Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
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Accession | NC_009708 |
Length | 4,723,306 |
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The map label for this gene is 153949451
Identifier: 153949451
GI number: 153949451
Start: 1979275
End: 1979607
Strand: Direct
Name: 153949451
Synonym: YpsIP31758_1708
Alternate gene names: NA
Gene position: 1979275-1979607 (Clockwise)
Preceding gene: 153949070
Following gene: 153949923
Centisome position: 41.9
GC content: 46.55
Gene sequence:
>333_bases ATGTCCGGTGGGCAGTGGTTGGTTCAGCGCCCTCTATCCAGAATAATTATGTCAGCATCAGTTTTTTCGAGGAGTAGGAT TTTGTGCATTTGTGATATTAGCGTTGAAGATGAATATGTTCGCCAACCATTATCAGCTTCTGTAGCTTGGGTGTTGGATA TGCAAGCCGCTCGCGTTCGCGGTCGTCTACGTTTTTTAAAACCGAAACGGGAAGCTCGCCCTCGTTGGCGTTTAACCCCA CTCAAAGATAGTTATGAGATTCGCTTCTATCCTAAGCGGCTCCCTGAATTATGGTTTTTCAGCGCGGAGAATGCAGCCAG AAAAAGACTCTGA
Upstream 100 bases:
>100_bases GGCTATTTTGTCCTTATTCACGGTAGGTTAGGTTGTGGAAAGTGTTGGTGATCGTAGCCGACATTATCATACAAGCACAT AGTTATGTGATGCAGATCAA
Downstream 100 bases:
>100_bases TGCTGTGCAAGGTTAATATCCTCAGAATAAAAAACTCAAATCTGTTTGGCGTTCGATCTGATAAAACGTATTCATTTAGC CAGAAAATAAAACGCCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSGGQWLVQRPLSRIIMSASVFSRSRILCICDISVEDEYVRQPLSASVAWVLDMQAARVRGRLRFLKPKREARPRWRLTP LKDSYEIRFYPKRLPELWFFSAENAARKRL
Sequences:
>Translated_110_residues MSGGQWLVQRPLSRIIMSASVFSRSRILCICDISVEDEYVRQPLSASVAWVLDMQAARVRGRLRFLKPKREARPRWRLTP LKDSYEIRFYPKRLPELWFFSAENAARKRL >Mature_109_residues SGGQWLVQRPLSRIIMSASVFSRSRILCICDISVEDEYVRQPLSASVAWVLDMQAARVRGRLRFLKPKREARPRWRLTPL KDSYEIRFYPKRLPELWFFSAENAARKRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13026; Mature: 12895
Theoretical pI: Translated: 11.58; Mature: 11.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGQWLVQRPLSRIIMSASVFSRSRILCICDISVEDEYVRQPLSASVAWVLDMQAARVR CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHH GRLRFLKPKREARPRWRLTPLKDSYEIRFYPKRLPELWFFSAENAARKRL HHHHCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCEEEECCCCHHHCCC >Mature Secondary Structure SGGQWLVQRPLSRIIMSASVFSRSRILCICDISVEDEYVRQPLSASVAWVLDMQAARVR CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHH GRLRFLKPKREARPRWRLTPLKDSYEIRFYPKRLPELWFFSAENAARKRL HHHHCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCEEEECCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA