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The map label for this gene is ubiX [C]

Identifier: 153952584

GI number: 153952584

Start: 1090057

End: 1090620

Strand: Direct

Name: ubiX [C]

Synonym: JJD26997_1244

Alternate gene names: 153952584

Gene position: 1090057-1090620 (Clockwise)

Preceding gene: 153952192

Following gene: 153951621

Centisome position: 59.08

GC content: 31.03

Gene sequence:

>564_bases
ATGAAGGTTTTATTAGGAATTTCTGGTTCAAGCAGTGTCAATTTAGGCTTAAAATTATTAAAAAATTTAGAAAATCAATG
CGAACTTTATTGTATTTTAACTCAAGGCTCAAAACTTAGTTTCAAAGCCGAAAATCAGGCAGATTTAGAAGAAATTTGTC
GAGAAAATTTTAAACACACTTATTTTTTAGATGATAAAAATTTAAGTCTAAGCGTAGCAAGTGGATCTTTTGGAATAGAA
AAAACCATCATTGCCCCTTGTTCGATTTCAAGTTTGGCAAAAATTCGTGCTGGTTTTGCAGACACTCTTTTAATGCGTGC
TGTAGCAGTAGCCTTAAAAGAAAGAAAAAAACTCATCTTAGGCATACGCGAAATGCCTTTTTCTACTTTAAATTTAGAAC
ATATGTTAAAACTTAGCCAAATGGGAGTTATTATCGCACCTCCTATTATCGCAAGCTATTCTAAAGCAAACAATCTAGAA
CAAATGGAAAATTTTATCGTAGGCAAATGGCTAGATCTTTTAGAAATAAAACACGATTTATATGAAAAATGGCAAAATTT
TTAG

Upstream 100 bases:

>100_bases
CTTTGCAAAGTGCAAATATGGGCGAAAGAATTCATGCAAAAAACAAAGAAGGTAAAGTTATGCAAGGTATCGTAGTGGGT
AAAAATAGGATGATTATACA

Downstream 100 bases:

>100_bases
TTTAAATTTGTTATATTTTTAAAAAAAATTGGAGCAAAAATGACTTGTTTATATCCTGGGACTTTTGATCCTATTACCAA
CGGACATTTAGATGTCATAA

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGSKLSFKAENQADLEEICRENFKHTYFLDDKNLSLSVASGSFGIE
KTIIAPCSISSLAKIRAGFADTLLMRAVAVALKERKKLILGIREMPFSTLNLEHMLKLSQMGVIIAPPIIASYSKANNLE
QMENFIVGKWLDLLEIKHDLYEKWQNF

Sequences:

>Translated_187_residues
MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGSKLSFKAENQADLEEICRENFKHTYFLDDKNLSLSVASGSFGIE
KTIIAPCSISSLAKIRAGFADTLLMRAVAVALKERKKLILGIREMPFSTLNLEHMLKLSQMGVIIAPPIIASYSKANNLE
QMENFIVGKWLDLLEIKHDLYEKWQNF
>Mature_187_residues
MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGSKLSFKAENQADLEEICRENFKHTYFLDDKNLSLSVASGSFGIE
KTIIAPCSISSLAKIRAGFADTLLMRAVAVALKERKKLILGIREMPFSTLNLEHMLKLSQMGVIIAPPIIASYSKANNLE
QMENFIVGKWLDLLEIKHDLYEKWQNF

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=190, Percent_Identity=32.1052631578947, Blast_Score=112, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6320746, Length=186, Percent_Identity=35.4838709677419, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.- [C]

Molecular weight: Translated: 20969; Mature: 20969

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGSKLSFKAENQADLEEICRENFKHT
CEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCCCCHHHHHHHCCCEE
YFLDDKNLSLSVASGSFGIEKTIIAPCSISSLAKIRAGFADTLLMRAVAVALKERKKLIL
EEECCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
GIREMPFSTLNLEHMLKLSQMGVIIAPPIIASYSKANNLEQMENFIVGKWLDLLEIKHDL
HHHHCCCCCCCHHHHHHHHHCCEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YEKWQNF
HHHHHCC
>Mature Secondary Structure
MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGSKLSFKAENQADLEEICRENFKHT
CEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCCCCHHHHHHHCCCEE
YFLDDKNLSLSVASGSFGIEKTIIAPCSISSLAKIRAGFADTLLMRAVAVALKERKKLIL
EEECCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
GIREMPFSTLNLEHMLKLSQMGVIIAPPIIASYSKANNLEQMENFIVGKWLDLLEIKHDL
HHHHCCCCCCCHHHHHHHHHCCEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YEKWQNF
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]