| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
Click here to switch to the map view.
The map label for this gene is yicG [C]
Identifier: 153952268
GI number: 153952268
Start: 950822
End: 951454
Strand: Direct
Name: yicG [C]
Synonym: JJD26997_1076
Alternate gene names: 153952268
Gene position: 950822-951454 (Clockwise)
Preceding gene: 153951154
Following gene: 153951710
Centisome position: 51.53
GC content: 36.33
Gene sequence:
>633_bases ATGGAGATAAATGCTCTTACGATAACCACTCTTTATATCATAGGTATTTCCGCAGAAGGAATGACGGGAGCTTTAGCTGC GGGACGCCATAGAATGGATCTTTTTGGAGTTATTTTTATTGCGCTCGTAACTGCAATTGGAGGCGGAAGCATACGAGATG TGCTTTTAGGACATTATCCTTTAACTTGGGTTAAACATCCTGAATATATTATTTTAATCTGTTTTTGCGCCCTTGTAGCG ACAAAAATTCCACGCGTAGTAACCAAGCTTGAAACTTTATTTCTAACTCTTGATGCTATAGGACTTGTTGTTTTTAGCAT ACTTGGAGCTCAAATAGCTATAGATCAAAACCATGGGTTTATCATAGCCGTTGCCGCAGCTGTAATTACCGGTGTTTTTG GTGGAATTTTAAGAGATATTTTATGCATGAGAATCCCCTTGGTGTTTCAAAAAGAAATTTATGCAGGAATTGCCATAATT TCAGGAGCAATCTACTATTCTCTAATAATTTGGCTTGAGCTTAATGCCCTAGTTTGCACACTTTTAACTCTTTTTATAGG GGTTATTGCAAGGCTTTTAGCTATCAAATATCAATGGTCTTTACCTATTTTTTCTTACAATGAAGAAAAATAA
Upstream 100 bases:
>100_bases CCAAAATTTAAAGAATGCTATCAAGTACCAAACCATGAAGTAAATGATGAAAATATTAAACAGTATCAAATAAATTGTAA TAAATTTTAAGGTATAAATT
Downstream 100 bases:
>100_bases TTTATCATTGCTTTATACAAGTTTGCTAAGATATTAAAAATTTTAGGAGATTTATAAATGCGAAGACTAAGTATTTTACT TATGATTTTAATAGTTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MEINALTITTLYIIGISAEGMTGALAAGRHRMDLFGVIFIALVTAIGGGSIRDVLLGHYPLTWVKHPEYIILICFCALVA TKIPRVVTKLETLFLTLDAIGLVVFSILGAQIAIDQNHGFIIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAII SGAIYYSLIIWLELNALVCTLLTLFIGVIARLLAIKYQWSLPIFSYNEEK
Sequences:
>Translated_210_residues MEINALTITTLYIIGISAEGMTGALAAGRHRMDLFGVIFIALVTAIGGGSIRDVLLGHYPLTWVKHPEYIILICFCALVA TKIPRVVTKLETLFLTLDAIGLVVFSILGAQIAIDQNHGFIIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAII SGAIYYSLIIWLELNALVCTLLTLFIGVIARLLAIKYQWSLPIFSYNEEK >Mature_210_residues MEINALTITTLYIIGISAEGMTGALAAGRHRMDLFGVIFIALVTAIGGGSIRDVLLGHYPLTWVKHPEYIILICFCALVA TKIPRVVTKLETLFLTLDAIGLVVFSILGAQIAIDQNHGFIIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAII SGAIYYSLIIWLELNALVCTLLTLFIGVIARLLAIKYQWSLPIFSYNEEK
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=199, Percent_Identity=59.2964824120603, Blast_Score=221, Evalue=2e-59, Organism=Escherichia coli, GI1786352, Length=204, Percent_Identity=39.2156862745098, Blast_Score=117, Evalue=4e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 22896; Mature: 22896
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEINALTITTLYIIGISAEGMTGALAAGRHRMDLFGVIFIALVTAIGGGSIRDVLLGHYP CCCCCEEEEEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC LTWVKHPEYIILICFCALVATKIPRVVTKLETLFLTLDAIGLVVFSILGAQIAIDQNHGF EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC IIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAIISGAIYYSLIIWLELNALVCT HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTLFIGVIARLLAIKYQWSLPIFSYNEEK HHHHHHHHHHHHHHHHHEECCCEECCCCCC >Mature Secondary Structure MEINALTITTLYIIGISAEGMTGALAAGRHRMDLFGVIFIALVTAIGGGSIRDVLLGHYP CCCCCEEEEEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC LTWVKHPEYIILICFCALVATKIPRVVTKLETLFLTLDAIGLVVFSILGAQIAIDQNHGF EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC IIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAIISGAIYYSLIIWLELNALVCT HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTLFIGVIARLLAIKYQWSLPIFSYNEEK HHHHHHHHHHHHHHHHHEECCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]