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The map label for this gene is 153951154

Identifier: 153951154

GI number: 153951154

Start: 950161

End: 950811

Strand: Direct

Name: 153951154

Synonym: JJD26997_1075

Alternate gene names: NA

Gene position: 950161-950811 (Clockwise)

Preceding gene: 153952219

Following gene: 153952268

Centisome position: 51.5

GC content: 26.57

Gene sequence:

>651_bases
ATGAAAATTTTCATCTTTTTACTCGCTATATCTCTTAATATTTTCGCCTTAGAATCTTACAAACCTAGTGCTGATTTTTC
TTCTTATTTTAACAATATAAATTGCTCGCAAATCTTAGATAAGTTTTTTTATCTAAATTGCTATGATTATAAACTCAAAG
GTACAAAAGCTGTTGCTTATAAAGTAGAAGCTTTAAATTTAAAAGATAAACAAATTAAAAAACGCCCTCGCTTTGAAGAT
GATACAAATATTCCTAAAAAATACCGCACTACTTGGAGTGATTATAAAAACAGCAGCTACACACGAGGACACACTGCACC
CAATGCTTCTTTTAGCTTTAGTAAAGCTGCTCAAAATTCAGTATTTTTAATGAGTAATATTACCCCACAAAATGCTCAAA
TAAATAATACAATTTGGAATGAAATCGAACAAAGAGAAAGAAGTTTAGCTTTAAAATTTCAAAGTATTGAGGTTTTAAAT
TTAGTACTTTATGATAAAGAACCACAATACATTAAAAACCGTATTGCTATACCAAGTTTTTATATAAAAATTATTAAAAC
TCCAAAATTTAAAGAATGCTATCAAGTACCAAACCATGAAGTAAATGATGAAAATATTAAACAGTATCAAATAAATTGTA
ATAAATTTTAA

Upstream 100 bases:

>100_bases
CTATGGTTCTTTTTGGGCGCTACACCTGTAAAGCTAAAAAACCTTTATGTAAGGAATGTTTTTTAAATCATCTTTGCAAA
AGTAAAGATAAGGAACTTAA

Downstream 100 bases:

>100_bases
GGTATAAATTATGGAGATAAATGCTCTTACGATAACCACTCTTTATATCATAGGTATTTCCGCAGAAGGAATGACGGGAG
CTTTAGCTGCGGGACGCCAT

Product: DNA/RNA non-specific endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKIFIFLLAISLNIFALESYKPSADFSSYFNNINCSQILDKFFYLNCYDYKLKGTKAVAYKVEALNLKDKQIKKRPRFED
DTNIPKKYRTTWSDYKNSSYTRGHTAPNASFSFSKAAQNSVFLMSNITPQNAQINNTIWNEIEQRERSLALKFQSIEVLN
LVLYDKEPQYIKNRIAIPSFYIKIIKTPKFKECYQVPNHEVNDENIKQYQINCNKF

Sequences:

>Translated_216_residues
MKIFIFLLAISLNIFALESYKPSADFSSYFNNINCSQILDKFFYLNCYDYKLKGTKAVAYKVEALNLKDKQIKKRPRFED
DTNIPKKYRTTWSDYKNSSYTRGHTAPNASFSFSKAAQNSVFLMSNITPQNAQINNTIWNEIEQRERSLALKFQSIEVLN
LVLYDKEPQYIKNRIAIPSFYIKIIKTPKFKECYQVPNHEVNDENIKQYQINCNKF
>Mature_216_residues
MKIFIFLLAISLNIFALESYKPSADFSSYFNNINCSQILDKFFYLNCYDYKLKGTKAVAYKVEALNLKDKQIKKRPRFED
DTNIPKKYRTTWSDYKNSSYTRGHTAPNASFSFSKAAQNSVFLMSNITPQNAQINNTIWNEIEQRERSLALKFQSIEVLN
LVLYDKEPQYIKNRIAIPSFYIKIIKTPKFKECYQVPNHEVNDENIKQYQINCNKF

Specific function: Unknown

COG id: COG1864

COG function: function code F; DNA/RNA endonuclease G, NUC1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA/RNA non-specific endonuclease family [H]

Homologues:

Organism=Homo sapiens, GI53759134, Length=163, Percent_Identity=26.3803680981595, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI224451073, Length=209, Percent_Identity=26.7942583732057, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI224451075, Length=160, Percent_Identity=28.125, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17505967, Length=179, Percent_Identity=27.9329608938547, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6322253, Length=157, Percent_Identity=28.6624203821656, Blast_Score=70, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24581065, Length=176, Percent_Identity=26.1363636363636, Blast_Score=68, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018524
- InterPro:   IPR001604
- InterPro:   IPR020821 [H]

Pfam domain/function: PF01223 Endonuclease_NS [H]

EC number: NA

Molecular weight: Translated: 25447; Mature: 25447

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFIFLLAISLNIFALESYKPSADFSSYFNNINCSQILDKFFYLNCYDYKLKGTKAVAY
CEEEEEEEEHHHEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHEEEEEEEEECCCEEEEE
KVEALNLKDKQIKKRPRFEDDTNIPKKYRTTWSDYKNSSYTRGHTAPNASFSFSKAAQNS
EEEEECCCHHHHHHCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCCHHHHCCCC
VFLMSNITPQNAQINNTIWNEIEQRERSLALKFQSIEVLNLVLYDKEPQYIKNRIAIPSF
EEEEECCCCCCCEECHHHHHHHHHHHHHHHHEEEHEEEEEEEEECCCHHHHHHHCCCCCE
YIKIIKTPKFKECYQVPNHEVNDENIKQYQINCNKF
EEEEECCCCHHHHHCCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MKIFIFLLAISLNIFALESYKPSADFSSYFNNINCSQILDKFFYLNCYDYKLKGTKAVAY
CEEEEEEEEHHHEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHEEEEEEEEECCCEEEEE
KVEALNLKDKQIKKRPRFEDDTNIPKKYRTTWSDYKNSSYTRGHTAPNASFSFSKAAQNS
EEEEECCCHHHHHHCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCCHHHHCCCC
VFLMSNITPQNAQINNTIWNEIEQRERSLALKFQSIEVLNLVLYDKEPQYIKNRIAIPSF
EEEEECCCCCCCEECHHHHHHHHHHHHHHHHEEEHEEEEEEEEECCCHHHHHHHCCCCCE
YIKIIKTPKFKECYQVPNHEVNDENIKQYQINCNKF
EEEEECCCCHHHHHCCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]