| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is 153951389
Identifier: 153951389
GI number: 153951389
Start: 1000526
End: 1001734
Strand: Direct
Name: 153951389
Synonym: JJD26997_1144
Alternate gene names: NA
Gene position: 1000526-1001734 (Clockwise)
Preceding gene: 153952509
Following gene: 153952639
Centisome position: 54.23
GC content: 39.37
Gene sequence:
>1209_bases ATGGATAGCAAAATGAGTGAGAGCATCAAGGGTGCAAAAACGCAATTGAATTCGAAAATAGAAGAGATTAAAATAGAACA AGGGCAGAAAATAACCGAACTTGAGAACAAAATGAGTGAGTTAAACGCGCGTTTTATCACGGATGAAAATCAAATTTTGA TAAAGGTGGGAAATAATGCCGATAATGGCGAAATATCAAGCTTAAAAGAGGCGTTAAACTTAGCTTTAAAATATTCCCCT TCAATCCCTAGGAGCGTTACGAGGGAGAAAAATAGGGTTGTGATAGAAATCCAAGAGGGCTGGGAATGGGTCGAGGCAAT AGGGCTTTATCATATGGACTTAAGCCATATCATTTTAACCCAAAAGAATTTCGATGTTCCTATCATGTGTGATTTTAGTA GGCAAAATATGCATCATGATAATGGCTTACTCGTAAAGCTTTATTTGGATAATAGTAAAATAAGCATTAAAAAACTGCAC TTAAAGGCAAAGGCAAAGGAGCTGACTGAAAATAATTGCTGGTTTAATAATTATATTTATAGTCGTTTTGGAAGTGGTGT TTTCATAGAGCATTTAAAGCTTGACAGTTCTCTTTTGACAACTAGAAATTGTGGGAGTGCTGGAGACTACACTATCTTTA CAGATGATGGTTCGCAGCTTTTGGCACACAAAATTGAAATCATCAAAAGTAATGCGACGAATGAGGGCTTTGGTCTGTGT GAAAACTCAAGGGCTTATGTGGAACATCTCATCCTAAGCGGAGGGAATAGTAATTATAACGGCGTTTTAATTAATAATGC TTCAAGTGCTTTTATAGGAAATATCACTATAAACGGCAATAGCGGACACAACGGCGTGATTATCAACGCCGCTTCAAGTG CTTGTATAGCAAATATCACTATAAACGGCAATAGCGGATATAACGGTGTGATTGTGAGTGTATCAAGTGCTTATGTAGGA AATATCACTATAAGCGGGCGTTCAGGTCATCAACATCTCTTAGTCGATGGGAGTAGGCTTACGAATTACGGCTTTTGTAA CTTCACAGGCGCAACGAGCGGGAATAATCAAAAACTAGCCGTCATTAGAGGAGGCTTAGCCACCGTGGCAGGAGCGGGAT ATAGCAGAGGGGCTGGAAATGATGCCAATATCGCTGTAAATACCTGGAGCGTTCACGGGAGCTGGTGCTTTTGTGGAAAT AGGACTTAA
Upstream 100 bases:
>100_bases CTTAAATTTGGTAAACGAAGCTAAAAATACAGCTATGAGTGAAATAGGTGCCAAAGCTAATGAGTATGATATTGACAATA TTAATACACAAGTTCAAGCT
Downstream 100 bases:
>100_bases AAGAGTTTTTGGGTGAAGTTTGGAAAGTAAATTAAGGCGAAAATCAAAACGCTTTATTGAGGTGCTTATTTTAAACGCTT TCACACTCAGCAAGAGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MDSKMSESIKGAKTQLNSKIEEIKIEQGQKITELENKMSELNARFITDENQILIKVGNNADNGEISSLKEALNLALKYSP SIPRSVTREKNRVVIEIQEGWEWVEAIGLYHMDLSHIILTQKNFDVPIMCDFSRQNMHHDNGLLVKLYLDNSKISIKKLH LKAKAKELTENNCWFNNYIYSRFGSGVFIEHLKLDSSLLTTRNCGSAGDYTIFTDDGSQLLAHKIEIIKSNATNEGFGLC ENSRAYVEHLILSGGNSNYNGVLINNASSAFIGNITINGNSGHNGVIINAASSACIANITINGNSGYNGVIVSVSSAYVG NITISGRSGHQHLLVDGSRLTNYGFCNFTGATSGNNQKLAVIRGGLATVAGAGYSRGAGNDANIAVNTWSVHGSWCFCGN RT
Sequences:
>Translated_402_residues MDSKMSESIKGAKTQLNSKIEEIKIEQGQKITELENKMSELNARFITDENQILIKVGNNADNGEISSLKEALNLALKYSP SIPRSVTREKNRVVIEIQEGWEWVEAIGLYHMDLSHIILTQKNFDVPIMCDFSRQNMHHDNGLLVKLYLDNSKISIKKLH LKAKAKELTENNCWFNNYIYSRFGSGVFIEHLKLDSSLLTTRNCGSAGDYTIFTDDGSQLLAHKIEIIKSNATNEGFGLC ENSRAYVEHLILSGGNSNYNGVLINNASSAFIGNITINGNSGHNGVIINAASSACIANITINGNSGYNGVIVSVSSAYVG NITISGRSGHQHLLVDGSRLTNYGFCNFTGATSGNNQKLAVIRGGLATVAGAGYSRGAGNDANIAVNTWSVHGSWCFCGN RT >Mature_402_residues MDSKMSESIKGAKTQLNSKIEEIKIEQGQKITELENKMSELNARFITDENQILIKVGNNADNGEISSLKEALNLALKYSP SIPRSVTREKNRVVIEIQEGWEWVEAIGLYHMDLSHIILTQKNFDVPIMCDFSRQNMHHDNGLLVKLYLDNSKISIKKLH LKAKAKELTENNCWFNNYIYSRFGSGVFIEHLKLDSSLLTTRNCGSAGDYTIFTDDGSQLLAHKIEIIKSNATNEGFGLC ENSRAYVEHLILSGGNSNYNGVLINNASSAFIGNITINGNSGHNGVIINAASSACIANITINGNSGYNGVIVSVSSAYVG NITISGRSGHQHLLVDGSRLTNYGFCNFTGATSGNNQKLAVIRGGLATVAGAGYSRGAGNDANIAVNTWSVHGSWCFCGN RT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43735; Mature: 43735
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSKMSESIKGAKTQLNSKIEEIKIEQGQKITELENKMSELNARFITDENQILIKVGNNA CCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCEEEEECCCEEEEEECCCC DNGEISSLKEALNLALKYSPSIPRSVTREKNRVVIEIQEGWEWVEAIGLYHMDLSHIILT CCCHHHHHHHHHHEEEEECCCCCHHHHCCCCEEEEEECCCCHHHHHHEEEEECCEEEEEE QKNFDVPIMCDFSRQNMHHDNGLLVKLYLDNSKISIKKLHLKAKAKELTENNCWFNNYIY ECCCCCEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEEEHHHHHHCCCCCEECCCHH SRFGSGVFIEHLKLDSSLLTTRNCGSAGDYTIFTDDGSQLLAHKIEIIKSNATNEGFGLC HHCCCCEEEEEEECCCHHEEECCCCCCCCEEEEECCCHHHHHHEEEEEECCCCCCCCCEE ENSRAYVEHLILSGGNSNYNGVLINNASSAFIGNITINGNSGHNGVIINAASSACIANIT CCCHHHEEEEEEECCCCCCCEEEEECCCCEEEEEEEEECCCCCCEEEEECCCCEEEEEEE INGNSGYNGVIVSVSSAYVGNITISGRSGHQHLLVDGSRLTNYGFCNFTGATSGNNQKLA EECCCCCCEEEEEEECEEEEEEEEECCCCCEEEEEECCEECCCEEEEEECCCCCCCCEEE VIRGGLATVAGAGYSRGAGNDANIAVNTWSVHGSWCFCGNRT EEECCHHHEECCCCCCCCCCCCEEEEEEEEECCEEEEECCCC >Mature Secondary Structure MDSKMSESIKGAKTQLNSKIEEIKIEQGQKITELENKMSELNARFITDENQILIKVGNNA CCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCEEEEECCCEEEEEECCCC DNGEISSLKEALNLALKYSPSIPRSVTREKNRVVIEIQEGWEWVEAIGLYHMDLSHIILT CCCHHHHHHHHHHEEEEECCCCCHHHHCCCCEEEEEECCCCHHHHHHEEEEECCEEEEEE QKNFDVPIMCDFSRQNMHHDNGLLVKLYLDNSKISIKKLHLKAKAKELTENNCWFNNYIY ECCCCCEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEEEHHHHHHCCCCCEECCCHH SRFGSGVFIEHLKLDSSLLTTRNCGSAGDYTIFTDDGSQLLAHKIEIIKSNATNEGFGLC HHCCCCEEEEEEECCCHHEEECCCCCCCCEEEEECCCHHHHHHEEEEEECCCCCCCCCEE ENSRAYVEHLILSGGNSNYNGVLINNASSAFIGNITINGNSGHNGVIINAASSACIANIT CCCHHHEEEEEEECCCCCCCEEEEECCCCEEEEEEEEECCCCCCEEEEECCCCEEEEEEE INGNSGYNGVIVSVSSAYVGNITISGRSGHQHLLVDGSRLTNYGFCNFTGATSGNNQKLA EECCCCCCEEEEEEECEEEEEEEEECCCCCEEEEEECCEECCCEEEEEECCCCCCCCEEE VIRGGLATVAGAGYSRGAGNDANIAVNTWSVHGSWCFCGNRT EEECCHHHEECCCCCCCCCCCCEEEEEEEEECCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA