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The map label for this gene is emtA [H]

Identifier: 153949070

GI number: 153949070

Start: 1977594

End: 1978232

Strand: Direct

Name: emtA [H]

Synonym: YpsIP31758_1706

Alternate gene names: 153949070

Gene position: 1977594-1978232 (Clockwise)

Preceding gene: 153949348

Following gene: 153949451

Centisome position: 41.87

GC content: 47.26

Gene sequence:

>639_bases
ATGGCAATTTTATTGTTGGCGGGGTGTGCTAAACAAACCCCACCACCACAAGCGAATAACGGGTGGCTGAAAAAAACGCC
ACAGGGCAATTCTCTTAACGTAGCGAAAAGCAGTGCCGGTTCAACTACCGTTGCTTATAGCGACGTCATTAAACAAGCCG
CGAGCCATTACGGCGTTGATGAAACACTGATTAAAGCGATTATCCAGGTGGAATCTGGTTACAACCCGGATGTTGTGAGT
AGATCCAATGCCGTAGGCTTGATGCAGATTAAAGCCTCTACCGCCGGGCGTGATGCGTACCGGATGAAAGGGCGAAATGG
TCAACCGAGCTCTCGTGAGCTAAAAGATCCAGTGAAGAATATTGATATTGGTGCTGCTTATATCAACATTCTACAAAATC
AGCAGTTAGCGGGGATCAACGACCCGCAGACATTACGTTATGCCACCATCGTTTCTTATGCGAATGGCGCGGGGGCTATG
TTGCGGACTTTTTCATCAGATAAACGTCTGGCAGTCAATAAAATTAATAGTCTTAGCCCAAACGAATTTTATCAGCATAT
ACAAAAGAAGCACCCGGCTGCACAGGCTCCACGTTACTTGTGGAAGGTGGATACCGCTTACCGGGCGATGTCAGAGTAA

Upstream 100 bases:

>100_bases
CTAGGCCAAAAAATCTATTTGGGCGGAGTGACAACTTGTATATGCTACAAAACGGCTTATCAGCACGGGGAATACTGTGA
ATTCAAAAGTCGGTTGCCTA

Downstream 100 bases:

>100_bases
TGCTAAAACGCTAACCGATGTAGCCTATGGATGGTGTAGCATCGGCTAGCGTTTACTTTAAATTTTACGGCAAGTTACTT
TTTTATTTTACTTTGAAATT

Product: transglycosylase slt family protein

Products: NA

Alternate protein names: Peptidoglycan lytic endotransglycosylase [H]

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MAILLLAGCAKQTPPPQANNGWLKKTPQGNSLNVAKSSAGSTTVAYSDVIKQAASHYGVDETLIKAIIQVESGYNPDVVS
RSNAVGLMQIKASTAGRDAYRMKGRNGQPSSRELKDPVKNIDIGAAYINILQNQQLAGINDPQTLRYATIVSYANGAGAM
LRTFSSDKRLAVNKINSLSPNEFYQHIQKKHPAAQAPRYLWKVDTAYRAMSE

Sequences:

>Translated_212_residues
MAILLLAGCAKQTPPPQANNGWLKKTPQGNSLNVAKSSAGSTTVAYSDVIKQAASHYGVDETLIKAIIQVESGYNPDVVS
RSNAVGLMQIKASTAGRDAYRMKGRNGQPSSRELKDPVKNIDIGAAYINILQNQQLAGINDPQTLRYATIVSYANGAGAM
LRTFSSDKRLAVNKINSLSPNEFYQHIQKKHPAAQAPRYLWKVDTAYRAMSE
>Mature_211_residues
AILLLAGCAKQTPPPQANNGWLKKTPQGNSLNVAKSSAGSTTVAYSDVIKQAASHYGVDETLIKAIIQVESGYNPDVVSR
SNAVGLMQIKASTAGRDAYRMKGRNGQPSSRELKDPVKNIDIGAAYINILQNQQLAGINDPQTLRYATIVSYANGAGAML
RTFSSDKRLAVNKINSLSPNEFYQHIQKKHPAAQAPRYLWKVDTAYRAMSE

Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. Preferentially cleaves at a distance of more than two disaccharide units from the ends of the glycan chain [H]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

Organism=Escherichia coli, GI87081855, Length=211, Percent_Identity=49.7630331753554, Blast_Score=209, Evalue=8e-56,
Organism=Escherichia coli, GI87082191, Length=164, Percent_Identity=49.390243902439, Blast_Score=173, Evalue=7e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 22994; Mature: 22863

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS00922 TRANSGLYCOSYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAILLLAGCAKQTPPPQANNGWLKKTPQGNSLNVAKSSAGSTTVAYSDVIKQAASHYGVD
CEEEEEECCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCH
ETLIKAIIQVESGYNPDVVSRSNAVGLMQIKASTAGRDAYRMKGRNGQPSSRELKDPVKN
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHH
IDIGAAYINILQNQQLAGINDPQTLRYATIVSYANGAGAMLRTFSSDKRLAVNKINSLSP
CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCEEEHHHCCCCCH
NEFYQHIQKKHPAAQAPRYLWKVDTAYRAMSE
HHHHHHHHHHCCHHHCCHHEEEHHHHHHHHCC
>Mature Secondary Structure 
AILLLAGCAKQTPPPQANNGWLKKTPQGNSLNVAKSSAGSTTVAYSDVIKQAASHYGVD
EEEEEECCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCH
ETLIKAIIQVESGYNPDVVSRSNAVGLMQIKASTAGRDAYRMKGRNGQPSSRELKDPVKN
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHH
IDIGAAYINILQNQQLAGINDPQTLRYATIVSYANGAGAMLRTFSSDKRLAVNKINSLSP
CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCEEEHHHCCCCCH
NEFYQHIQKKHPAAQAPRYLWKVDTAYRAMSE
HHHHHHHHHHCCHHHCCHHEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA