Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
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Accession | NC_009708 |
Length | 4,723,306 |
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The map label for this gene is 153948621
Identifier: 153948621
GI number: 153948621
Start: 3382647
End: 3383051
Strand: Reverse
Name: 153948621
Synonym: YpsIP31758_3001
Alternate gene names: NA
Gene position: 3383051-3382647 (Counterclockwise)
Preceding gene: 153950363
Following gene: 153947011
Centisome position: 71.62
GC content: 47.41
Gene sequence:
>405_bases ATGCCAGATATCGCTCTGACCAATCGCATTGTGAAAATTCATCTATCGAGCTGGCGTTATTTCGCCTTATTAACGCTACC ACCGCTGGTGCTGGCTTTTAATCTTTTGTACTCGTTCGCCAGCTTGGTGCTGCTAATGCTGTTTTTGGTGACGCATTACT ATTGCTGGCGTTTATGGCTGGATGAACGACTTTTCACCCTGCTGAATAAAGAAAGCAGTCTCGCTGAGTTTGATGAAGGA ATGGCCCAATTGTGGATAGCCAAGTCGGGAGCGACTCGCACGTTGACAGAGCGCTGGTGTGGGGTTAGGGGACTGTTTTA TCGGGCTATGTTCTCACTTATTGCGCTGTGGCTGACCTCATTGAGTTCCGTGCTTTATTTAATCACTATGATCTCGCGCT GTTAA
Upstream 100 bases:
>100_bases CTTGTGTCCAGGAGGCTATTGACCTTATCAAAAGCCAACGTCCGCAGGTGGTGCTGACACCTGCCCATATCCACGCACTG GAACAGTTTCAGGGAACGCT
Downstream 100 bases:
>100_bases ACCCAAGTTTTGATTCGCCACTGGTTGATGCGTTGACCGAGCTTGAGTTACTGAGACACCTGCGCCTTGAAACTGACGTG CATCCTCTGCTGTTTGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MPDIALTNRIVKIHLSSWRYFALLTLPPLVLAFNLLYSFASLVLLMLFLVTHYYCWRLWLDERLFTLLNKESSLAEFDEG MAQLWIAKSGATRTLTERWCGVRGLFYRAMFSLIALWLTSLSSVLYLITMISRC
Sequences:
>Translated_134_residues MPDIALTNRIVKIHLSSWRYFALLTLPPLVLAFNLLYSFASLVLLMLFLVTHYYCWRLWLDERLFTLLNKESSLAEFDEG MAQLWIAKSGATRTLTERWCGVRGLFYRAMFSLIALWLTSLSSVLYLITMISRC >Mature_133_residues PDIALTNRIVKIHLSSWRYFALLTLPPLVLAFNLLYSFASLVLLMLFLVTHYYCWRLWLDERLFTLLNKESSLAEFDEGM AQLWIAKSGATRTLTERWCGVRGLFYRAMFSLIALWLTSLSSVLYLITMISRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15637; Mature: 15506
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDIALTNRIVKIHLSSWRYFALLTLPPLVLAFNLLYSFASLVLLMLFLVTHYYCWRLWL CCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DERLFTLLNKESSLAEFDEGMAQLWIAKSGATRTLTERWCGVRGLFYRAMFSLIALWLTS HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSVLYLITMISRC HHHHHHHHHHHHCC >Mature Secondary Structure PDIALTNRIVKIHLSSWRYFALLTLPPLVLAFNLLYSFASLVLLMLFLVTHYYCWRLWL CCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DERLFTLLNKESSLAEFDEGMAQLWIAKSGATRTLTERWCGVRGLFYRAMFSLIALWLTS HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSVLYLITMISRC HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA