Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
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Accession | NC_009708 |
Length | 4,723,306 |
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The map label for this gene is 153947378
Identifier: 153947378
GI number: 153947378
Start: 3333407
End: 3333604
Strand: Direct
Name: 153947378
Synonym: YpsIP31758_2962
Alternate gene names: NA
Gene position: 3333407-3333604 (Clockwise)
Preceding gene: 153947512
Following gene: 153950784
Centisome position: 70.57
GC content: 45.96
Gene sequence:
>198_bases GTGGCGCGGGGTGATCACCTGCGTATTAACATGGTATATGGCTTCGGTGTCCGTTGGTGCCATTTTCAATTTTTTGAATG TTGTTTAAAACATAAAGGTGTCGCCATGAAAACCAGCCATCAGGCAATCAGTACAGTCGTGAAGCCCGAAAGACGATTCG TAGTGGTTATGACAACCCCCCCCAAAGAAAGGCATTAA
Upstream 100 bases:
>100_bases ACCTCGCGCTTTATCTCATTCTAATCGAAAAAGACCTGATTGAGATTATCTGGGAACGTGCAGATCTGATGGAAGGTTAT CACTATCCACGTTAGTTGTT
Downstream 100 bases:
>100_bases AACTGGTTTTAAAATTGATAAGCCACCAGATGAAATGACCACGATAGAGGTTCACATCACGCAGGTGGCTTATTTAATAT CAGTGTAGACTTCAATCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MARGDHLRINMVYGFGVRWCHFQFFECCLKHKGVAMKTSHQAISTVVKPERRFVVVMTTPPKERH
Sequences:
>Translated_65_residues MARGDHLRINMVYGFGVRWCHFQFFECCLKHKGVAMKTSHQAISTVVKPERRFVVVMTTPPKERH >Mature_64_residues ARGDHLRINMVYGFGVRWCHFQFFECCLKHKGVAMKTSHQAISTVVKPERRFVVVMTTPPKERH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7631; Mature: 7500
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 10.8 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARGDHLRINMVYGFGVRWCHFQFFECCLKHKGVAMKTSHQAISTVVKPERRFVVVMTTP CCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHCCCCCCEEEEEECC PKERH CCCCC >Mature Secondary Structure ARGDHLRINMVYGFGVRWCHFQFFECCLKHKGVAMKTSHQAISTVVKPERRFVVVMTTP CCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHCCCCCCEEEEEECC PKERH CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA