Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
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Accession | NC_009708 |
Length | 4,723,306 |
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The map label for this gene is 153947512
Identifier: 153947512
GI number: 153947512
Start: 3332365
End: 3333330
Strand: Direct
Name: 153947512
Synonym: YpsIP31758_2961
Alternate gene names: NA
Gene position: 3332365-3333330 (Clockwise)
Preceding gene: 153948592
Following gene: 153947378
Centisome position: 70.55
GC content: 38.51
Gene sequence:
>966_bases ATGAGAAACGTCGGTTTACATGCCCTAAAAACGTTGAGCTGCTTTTCCGCTGTTACGTTCTACTCTGCCAGTAAAACCTG TACTGAACAGTGCTTTTTAAGTGGGGAAGTCATGGGCGTTTTGTACTTTTTGTCGATCATTGCTACCCCGTTGTTTTTTA TGATCATTGGCTATATCGACTCAAATGACAAAATCGATCAGAAAGACATTTTCAGAAAATTAAAATCGATTATAACCATA ATTATTTTCTGGAACGTTCTCTTCTACTTTATTAATGAAGATGGTTTCAAACGGGGTTATTTCCTGCAAAGCTGGCTTCT GTTTAGTATCGCTATCATTTACCTCATAAACCCGATTATCTCCAAGATATTAAAAAGTAACAGGACAGCCATCATCACGC TCTCTTGTCTGGTTATTTTCTCCGTGACCATTGATCTGATCAGTGCCTTCAGTGAACGCCCATACCTTATTGATTTTCCA CAATACTTTAGGCTATGGACTTGGATTTTTTACTATATGACCGGCCGATTCCTCTGCTCGCGAATTTGTCAGAAGGTGAC AAAATTGCCAAAGGTTCGTCTTGCTGCCAAGTTACTGCTGCTCCCTACATCCATCTCGATGTATTATTACGAAAGTTTCA TGTCAATTTACGTGTATAAAACCGTGAATGCGAGTTACTTCCTCGATAACTTCCACGTTTTAGTCCTCAGCTTATGTCTG TTTGTTATATTTGATAACTTTGACACTCAATATGAATGGATAAAGAAAACATTGGCGTATATCAGCCCATCAATGATTGG TGTTTATATATTACATGATGGGATTTTCTACTTTATTGCCAGCGCATATAACTTATCAGATGTAACGTTGAGATTTACGC TGCTGTTATCCGTATTTGCCGCCTCAGTCTTATTGTCACGGGCCCTATTACTGAATAAATACACCTCGCGCTTTATCTCA TTCTAA
Upstream 100 bases:
>100_bases ATTCTGTCAGTGCGCGATCTTATGTCATGCATGAGGTTTAACGTAGCAGCCCTCTCACATTGCAGATCTCATTTAACCTT ATCGTAAGTCAAATTATTTT
Downstream 100 bases:
>100_bases TCGAAAAAGACCTGATTGAGATTATCTGGGAACGTGCAGATCTGATGGAAGGTTATCACTATCCACGTTAGTTGTTGTGG CGCGGGGTGATCACCTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MRNVGLHALKTLSCFSAVTFYSASKTCTEQCFLSGEVMGVLYFLSIIATPLFFMIIGYIDSNDKIDQKDIFRKLKSIITI IIFWNVLFYFINEDGFKRGYFLQSWLLFSIAIIYLINPIISKILKSNRTAIITLSCLVIFSVTIDLISAFSERPYLIDFP QYFRLWTWIFYYMTGRFLCSRICQKVTKLPKVRLAAKLLLLPTSISMYYYESFMSIYVYKTVNASYFLDNFHVLVLSLCL FVIFDNFDTQYEWIKKTLAYISPSMIGVYILHDGIFYFIASAYNLSDVTLRFTLLLSVFAASVLLSRALLLNKYTSRFIS F
Sequences:
>Translated_321_residues MRNVGLHALKTLSCFSAVTFYSASKTCTEQCFLSGEVMGVLYFLSIIATPLFFMIIGYIDSNDKIDQKDIFRKLKSIITI IIFWNVLFYFINEDGFKRGYFLQSWLLFSIAIIYLINPIISKILKSNRTAIITLSCLVIFSVTIDLISAFSERPYLIDFP QYFRLWTWIFYYMTGRFLCSRICQKVTKLPKVRLAAKLLLLPTSISMYYYESFMSIYVYKTVNASYFLDNFHVLVLSLCL FVIFDNFDTQYEWIKKTLAYISPSMIGVYILHDGIFYFIASAYNLSDVTLRFTLLLSVFAASVLLSRALLLNKYTSRFIS F >Mature_321_residues MRNVGLHALKTLSCFSAVTFYSASKTCTEQCFLSGEVMGVLYFLSIIATPLFFMIIGYIDSNDKIDQKDIFRKLKSIITI IIFWNVLFYFINEDGFKRGYFLQSWLLFSIAIIYLINPIISKILKSNRTAIITLSCLVIFSVTIDLISAFSERPYLIDFP QYFRLWTWIFYYMTGRFLCSRICQKVTKLPKVRLAAKLLLLPTSISMYYYESFMSIYVYKTVNASYFLDNFHVLVLSLCL FVIFDNFDTQYEWIKKTLAYISPSMIGVYILHDGIFYFIASAYNLSDVTLRFTLLLSVFAASVLLSRALLLNKYTSRFIS F
Specific function: Unknown
COG id: COG3274
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37375; Mature: 37375
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNVGLHALKTLSCFSAVTFYSASKTCTEQCFLSGEVMGVLYFLSIIATPLFFMIIGYID CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SNDKIDQKDIFRKLKSIITIIIFWNVLFYFINEDGFKRGYFLQSWLLFSIAIIYLINPII CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SKILKSNRTAIITLSCLVIFSVTIDLISAFSERPYLIDFPQYFRLWTWIFYYMTGRFLCS HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHH RICQKVTKLPKVRLAAKLLLLPTSISMYYYESFMSIYVYKTVNASYFLDNFHVLVLSLCL HHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHH FVIFDNFDTQYEWIKKTLAYISPSMIGVYILHDGIFYFIASAYNLSDVTLRFTLLLSVFA HHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ASVLLSRALLLNKYTSRFISF HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRNVGLHALKTLSCFSAVTFYSASKTCTEQCFLSGEVMGVLYFLSIIATPLFFMIIGYID CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SNDKIDQKDIFRKLKSIITIIIFWNVLFYFINEDGFKRGYFLQSWLLFSIAIIYLINPII CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SKILKSNRTAIITLSCLVIFSVTIDLISAFSERPYLIDFPQYFRLWTWIFYYMTGRFLCS HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHH RICQKVTKLPKVRLAAKLLLLPTSISMYYYESFMSIYVYKTVNASYFLDNFHVLVLSLCL HHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHH FVIFDNFDTQYEWIKKTLAYISPSMIGVYILHDGIFYFIASAYNLSDVTLRFTLLLSVFA HHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ASVLLSRALLLNKYTSRFISF HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA