPARLMGDSAYGSAEMLAWLVHEHGIEPHVPVFDKSARRDGTFSRTDFAYDHVRDLYT
CPGGKELRRYRRHFSVTRDSVDPHGFMRYRAAKSDCGACALKSQCCPAEPPRKVLRSIHEGARDMARDIAATEAYVTSRR
QRKKVEMLFAHLKRILKLDRLRLRGPNGARDEFHLAATAQNLRKLAKLMPRGARAAAA
>Mature_458_residues
MMGERTGAQEALFYQFSLERHVPAGHLVRAIDRFVDLAGIRAHLKPFYSETGRPSIDPELMIRMLLVGYCFGIRSERRLC
EEVHLNLAYRWFCRLGLDGRVPDHSTFSKNRHGRFRDSDLLRHLFETVLQRCIAEGLVGGEGFAVDASLIKAEASRQKGV
DGKAGLSPEAAGRAVEEYLAVLDDAAFGAATEVTPKFLSPADPAARWTGAHGGQAFFAYSTNYLIDVDNAIIVDVEATTA
IRQAEVLAAKRMIERSMERFDLYPARLMGDSAYGSAEMLAWLVHEHGIEPHVPVFDKSARRDGTFSRTDFAYDHVRDLYT
CPGGKELRRYRRHFSVTRDSVDPHGFMRYRAAKSDCGACALKSQCCPAEPPRKVLRSIHEGARDMARDIAATEAYVTSRR
QRKKVEMLFAHLKRILKLDRLRLRGPNGARDEFHLAATAQNLRKLAKLMPRGARAAAA

Specific function: Involved in the transposition of the insertion sequence is5 [C]

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51307; Mature: 51307

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGERTGAQEALFYQFSLERHVPAGHLVRAIDRFVDLAGIRAHLKPFYSETGRPSIDPEL
CCCCCCCCHHHHHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
MIRMLLVGYCFGIRSERRLCEEVHLNLAYRWFCRLGLDGRVPDHSTFSKNRHGRFRDSDL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
LRHLFETVLQRCIAEGLVGGEGFAVDASLIKAEASRQKGVDGKAGLSPEAAGRAVEEYLA
HHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
VLDDAAFGAATEVTPKFLSPADPAARWTGAHGGQAFFAYSTNYLIDVDNAIIVDVEATTA
HHHHHHCCCCCCCCHHHCCCCCCHHHCCCCCCCCEEEEEECCEEEEECCEEEEEECHHHH
IRQAEVLAAKRMIERSMERFDLYPARLMGDSAYGSAEMLAWLVHEHGIEPHVPVFDKSAR
HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
RDGTFSRTDFAYDHVRDLYTCPGGKELRRYRRHFSVTRDSVDPHGFMRYRAAKSDCGACA
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHH
LKSQCCPAEPPRKVLRSIHEGARDMARDIAATEAYVTSRRQRKKVEMLFAHLKRILKLDR
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRLRGPNGARDEFHLAATAQNLRKLAKLMPRGARAAAA
HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCC
>Mature Secondary Structure
MMGERTGAQEALFYQFSLERHVPAGHLVRAIDRFVDLAGIRAHLKPFYSETGRPSIDPEL
CCCCCCCCHHHHHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
MIRMLLVGYCFGIRSERRLCEEVHLNLAYRWFCRLGLDGRVPDHSTFSKNRHGRFRDSDL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
LRHLFETVLQRCIAEGLVGGEGFAVDASLIKAEASRQKGVDGKAGLSPEAAGRAVEEYLA
HHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
VLDDAAFGAATEVTPKFLSPADPAARWTGAHGGQAFFAYSTNYLIDVDNAIIVDVEATTA
HHHHHHCCCCCCCCHHHCCCCCCHHHCCCCCCCCEEEEEECCEEEEECCEEEEEECHHHH
IRQAEVLAAKRMIERSMERFDLYPARLMGDSAYGSAEMLAWLVHEHGIEPHVPVFDKSAR
HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
RDGTFSRTDFAYDHVRDLYTCPGGKELRRYRRHFSVTRDSVDPHGFMRYRAAKSDCGACA
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHH
LKSQCCPAEPPRKVLRSIHEGARDMARDIAATEAYVTSRRQRKKVEMLFAHLKRILKLDR
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRLRGPNGARDEFHLAATAQNLRKLAKLMPRGARAAAA
HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA