| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
Click here to switch to the map view.
The map label for this gene is 153952145
Identifier: 153952145
GI number: 153952145
Start: 1033094
End: 1034290
Strand: Direct
Name: 153952145
Synonym: JJD26997_1180
Alternate gene names: NA
Gene position: 1033094-1034290 (Clockwise)
Preceding gene: 153951795
Following gene: 153950969
Centisome position: 55.99
GC content: 28.99
Gene sequence:
>1197_bases ATGGCTAGTGATGCCCTGAGCTGCGACAACATTAAAAACAATAAAACATTGCTAAATAAAAGTTTAAATTCAGATTATCT AAATATAGCTTCAAGCTGTAAAGAATCTTTAAAAAATCAAGATTTTACAAAAAAACTCTATGCAATTTCCAATGAAATTC GCGGAAGCAATAGCTCTTGTAATGGTGTGGCTTATTGGCCAAAATTACAACAATTTGATTTTTTATTATTAAAAATAGCT ATCGATCCCATCGCTTATCAAAAAACCTTAGATACGCCTGAAAATTTAGAAAAAAAATATGATATTTTAAAATCTTATTT TAGATATTGGGCATATCAAAGCATAGGAAATTTTAGATTTTACAAAGCTTTTTGGAAAGAATATAATAATGCTATAGAAC CTTTAGGAAAGTATTTTGAAAGTAATTTTAAGTTTGATAAAGGTAGTAATATTTACTATACTAGCAATGCCTTAAACGAA TTTTTAAATTGGGCTGTTGGCGAAACAAAAATTTACAAAGACATTAGTCCTTTGACAAAAATCATGTCAAGTAAAAATTA TTCAGTATCTTATATACAAGATTTTATTTTTTCAAACAATCCAAGCCAAGATGATCTTAGCATAGCCTTGCAAGCAGCGC TTCTAAATCAAAGAGAAAAAGAAATTTTAGAACTTTTGATTCGTTTTGGTGCTAGGATTGACGAAGGTTATGAAAGTGCT ATTTTTTACGCATTGGAAAATTATGAAAATACAAACTTTTTAATCCAAAATGGAGCAAATGTTAATCAAGCCAATGCCTT TGGTAAAACCCCACTTTTTTATGCCATAGAGTTTAATCGTCTTGATATTATAAAACTACTTCTTGATAATGGAGCAAATG TTAATCAAAAATATATTAATAACAATGAAAAATTAGCATTAAGCGCGAACATAGGTTCAAATACGCCTTATTTTATTACA TTTTGCGCTTTAGAGCACACTTCAAAAAATGTTTTAATGCATGCTGCAGCTTATGGAAATGTTGAAATTTTAAAACTTCT TATCTCAAAAGGAGCAAATCTTAACGCTGTTGATGATCTTGGTTTTAATGCACTTGACTTTGCGCTAACGGCAGGTAAAA AAGAAAATGCTAATTATCTAAAAAGCTTGGGTTTAAAAGCAAATGAAAATCTATTTTACGGAGGTAATTTAGAATGA
Upstream 100 bases:
>100_bases TCAAATTTAATACTTATTTGGATTAAATAACAAAATTAAAATTTTCAAAGGAAAAATATTGAAGTTATTATTCACTTCCT TTTGTTGTTTTTTAAGTTTA
Downstream 100 bases:
>100_bases AAACCGCATTTATTACAGGAGCTAGTTCAGGTTTTGGTAGAGCTTGTGTTGAAGCTTTTATACAAGAAGGCTACAAAGTA ATCGCTCTTGCTAGACGCAA
Product: ankyrin repeat-containing protein
Products: NA
Alternate protein names: Ankyrin; Ankyrin Repeat Protein; Ankyrin Repeat Domain Protein
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MASDALSCDNIKNNKTLLNKSLNSDYLNIASSCKESLKNQDFTKKLYAISNEIRGSNSSCNGVAYWPKLQQFDFLLLKIA IDPIAYQKTLDTPENLEKKYDILKSYFRYWAYQSIGNFRFYKAFWKEYNNAIEPLGKYFESNFKFDKGSNIYYTSNALNE FLNWAVGETKIYKDISPLTKIMSSKNYSVSYIQDFIFSNNPSQDDLSIALQAALLNQREKEILELLIRFGARIDEGYESA IFYALENYENTNFLIQNGANVNQANAFGKTPLFYAIEFNRLDIIKLLLDNGANVNQKYINNNEKLALSANIGSNTPYFIT FCALEHTSKNVLMHAAAYGNVEILKLLISKGANLNAVDDLGFNALDFALTAGKKENANYLKSLGLKANENLFYGGNLE
Sequences:
>Translated_398_residues MASDALSCDNIKNNKTLLNKSLNSDYLNIASSCKESLKNQDFTKKLYAISNEIRGSNSSCNGVAYWPKLQQFDFLLLKIA IDPIAYQKTLDTPENLEKKYDILKSYFRYWAYQSIGNFRFYKAFWKEYNNAIEPLGKYFESNFKFDKGSNIYYTSNALNE FLNWAVGETKIYKDISPLTKIMSSKNYSVSYIQDFIFSNNPSQDDLSIALQAALLNQREKEILELLIRFGARIDEGYESA IFYALENYENTNFLIQNGANVNQANAFGKTPLFYAIEFNRLDIIKLLLDNGANVNQKYINNNEKLALSANIGSNTPYFIT FCALEHTSKNVLMHAAAYGNVEILKLLISKGANLNAVDDLGFNALDFALTAGKKENANYLKSLGLKANENLFYGGNLE >Mature_397_residues ASDALSCDNIKNNKTLLNKSLNSDYLNIASSCKESLKNQDFTKKLYAISNEIRGSNSSCNGVAYWPKLQQFDFLLLKIAI DPIAYQKTLDTPENLEKKYDILKSYFRYWAYQSIGNFRFYKAFWKEYNNAIEPLGKYFESNFKFDKGSNIYYTSNALNEF LNWAVGETKIYKDISPLTKIMSSKNYSVSYIQDFIFSNNPSQDDLSIALQAALLNQREKEILELLIRFGARIDEGYESAI FYALENYENTNFLIQNGANVNQANAFGKTPLFYAIEFNRLDIIKLLLDNGANVNQKYINNNEKLALSANIGSNTPYFITF CALEHTSKNVLMHAAAYGNVEILKLLISKGANLNAVDDLGFNALDFALTAGKKENANYLKSLGLKANENLFYGGNLE
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI46519151, Length=190, Percent_Identity=29.4736842105263, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI46519154, Length=190, Percent_Identity=29.4736842105263, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI268607595, Length=196, Percent_Identity=28.0612244897959, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI62988328, Length=196, Percent_Identity=28.0612244897959, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI46519147, Length=190, Percent_Identity=29.4736842105263, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI37620163, Length=190, Percent_Identity=29.4736842105263, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI38683816, Length=190, Percent_Identity=29.4736842105263, Blast_Score=65, Evalue=9e-11, Organism=Homo sapiens, GI38683807, Length=190, Percent_Identity=29.4736842105263, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45157; Mature: 45026
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASDALSCDNIKNNKTLLNKSLNSDYLNIASSCKESLKNQDFTKKLYAISNEIRGSNSSC CCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC NGVAYWPKLQQFDFLLLKIAIDPIAYQKTLDTPENLEKKYDILKSYFRYWAYQSIGNFRF CCEEECCCHHHHHHEEEHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH YKAFWKEYNNAIEPLGKYFESNFKFDKGSNIYYTSNALNEFLNWAVGETKIYKDISPLTK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHH IMSSKNYSVSYIQDFIFSNNPSQDDLSIALQAALLNQREKEILELLIRFGARIDEGYESA HHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHE IFYALENYENTNFLIQNGANVNQANAFGKTPLFYAIEFNRLDIIKLLLDNGANVNQKYIN EEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCHHHCC NNEKLALSANIGSNTPYFITFCALEHTSKNVLMHAAAYGNVEILKLLISKGANLNAVDDL CCCEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHC GFNALDFALTAGKKENANYLKSLGLKANENLFYGGNLE CCCHHHHHEECCCCCCHHHHHHCCCCCCCCEEECCCCC >Mature Secondary Structure ASDALSCDNIKNNKTLLNKSLNSDYLNIASSCKESLKNQDFTKKLYAISNEIRGSNSSC CCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC NGVAYWPKLQQFDFLLLKIAIDPIAYQKTLDTPENLEKKYDILKSYFRYWAYQSIGNFRF CCEEECCCHHHHHHEEEHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH YKAFWKEYNNAIEPLGKYFESNFKFDKGSNIYYTSNALNEFLNWAVGETKIYKDISPLTK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHH IMSSKNYSVSYIQDFIFSNNPSQDDLSIALQAALLNQREKEILELLIRFGARIDEGYESA HHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHE IFYALENYENTNFLIQNGANVNQANAFGKTPLFYAIEFNRLDIIKLLLDNGANVNQKYIN EEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCHHHCC NNEKLALSANIGSNTPYFITFCALEHTSKNVLMHAAAYGNVEILKLLISKGANLNAVDDL CCCEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHC GFNALDFALTAGKKENANYLKSLGLKANENLFYGGNLE CCCHHHHHEECCCCCCHHHHHHCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA