Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
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Accession | NC_009708 |
Length | 4,723,306 |
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The map label for this gene is dipZ [H]
Identifier: 153946977
GI number: 153946977
Start: 4149430
End: 4151217
Strand: Direct
Name: dipZ [H]
Synonym: YpsIP31758_3681
Alternate gene names: 153946977
Gene position: 4149430-4151217 (Clockwise)
Preceding gene: 153950931
Following gene: 153948866
Centisome position: 87.85
GC content: 52.07
Gene sequence:
>1788_bases ATGGCTCAACGCTTCATTACTCTGATCCTGCTGCTGTGCAGCGTATTACTCGCCCCGCACAGCGCCCAGTCCTCACTCTT TGGTGAGAATACCTCTTTTGGTGCCAAAAACAGTCAGAGCCGGTTTATTCCGGTCGATCAAGCGTTCGCCTTTGATTTCC ACCAGCAAGGCGATCAGCTGAATCTGAGTTGGCAAATCCATCCCGGTTACTACCTGTATCGCCAGCAAATAAAAATTGTA CCGCAGCAAGCGGCTCTGGGAGCATTCACCCTGCCGGAAGGCATTACGCATCATGATGAGTTCTATGGTGAAGTCGAGAT TTTCAAGCAGCAGTTAACCCTGAAAATCCCCATTACTCAGGCGGCTGAACAGGCTAGCGTCAGTGTGACCTATCAGGGCT GTGCGGAAGCAGGCTTCTGTTATCCACCAGAAACGCGGGTGATCCCACTTGATGTGGTCGTTGCTGCTTCCACGGCTTCA GGCACTGCTGCCGTCAATTCGTCCGCTACCGTCAATCCACCAGCGACAACACAGCCAGAGGGCGATGCCACACCAGTACC GTCTACGTTACCCTTCTCTCCCTTGTGGGCGCTGCTAATCGGTATCGGGATTGCGTTTACCCCCTGTGTTTTACCGATGT ATCCATTGATTTCAGCCGTCATTCTTGGCCGTGAAAAACCACACAGCCAACGGCGAATACTGATATTAGCGGTGGTGTAC GTACAAGGGATGGCGCTGACCTATACCTTGCTAGGGTTAGTGGTTGCGGCGGCAGGTTTACAATTCCAGGCCGCGCTACA GCATCCTTATGTGTTGATTGGCTTGTCGGTATTATTCGTGCTGTTGGCATTATCAATGTTCGGCCTGTATTCATTGCAAT TACCTTCATCGTTACAGACCCGCCTGACACAGTGGAGTAATAGCCAACGTGGCGGCTCACTGGCCGGTGTATTTGCGATG GGTGCACTGGCGGGTCTGATTTGTTCTCCCTGCACTACCGCACCGCTGAGCGCGATCCTGCTCTATATTGCCCAAAGCGG TAATATGCTGGCCGGTGGTGGGACCTTGTACCTATATGCGCTTGGGATGGGGATCCCGCTAGTGGTTGTCACCCTGTTCG GCAACAAGCTCATTCCACGCAGCGGTCCGTGGATGCAATATGTCAAAGAGGCTTTTGGTTTTGTGATCCTGGCGCTGCCC GTGTTTTTACTGGAAAGGGTGCTGGGGGATGTCTGGGGTTTACGTTTATGGAGCCTGCTGGCCGTCGCGTTCTTTGGCTG GGCGTTTGTATTGAGCCTGAAAGCGCACGCTGGTTGGGTGCGGGTCTGCCAGTTATTGCTCTTGGCCGCACTGTTGATCG TGGCTCGCCCCTTGCAAGATTGGGCCTTTAACGGCAACACGCAGCAGAACGCAGTCAAGCATATAAACTTTCAACCAGTG GCTAATTTACCCCAATTGCAAGCCGTATTAGCGCAGGCGCAGGGTAAACCGGTGATGCTCGATCTGTATGCAGACTGGTG TGTGGCCTGTAAAGAGTTTGAGAAATACACTTTCAGTGATGATAAGGTCCAGCGCCAGTTAGCCAATACCCTGTTGCTGC AAGCGGATGTCACCGCCAACAATGCTGAACATGCCACATTATTGAAGAAATTTAACGTGTTAGGTTTACCCACTATTCTG TTTTTTGATTCTCAGGGCAACGAGATCACTGCCGCACGGGTCACCGGGTTTATGGACGCTGCGCAATTCTTACAGCATTT ACAAAACACCCCCGCGGTTACAAAATAA
Upstream 100 bases:
>100_bases ATCAGCAGGCCCTTCTCACTTATATCAAACAACATCACCCCTACCAGACGCCGGAATTACTGGTGCTACCGGTACGGGAC GGAGATAAAGATTACCTGTC
Downstream 100 bases:
>100_bases ATAGCTGTCGCCACGGCGAGTAGGTCTCGCCGTGGCATAATCAACGCTCAATCACGACAAGTCATGGTACAACTGCGGCG TCTGATAACCGTTTTTTCAA
Product: thiol:disulfide interchange protein precursor
Products: NA
Alternate protein names: Protein-disulfide reductase; Disulfide reductase [H]
Number of amino acids: Translated: 595; Mature: 594
Protein sequence:
>595_residues MAQRFITLILLLCSVLLAPHSAQSSLFGENTSFGAKNSQSRFIPVDQAFAFDFHQQGDQLNLSWQIHPGYYLYRQQIKIV PQQAALGAFTLPEGITHHDEFYGEVEIFKQQLTLKIPITQAAEQASVSVTYQGCAEAGFCYPPETRVIPLDVVVAASTAS GTAAVNSSATVNPPATTQPEGDATPVPSTLPFSPLWALLIGIGIAFTPCVLPMYPLISAVILGREKPHSQRRILILAVVY VQGMALTYTLLGLVVAAAGLQFQAALQHPYVLIGLSVLFVLLALSMFGLYSLQLPSSLQTRLTQWSNSQRGGSLAGVFAM GALAGLICSPCTTAPLSAILLYIAQSGNMLAGGGTLYLYALGMGIPLVVVTLFGNKLIPRSGPWMQYVKEAFGFVILALP VFLLERVLGDVWGLRLWSLLAVAFFGWAFVLSLKAHAGWVRVCQLLLLAALLIVARPLQDWAFNGNTQQNAVKHINFQPV ANLPQLQAVLAQAQGKPVMLDLYADWCVACKEFEKYTFSDDKVQRQLANTLLLQADVTANNAEHATLLKKFNVLGLPTIL FFDSQGNEITAARVTGFMDAAQFLQHLQNTPAVTK
Sequences:
>Translated_595_residues MAQRFITLILLLCSVLLAPHSAQSSLFGENTSFGAKNSQSRFIPVDQAFAFDFHQQGDQLNLSWQIHPGYYLYRQQIKIV PQQAALGAFTLPEGITHHDEFYGEVEIFKQQLTLKIPITQAAEQASVSVTYQGCAEAGFCYPPETRVIPLDVVVAASTAS GTAAVNSSATVNPPATTQPEGDATPVPSTLPFSPLWALLIGIGIAFTPCVLPMYPLISAVILGREKPHSQRRILILAVVY VQGMALTYTLLGLVVAAAGLQFQAALQHPYVLIGLSVLFVLLALSMFGLYSLQLPSSLQTRLTQWSNSQRGGSLAGVFAM GALAGLICSPCTTAPLSAILLYIAQSGNMLAGGGTLYLYALGMGIPLVVVTLFGNKLIPRSGPWMQYVKEAFGFVILALP VFLLERVLGDVWGLRLWSLLAVAFFGWAFVLSLKAHAGWVRVCQLLLLAALLIVARPLQDWAFNGNTQQNAVKHINFQPV ANLPQLQAVLAQAQGKPVMLDLYADWCVACKEFEKYTFSDDKVQRQLANTLLLQADVTANNAEHATLLKKFNVLGLPTIL FFDSQGNEITAARVTGFMDAAQFLQHLQNTPAVTK >Mature_594_residues AQRFITLILLLCSVLLAPHSAQSSLFGENTSFGAKNSQSRFIPVDQAFAFDFHQQGDQLNLSWQIHPGYYLYRQQIKIVP QQAALGAFTLPEGITHHDEFYGEVEIFKQQLTLKIPITQAAEQASVSVTYQGCAEAGFCYPPETRVIPLDVVVAASTASG TAAVNSSATVNPPATTQPEGDATPVPSTLPFSPLWALLIGIGIAFTPCVLPMYPLISAVILGREKPHSQRRILILAVVYV QGMALTYTLLGLVVAAAGLQFQAALQHPYVLIGLSVLFVLLALSMFGLYSLQLPSSLQTRLTQWSNSQRGGSLAGVFAMG ALAGLICSPCTTAPLSAILLYIAQSGNMLAGGGTLYLYALGMGIPLVVVTLFGNKLIPRSGPWMQYVKEAFGFVILALPV FLLERVLGDVWGLRLWSLLAVAFFGWAFVLSLKAHAGWVRVCQLLLLAALLIVARPLQDWAFNGNTQQNAVKHINFQPVA NLPQLQAVLAQAQGKPVMLDLYADWCVACKEFEKYTFSDDKVQRQLANTLLLQADVTANNAEHATLLKKFNVLGLPTILF FDSQGNEITAARVTGFMDAAQFLQHLQNTPAVTK
Specific function: Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a
COG id: COG4232
COG function: function code OC; Thiol:disulfide interchange protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1790578, Length=589, Percent_Identity=63.8370118845501, Blast_Score=753, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003834 - InterPro: IPR022910 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF02683 DsbD; PF00085 Thioredoxin [H]
EC number: =1.8.1.8 [H]
Molecular weight: Translated: 64507; Mature: 64376
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQRFITLILLLCSVLLAPHSAQSSLFGENTSFGAKNSQSRFIPVDQAFAFDFHQQGDQL CHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCEE NLSWQIHPGYYLYRQQIKIVPQQAALGAFTLPEGITHHDEFYGEVEIFKQQLTLKIPITQ EEEEEECCCCCEEEHHHHCCCHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHEEEECCHH AAEQASVSVTYQGCAEAGFCYPPETRVIPLDVVVAASTASGTAAVNSSATVNPPATTQPE HHCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCC GDATPVPSTLPFSPLWALLIGIGIAFTPCVLPMYPLISAVILGREKPHSQRRILILAVVY CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH VQGMALTYTLLGLVVAAAGLQFQAALQHPYVLIGLSVLFVLLALSMFGLYSLQLPSSLQT HHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RLTQWSNSQRGGSLAGVFAMGALAGLICSPCTTAPLSAILLYIAQSGNMLAGGGTLYLYA HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCEEEEHH LGMGIPLVVVTLFGNKLIPRSGPWMQYVKEAFGFVILALPVFLLERVLGDVWGLRLWSLL HHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAFFGWAFVLSLKAHAGWVRVCQLLLLAALLIVARPLQDWAFNGNTQQNAVKHINFQPV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHCCCCCCC ANLPQLQAVLAQAQGKPVMLDLYADWCVACKEFEKYTFSDDKVQRQLANTLLLQADVTAN CCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEECCCCC NAEHATLLKKFNVLGLPTILFFDSQGNEITAARVTGFMDAAQFLQHLQNTPAVTK CCHHHHHHHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AQRFITLILLLCSVLLAPHSAQSSLFGENTSFGAKNSQSRFIPVDQAFAFDFHQQGDQL HHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCEE NLSWQIHPGYYLYRQQIKIVPQQAALGAFTLPEGITHHDEFYGEVEIFKQQLTLKIPITQ EEEEEECCCCCEEEHHHHCCCHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHEEEECCHH AAEQASVSVTYQGCAEAGFCYPPETRVIPLDVVVAASTASGTAAVNSSATVNPPATTQPE HHCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCC GDATPVPSTLPFSPLWALLIGIGIAFTPCVLPMYPLISAVILGREKPHSQRRILILAVVY CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH VQGMALTYTLLGLVVAAAGLQFQAALQHPYVLIGLSVLFVLLALSMFGLYSLQLPSSLQT HHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RLTQWSNSQRGGSLAGVFAMGALAGLICSPCTTAPLSAILLYIAQSGNMLAGGGTLYLYA HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCEEEEHH LGMGIPLVVVTLFGNKLIPRSGPWMQYVKEAFGFVILALPVFLLERVLGDVWGLRLWSLL HHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAFFGWAFVLSLKAHAGWVRVCQLLLLAALLIVARPLQDWAFNGNTQQNAVKHINFQPV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHCCCCCCC ANLPQLQAVLAQAQGKPVMLDLYADWCVACKEFEKYTFSDDKVQRQLANTLLLQADVTAN CCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEECCCCC NAEHATLLKKFNVLGLPTILFFDSQGNEITAARVTGFMDAAQFLQHLQNTPAVTK CCHHHHHHHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA