Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
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Accession | NC_009708 |
Length | 4,723,306 |
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The map label for this gene is 153947177
Identifier: 153947177
GI number: 153947177
Start: 3372864
End: 3373394
Strand: Direct
Name: 153947177
Synonym: YpsIP31758_2993
Alternate gene names: NA
Gene position: 3372864-3373394 (Clockwise)
Preceding gene: 153947771
Following gene: 153948994
Centisome position: 71.41
GC content: 47.08
Gene sequence:
>531_bases ATGCTTAAGAGAAAATGGCTCAGCATCGCGGTCATTATCGTTGCCCTGATCGTGGTGAATATCTCTATTTATCAGAAGCA ACATTTGTTGGCTAAAGGTGACATCATTATTCTGGAACTGGCCCCGGTGGATCCCCGATCATTGATGCAGGGTGATTATA TGGCGCTGAGTTATGCCCTTGTAGCGCCATTCAATGAACAATTCTATGCAGAACAAGAAAAATGCAGAGAAGAGCCTTCA CTGCCTTGTCCTGAGTCCAAAAGGCGTCTAATTGTTGAACTCGACGATCGCCAGCGGGCCACCGCGGCCAGAATTGATCA GGGCGAGCCTCTGGCAGATAATCAACATTATTTGCAATACCGCTTTAAGGGCAGGTCTATTCAGATAGGAACGGATGCGT ATTTTTTCCAGGAAGGACATGCGGAAGATTACGTCAATGCACGCTACGGTGAGTTTCGTGTTGCTAAGGATGGTTCGGCG TTGTTGACCCACTTACTGGATGCCGATTTGCAGCGCATAGAGAATAAGTAA
Upstream 100 bases:
>100_bases TTGTTGTATAAATCCTTGTTATTAATCGGGTGTGGTGTCTTGCTGCTGGTTTTGGCCGCCGTATTGAATCGAGTACTCTC TGCTGGGGAGGTCAATCAAC
Downstream 100 bases:
>100_bases TTCTTAAACAATAAAAAAGAACCGTCTGGCCCCATGCCGACCCGTTATCGCGCTTATATTCACGGATGGTCTACCCCGTA TTGATGGGTATACCACCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MLKRKWLSIAVIIVALIVVNISIYQKQHLLAKGDIIILELAPVDPRSLMQGDYMALSYALVAPFNEQFYAEQEKCREEPS LPCPESKRRLIVELDDRQRATAARIDQGEPLADNQHYLQYRFKGRSIQIGTDAYFFQEGHAEDYVNARYGEFRVAKDGSA LLTHLLDADLQRIENK
Sequences:
>Translated_176_residues MLKRKWLSIAVIIVALIVVNISIYQKQHLLAKGDIIILELAPVDPRSLMQGDYMALSYALVAPFNEQFYAEQEKCREEPS LPCPESKRRLIVELDDRQRATAARIDQGEPLADNQHYLQYRFKGRSIQIGTDAYFFQEGHAEDYVNARYGEFRVAKDGSA LLTHLLDADLQRIENK >Mature_176_residues MLKRKWLSIAVIIVALIVVNISIYQKQHLLAKGDIIILELAPVDPRSLMQGDYMALSYALVAPFNEQFYAEQEKCREEPS LPCPESKRRLIVELDDRQRATAARIDQGEPLADNQHYLQYRFKGRSIQIGTDAYFFQEGHAEDYVNARYGEFRVAKDGSA LLTHLLDADLQRIENK
Specific function: Unknown
COG id: COG4929
COG function: function code S; Uncharacterized membrane-anchored protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20211; Mature: 20211
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRKWLSIAVIIVALIVVNISIYQKQHLLAKGDIIILELAPVDPRSLMQGDYMALSYAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCHHHHHCCCHHHEEEHE VAPFNEQFYAEQEKCREEPSLPCPESKRRLIVELDDRQRATAARIDQGEPLADNQHYLQY ECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCEEEEE RFKGRSIQIGTDAYFFQEGHAEDYVNARYGEFRVAKDGSALLTHLLDADLQRIENK EECCCEEEECCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLKRKWLSIAVIIVALIVVNISIYQKQHLLAKGDIIILELAPVDPRSLMQGDYMALSYAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCHHHHHCCCHHHEEEHE VAPFNEQFYAEQEKCREEPSLPCPESKRRLIVELDDRQRATAARIDQGEPLADNQHYLQY ECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCEEEEE RFKGRSIQIGTDAYFFQEGHAEDYVNARYGEFRVAKDGSALLTHLLDADLQRIENK EECCCEEEECCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA