| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is 153950965
Identifier: 153950965
GI number: 153950965
Start: 933128
End: 934306
Strand: Direct
Name: 153950965
Synonym: JJD26997_1061
Alternate gene names: NA
Gene position: 933128-934306 (Clockwise)
Preceding gene: 153952452
Following gene: 153951854
Centisome position: 50.57
GC content: 29.35
Gene sequence:
>1179_bases ATGCTAGTAAATAAATTTAAAATTATCTTATTGTTTTTTATTATTTTTACTAGCTCTTATGCACAAAATTTAAATACAAA TGACACAATAGATTCCATACTCAATCAAAGCAAAAATCACTCTGCTTTAACAAGTTATGTATCAAAAAAAGATCTTAAAA ATCTAGAAAAAAAATTAGAAAAAAATCAAAACATAGGAATTAGAATTTATGGAGATTCTCATATGGCAGCTGATTTCTTT CCGCGTGTCATAAGAGGATATTTAATCCGCTCTAACTCTATAGGTTTTGCCTATCCTTTACAGCCTAAATATCAACAAAA TCTTAATCTTGTTTATTCTTATAAAAACTTTGAAATTTTAAACTCAAGAAATCCTGCTAATGCTGGACATAATTTTCCAC TAGGCGGAATAATAGCCAAAGCAAAAACCAAAGGCGCAAAAATCAACCTTGATACAACCCTAGATAAAAAAAATTTCAAA ATAGGATTTTTATTTAAAGCCAAGCAAAATACCAATGCTTTTAGCATCAAAGATGCAAAAAATCAAAGCTATGAGTTAAG AACCACGCAAATTAACAAATGGTCTTATAAAGAACTAGAACTTGATCTTCCTTTGCAAATTTCAGCCTTACAAAAGGATG CTGAACTAGGAGGATATTTCATCACAAATAAAAATAATAATGTTTTCTTAGATACCATTGCAATCAATGGTGCTAAAAGT GATTTATGGCTCTCTTGGAATCAAGCAGTTGTAAAAAAAGAACTAGAACTTTTACACAATGATTTGATTATTCTTGCCTA TGGTTCTAATGATGCACTCTTTAAAGGGTTTGAAAAACAAAAATTCAAAAACAATTTAAAAAAATGGATTAGCATTTTAA AAACTTACAATAAAAACGCTGTTATCATGCTAATCTCTCCACCAACCATAGTTCAAAAACAAGGTAAAAACTACAAGCTT GCTCCTGATTTTTTTGCCATACGCAAAGCATTATATGAAGTTGCTAAAGAAGAAAAAACTCTTATCTTTGATATGCATCA GTTTATGCAAGATAGTGGGGGAAAAAACAAATGGATAGAACAAAAGCTTTCGCTCAATGATGTACATCTTACTATAAAAG GCTATGAGCTGATGGCTAAAAAATTACTCGAGGATTTAAAAAATATCATCGATTATTAA
Upstream 100 bases:
>100_bases AGCATAAAAGTAAGAACAGATGATGGGGTTCATTTTACTCCAAGTGGCGCAAGAGAAATGTCTAAACTTTTATTAGAACA CATAAAACTTAAGGAAGAAA
Downstream 100 bases:
>100_bases ATTTAATACTTAGGAAATTCTAAGTTTTCATCATTAAAACTTAAAGCCGTGATTCGATAGTAAGAATTAATGGTTTTTAA AAGATTAAATCTAGCTCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MLVNKFKIILLFFIIFTSSYAQNLNTNDTIDSILNQSKNHSALTSYVSKKDLKNLEKKLEKNQNIGIRIYGDSHMAADFF PRVIRGYLIRSNSIGFAYPLQPKYQQNLNLVYSYKNFEILNSRNPANAGHNFPLGGIIAKAKTKGAKINLDTTLDKKNFK IGFLFKAKQNTNAFSIKDAKNQSYELRTTQINKWSYKELELDLPLQISALQKDAELGGYFITNKNNNVFLDTIAINGAKS DLWLSWNQAVVKKELELLHNDLIILAYGSNDALFKGFEKQKFKNNLKKWISILKTYNKNAVIMLISPPTIVQKQGKNYKL APDFFAIRKALYEVAKEEKTLIFDMHQFMQDSGGKNKWIEQKLSLNDVHLTIKGYELMAKKLLEDLKNIIDY
Sequences:
>Translated_392_residues MLVNKFKIILLFFIIFTSSYAQNLNTNDTIDSILNQSKNHSALTSYVSKKDLKNLEKKLEKNQNIGIRIYGDSHMAADFF PRVIRGYLIRSNSIGFAYPLQPKYQQNLNLVYSYKNFEILNSRNPANAGHNFPLGGIIAKAKTKGAKINLDTTLDKKNFK IGFLFKAKQNTNAFSIKDAKNQSYELRTTQINKWSYKELELDLPLQISALQKDAELGGYFITNKNNNVFLDTIAINGAKS DLWLSWNQAVVKKELELLHNDLIILAYGSNDALFKGFEKQKFKNNLKKWISILKTYNKNAVIMLISPPTIVQKQGKNYKL APDFFAIRKALYEVAKEEKTLIFDMHQFMQDSGGKNKWIEQKLSLNDVHLTIKGYELMAKKLLEDLKNIIDY >Mature_392_residues MLVNKFKIILLFFIIFTSSYAQNLNTNDTIDSILNQSKNHSALTSYVSKKDLKNLEKKLEKNQNIGIRIYGDSHMAADFF PRVIRGYLIRSNSIGFAYPLQPKYQQNLNLVYSYKNFEILNSRNPANAGHNFPLGGIIAKAKTKGAKINLDTTLDKKNFK IGFLFKAKQNTNAFSIKDAKNQSYELRTTQINKWSYKELELDLPLQISALQKDAELGGYFITNKNNNVFLDTIAINGAKS DLWLSWNQAVVKKELELLHNDLIILAYGSNDALFKGFEKQKFKNNLKKWISILKTYNKNAVIMLISPPTIVQKQGKNYKL APDFFAIRKALYEVAKEEKTLIFDMHQFMQDSGGKNKWIEQKLSLNDVHLTIKGYELMAKKLLEDLKNIIDY
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45050; Mature: 45050
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVNKFKIILLFFIIFTSSYAQNLNTNDTIDSILNQSKNHSALTSYVSKKDLKNLEKKLE CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH KNQNIGIRIYGDSHMAADFFPRVIRGYLIRSNSIGFAYPLQPKYQQNLNLVYSYKNFEIL CCCCCEEEEEECCCCHHHHHHHHHHHHEEECCCCCEEECCCCCHHCCCEEEEEECCEEEE NSRNPANAGHNFPLGGIIAKAKTKGAKINLDTTLDKKNFKIGFLFKAKQNTNAFSIKDAK CCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEECCC NQSYELRTTQINKWSYKELELDLPLQISALQKDAELGGYFITNKNNNVFLDTIAINGAKS CCCEEEEEEEECCCCCEEEEECCCEEEHHHHCCCCCCCEEEECCCCCEEEEEEEECCCCC DLWLSWNQAVVKKELELLHNDLIILAYGSNDALFKGFEKQKFKNNLKKWISILKTYNKNA CEEEEHHHHHHHHHHHHHHCCEEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCE VIMLISPPTIVQKQGKNYKLAPDFFAIRKALYEVAKEEKTLIFDMHQFMQDSGGKNKWIE EEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHH QKLSLNDVHLTIKGYELMAKKLLEDLKNIIDY HHCCCCEEEEEEECHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLVNKFKIILLFFIIFTSSYAQNLNTNDTIDSILNQSKNHSALTSYVSKKDLKNLEKKLE CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH KNQNIGIRIYGDSHMAADFFPRVIRGYLIRSNSIGFAYPLQPKYQQNLNLVYSYKNFEIL CCCCCEEEEEECCCCHHHHHHHHHHHHEEECCCCCEEECCCCCHHCCCEEEEEECCEEEE NSRNPANAGHNFPLGGIIAKAKTKGAKINLDTTLDKKNFKIGFLFKAKQNTNAFSIKDAK CCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEECCC NQSYELRTTQINKWSYKELELDLPLQISALQKDAELGGYFITNKNNNVFLDTIAINGAKS CCCEEEEEEEECCCCCEEEEECCCEEEHHHHCCCCCCCEEEECCCCCEEEEEEEECCCCC DLWLSWNQAVVKKELELLHNDLIILAYGSNDALFKGFEKQKFKNNLKKWISILKTYNKNA CEEEEHHHHHHHHHHHHHHCCEEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCE VIMLISPPTIVQKQGKNYKLAPDFFAIRKALYEVAKEEKTLIFDMHQFMQDSGGKNKWIE EEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHH QKLSLNDVHLTIKGYELMAKKLLEDLKNIIDY HHCCCCEEEEEEECHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA