Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
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Accession | NC_009708 |
Length | 4,723,306 |
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The map label for this gene is 153947421
Identifier: 153947421
GI number: 153947421
Start: 3497176
End: 3497298
Strand: Direct
Name: 153947421
Synonym: YpsIP31758_3105
Alternate gene names: NA
Gene position: 3497176-3497298 (Clockwise)
Preceding gene: 153948414
Following gene: 153946955
Centisome position: 74.04
GC content: 39.84
Gene sequence:
>123_bases ATGTCGAAAGATGGCATATTCCCCACTCCTGATAAAATAAATGGCGAGCATAATAACCGCTTTATTCCCAGAGACAAAAT TAAGCTGCTAACTATCGCACAATGCCTCTATCTTTACCGTTAG
Upstream 100 bases:
>100_bases GAAGCTCGCTGGCACATTACGAAAATCCCAACGGTTCGCCAGATCACGGGTGGCGTTTTCAACGGCGTTACGCACTTCCT GCATATCAATTTCAGAAACA
Downstream 100 bases:
>100_bases CTTTATACTTGTGGTTAACGTTTCGTTTATCGCTGACCCTGCGTTTAGTGAAAAAAAAGTCTATAATCAATGCATAACGC TTAAAAATAAGCAGTGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 39
Protein sequence:
>40_residues MSKDGIFPTPDKINGEHNNRFIPRDKIKLLTIAQCLYLYR
Sequences:
>Translated_40_residues MSKDGIFPTPDKINGEHNNRFIPRDKIKLLTIAQCLYLYR >Mature_39_residues SKDGIFPTPDKINGEHNNRFIPRDKIKLLTIAQCLYLYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4721; Mature: 4589
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDGIFPTPDKINGEHNNRFIPRDKIKLLTIAQCLYLYR CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SKDGIFPTPDKINGEHNNRFIPRDKIKLLTIAQCLYLYR CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA