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The map label for this gene is traG [H]

Identifier: 154244490

GI number: 154244490

Start: 603503

End: 605032

Strand: Reverse

Name: traG [H]

Synonym: Xaut_0535

Alternate gene names: 154244490

Gene position: 605032-603503 (Counterclockwise)

Preceding gene: 154244491

Following gene: 154244487

Centisome position: 11.4

GC content: 64.05

Gene sequence:

>1530_bases
ATGGCGGCCTTCAATGACGATTTCACGCGAGACGTGGCGCGCGGTGTCACGTCCCGATTCCTTCACCAGCAAGCGGTGCC
GCAGGCGCGGTGGGAGCCGGTCGATAAAATCTGCGCCAGCCGGGCGATGGCCTACGACCCCAACAACCCCGGCGGCAAAA
TCCTGGTCGGCGCCATCGGCGACCGGCTGATCGGCATTGACGATAACCGTCACGTCATGACGGTGGCGGGATCGCGCACC
GGCAAGTCGGTGACGGTGGTCAATAACCTGCTGTTCTATCCCGGCAGCGTGCTGGCGCTTGATCCGAAGGGCGAGCTGGC
GGCGATCACGGCGGAGCGCCGGGCGGCGCTGGGCCAGAAAGTGTGCATCCTCGATCCCTTCAACATCGTGCCGGAACGGC
TGGCCCGGTATCGGGTCAGTTTCAATCCGCTGATGCTGCTCGATCCCGCCGGGGAGACGGTGATCGAGAATGCGGGGCTG
ATATCGGACGCGCTGGTGATTGCGGGCGGGCGGGACCCGCACTGGGATGAAAGCGCCCGCGTGCTGATCGAGGGGTTGCT
GCTGCACATGGCGACGGCCCCGGCGCTGGAAGGACGGCGCAACCTGATCGCGCTGCGTGATCTGCTGGGTGAGGCGCTGA
AGACCACGGGCGATGAGGAGGATGATCCGTTCGTCCTTGAATATGCGATGCTGAGCAATGCCGCGCGGTTGCAGCGTGCG
CCGGAGACGGCCCATCTGGGGCATATCCTTGAGCGGTCGGCCCGGGATTTCTATGAACGCCCGGCGAATGAGCGGGCGAG
CGTGCTGTCGACGGCGCGCCGCCATACCAAGCTGTTCGATTTCAGCGCGATGGCCCGGGTGCTGGAGGGCCATGATTTCG
ACCTGTCGGAGCTGAAGACGACGAAGGGCGGCATGACGGTCTATCTGTGCCTGCCGGCGAGCCGCATGGGGCTGTGCAGC
CGGTGGCTGCGGCTGTTCATCAACCTGCTGCTGGAGGCGATGGAACGGGAGCGGACGCCCGTGGCCTGCCCGGTCCTCGC
CTGCCTCGATGAATTCCCGGTGCTGGGGCATATGCGCCAGATCGAGGACGCGGCGGGACAGATCGCGTCCTTTGGCGTCA
GGCTCTGGATCATTTTACAGGACTGGGGTCAGGGCAAGGCGCTTTACAAGGAGCGCTGGGAGACGTTTGCCGGCAATGCC
GGGATCATGCAGTTTTTCGGCAACAACGATTTGCAGACGACGGAGTATGTCTCAAAGCGCCTTGGCAAGACTATTGTGAA
GGTCACGCGCGAGAGCGAGGCCGGCACCGATCAGCGGGTTTCGGGCATTACGGGCCGCTCGGAATCGATTGAACAATTTG
ACCTGCTGACGCCGGACGAGGTCAGCCGGCAGTTCGCGCGCGGCGACCGGCTGAAGCGGCAGCTGGTGCTGTGGGCGGGT
TACAATCCGCTGATGCTGCAAAGGGTCGAGTATTTCAACCAATGGAGTCCGGTCCATGGGTGGTTCCGGGGAACTTATGC
CTCGCCCTGA

Upstream 100 bases:

>100_bases
CGCCCCAACCATCACAACGGCTACCCGCGAGGAATCCGCGAGATCGAGCCTATCATGCCTTGTCTATGATTCCCGCATAC
GACCTGTGGGGATCAGCGCC

Downstream 100 bases:

>100_bases
CCCGTGAGCTTTCCGGACTGGCCGGCGCGCTGCACCGCGGCCACGCCGGTTTTGTATTGGAGGTCGGCAAGATAGCGCCC
CAGCGCGGGGTTGCGCGCAA

Product: TRAG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MAAFNDDFTRDVARGVTSRFLHQQAVPQARWEPVDKICASRAMAYDPNNPGGKILVGAIGDRLIGIDDNRHVMTVAGSRT
GKSVTVVNNLLFYPGSVLALDPKGELAAITAERRAALGQKVCILDPFNIVPERLARYRVSFNPLMLLDPAGETVIENAGL
ISDALVIAGGRDPHWDESARVLIEGLLLHMATAPALEGRRNLIALRDLLGEALKTTGDEEDDPFVLEYAMLSNAARLQRA
PETAHLGHILERSARDFYERPANERASVLSTARRHTKLFDFSAMARVLEGHDFDLSELKTTKGGMTVYLCLPASRMGLCS
RWLRLFINLLLEAMERERTPVACPVLACLDEFPVLGHMRQIEDAAGQIASFGVRLWIILQDWGQGKALYKERWETFAGNA
GIMQFFGNNDLQTTEYVSKRLGKTIVKVTRESEAGTDQRVSGITGRSESIEQFDLLTPDEVSRQFARGDRLKRQLVLWAG
YNPLMLQRVEYFNQWSPVHGWFRGTYASP

Sequences:

>Translated_509_residues
MAAFNDDFTRDVARGVTSRFLHQQAVPQARWEPVDKICASRAMAYDPNNPGGKILVGAIGDRLIGIDDNRHVMTVAGSRT
GKSVTVVNNLLFYPGSVLALDPKGELAAITAERRAALGQKVCILDPFNIVPERLARYRVSFNPLMLLDPAGETVIENAGL
ISDALVIAGGRDPHWDESARVLIEGLLLHMATAPALEGRRNLIALRDLLGEALKTTGDEEDDPFVLEYAMLSNAARLQRA
PETAHLGHILERSARDFYERPANERASVLSTARRHTKLFDFSAMARVLEGHDFDLSELKTTKGGMTVYLCLPASRMGLCS
RWLRLFINLLLEAMERERTPVACPVLACLDEFPVLGHMRQIEDAAGQIASFGVRLWIILQDWGQGKALYKERWETFAGNA
GIMQFFGNNDLQTTEYVSKRLGKTIVKVTRESEAGTDQRVSGITGRSESIEQFDLLTPDEVSRQFARGDRLKRQLVLWAG
YNPLMLQRVEYFNQWSPVHGWFRGTYASP
>Mature_508_residues
AAFNDDFTRDVARGVTSRFLHQQAVPQARWEPVDKICASRAMAYDPNNPGGKILVGAIGDRLIGIDDNRHVMTVAGSRTG
KSVTVVNNLLFYPGSVLALDPKGELAAITAERRAALGQKVCILDPFNIVPERLARYRVSFNPLMLLDPAGETVIENAGLI
SDALVIAGGRDPHWDESARVLIEGLLLHMATAPALEGRRNLIALRDLLGEALKTTGDEEDDPFVLEYAMLSNAARLQRAP
ETAHLGHILERSARDFYERPANERASVLSTARRHTKLFDFSAMARVLEGHDFDLSELKTTKGGMTVYLCLPASRMGLCSR
WLRLFINLLLEAMERERTPVACPVLACLDEFPVLGHMRQIEDAAGQIASFGVRLWIILQDWGQGKALYKERWETFAGNAG
IMQFFGNNDLQTTEYVSKRLGKTIVKVTRESEAGTDQRVSGITGRSESIEQFDLLTPDEVSRQFARGDRLKRQLVLWAGY
NPLMLQRVEYFNQWSPVHGWFRGTYASP

Specific function: Required for conjugative transfer of plasmid R751. Binds tightly and specifically to the relaxase traI. Can also bind to DNA without sequence specificity. May form a pore-like structure that could serve as a channel for DNA transfer [H]

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the virD4/traG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003688 [H]

Pfam domain/function: PF02534 TraG [H]

EC number: NA

Molecular weight: Translated: 56741; Mature: 56609

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAFNDDFTRDVARGVTSRFLHQQAVPQARWEPVDKICASRAMAYDPNNPGGKILVGAIG
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEECCCCCCCCEEEEEECC
DRLIGIDDNRHVMTVAGSRTGKSVTVVNNLLFYPGSVLALDPKGELAAITAERRAALGQK
CEEEECCCCCEEEEEECCCCCCEEEEEHHHHHCCCCEEEECCCCCEEEEEHHHHHHCCCC
VCILDPFNIVPERLARYRVSFNPLMLLDPAGETVIENAGLISDALVIAGGRDPHWDESAR
EEEECCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHCCCCCCCEEEEECCCCCCCCHHHH
VLIEGLLLHMATAPALEGRRNLIALRDLLGEALKTTGDEEDDPFVLEYAMLSNAARLQRA
HHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCC
PETAHLGHILERSARDFYERPANERASVLSTARRHTKLFDFSAMARVLEGHDFDLSELKT
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
TKGGMTVYLCLPASRMGLCSRWLRLFINLLLEAMERERTPVACPVLACLDEFPVLGHMRQ
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHH
IEDAAGQIASFGVRLWIILQDWGQGKALYKERWETFAGNAGIMQFFGNNDLQTTEYVSKR
HHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHH
LGKTIVKVTRESEAGTDQRVSGITGRSESIEQFDLLTPDEVSRQFARGDRLKRQLVLWAG
HHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEC
YNPLMLQRVEYFNQWSPVHGWFRGTYASP
CCHHHHHHHHHHHCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
AAFNDDFTRDVARGVTSRFLHQQAVPQARWEPVDKICASRAMAYDPNNPGGKILVGAIG
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEECCCCCCCCEEEEEECC
DRLIGIDDNRHVMTVAGSRTGKSVTVVNNLLFYPGSVLALDPKGELAAITAERRAALGQK
CEEEECCCCCEEEEEECCCCCCEEEEEHHHHHCCCCEEEECCCCCEEEEEHHHHHHCCCC
VCILDPFNIVPERLARYRVSFNPLMLLDPAGETVIENAGLISDALVIAGGRDPHWDESAR
EEEECCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHCCCCCCCEEEEECCCCCCCCHHHH
VLIEGLLLHMATAPALEGRRNLIALRDLLGEALKTTGDEEDDPFVLEYAMLSNAARLQRA
HHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCC
PETAHLGHILERSARDFYERPANERASVLSTARRHTKLFDFSAMARVLEGHDFDLSELKT
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
TKGGMTVYLCLPASRMGLCSRWLRLFINLLLEAMERERTPVACPVLACLDEFPVLGHMRQ
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHH
IEDAAGQIASFGVRLWIILQDWGQGKALYKERWETFAGNAGIMQFFGNNDLQTTEYVSKR
HHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHH
LGKTIVKVTRESEAGTDQRVSGITGRSESIEQFDLLTPDEVSRQFARGDRLKRQLVLWAG
HHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEC
YNPLMLQRVEYFNQWSPVHGWFRGTYASP
CCHHHHHHHHHHHCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1665997 [H]