| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is hisD [H]
Identifier: 153936583
GI number: 153936583
Start: 1669580
End: 1670884
Strand: Direct
Name: hisD [H]
Synonym: CLC_1598
Alternate gene names: 153936583
Gene position: 1669580-1670884 (Clockwise)
Preceding gene: 153934487
Following gene: 153935645
Centisome position: 44.4
GC content: 32.03
Gene sequence:
>1305_bases ATGATAAATGTGGTTAAAATAGGTGAAGACAATAAAAAACAGTGCATGAATAATTTGAAAAGCAGGTCAAAAAAAGTACA AAAAGATGTAATTACTTCTGTAAAAAAAATACTAGGGGACATAAATGAAGATGGGGATAAAGCATTAATAAAATATACTA ATAAGTTTGATAGTAAAAAAATAAATTTAGAAAATATTAGAGTTACTTCAGAAGAGATAAAAAAGGCTTATGAATTAGTT GATGAAAAATTTATAAAGGCTATAAAAATTGCTAAAGAAAATATATTGTTTTATCATGAGAAGCAAAAACAAAGATCATG GATGGTAACAAAGGAAGATGGAATAATTTTAGGTCAGCAAATTAGAGCTCTAGAGACTGTAGGTATATACGTTCCAGGAG GAACAGCAGCTTATCCTTCTTCAGTATTAATGAACACCCTTCCAGCTAAAGTAGCAGGAGTAGAAAAAATAGTTATGATA ACTCCTCCTTCTAAGGATGGGAGTGTAAATCCTAATATTTTAGTAGCTGCTAATATTGCAGGGGTTGATGAAATATATAA AGCAGGAGGAGCACAAGGAATAGGAGCTTTAGCTTATGGAACAAAAATCATACCAAAGGTGGATAAAATAGTAGGTCCAG GTAATATATATGTGGCTATGGCCAAAAGAAGTGTTTATGGCTTTGTGGATATAGATATGATAGCAGGACCTAGTGAAATT TTGATTATAGCAGATGAAAGTTCTGATCCTAAATTTATAGCAGCAGATTTTATGTCTCAAGCTGAGCATGATGTATTGGC ATCCTCAATGTTAGTTACTACCTCTGAGAGATTAGCACAAAAGGTAAAAGACCAATTAAACATACAGATAAAAAATCTTT CAAGGAAAGAAATAATACGTACATCTATTAAAGATTATGGTGCTATTTTTGTAGTAGATAATTTAGAAGAAGCTATAGAA CTTGCTAATGATATATCCCCAGAACATTTAGAGGTTATGACAGAAGACCCCTTCACTATTTTAGGACAAATTAAAAATGC AGGTTCTGTATTCTTAGGTAAATATGCTCCAGAACCATTAGGGGATTATATGGCAGGACCAAATCATGTATTGCCTACTA GCGGAAGTGCAAGATTTTTTTCACCTCTTTCAGTAGATGATTATATTAAGAAATCAAGTTTCACATATTACACCAAAAGG GCATTGGAAAAAGTAAAGGATGTTACTGTAACCATTGCTGAAACAGAGGGATTAACTGCCCATGCAAATTCCATAAGAGT GAGATTTGATAATAATAATTTTTGA
Upstream 100 bases:
>100_bases TAAGTGAGGTAATAAGGCAATAAAAAAGAACAAAAATAGGAAAGGGGGGTATTTAGTGAGTTAATGTATTTTTTATATAC TCTCTCACTAAAGTTAAAAA
Downstream 100 bases:
>100_bases TTTTAGGAAGATGTTAAGTTTAAATTGAAGATTTAAAAGTGGTAATTAATAGATAAATAGTAGTTTAATATGTTTCCTAT AAAAATACAATTGGAACAGT
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MINVVKIGEDNKKQCMNNLKSRSKKVQKDVITSVKKILGDINEDGDKALIKYTNKFDSKKINLENIRVTSEEIKKAYELV DEKFIKAIKIAKENILFYHEKQKQRSWMVTKEDGIILGQQIRALETVGIYVPGGTAAYPSSVLMNTLPAKVAGVEKIVMI TPPSKDGSVNPNILVAANIAGVDEIYKAGGAQGIGALAYGTKIIPKVDKIVGPGNIYVAMAKRSVYGFVDIDMIAGPSEI LIIADESSDPKFIAADFMSQAEHDVLASSMLVTTSERLAQKVKDQLNIQIKNLSRKEIIRTSIKDYGAIFVVDNLEEAIE LANDISPEHLEVMTEDPFTILGQIKNAGSVFLGKYAPEPLGDYMAGPNHVLPTSGSARFFSPLSVDDYIKKSSFTYYTKR ALEKVKDVTVTIAETEGLTAHANSIRVRFDNNNF
Sequences:
>Translated_434_residues MINVVKIGEDNKKQCMNNLKSRSKKVQKDVITSVKKILGDINEDGDKALIKYTNKFDSKKINLENIRVTSEEIKKAYELV DEKFIKAIKIAKENILFYHEKQKQRSWMVTKEDGIILGQQIRALETVGIYVPGGTAAYPSSVLMNTLPAKVAGVEKIVMI TPPSKDGSVNPNILVAANIAGVDEIYKAGGAQGIGALAYGTKIIPKVDKIVGPGNIYVAMAKRSVYGFVDIDMIAGPSEI LIIADESSDPKFIAADFMSQAEHDVLASSMLVTTSERLAQKVKDQLNIQIKNLSRKEIIRTSIKDYGAIFVVDNLEEAIE LANDISPEHLEVMTEDPFTILGQIKNAGSVFLGKYAPEPLGDYMAGPNHVLPTSGSARFFSPLSVDDYIKKSSFTYYTKR ALEKVKDVTVTIAETEGLTAHANSIRVRFDNNNF >Mature_434_residues MINVVKIGEDNKKQCMNNLKSRSKKVQKDVITSVKKILGDINEDGDKALIKYTNKFDSKKINLENIRVTSEEIKKAYELV DEKFIKAIKIAKENILFYHEKQKQRSWMVTKEDGIILGQQIRALETVGIYVPGGTAAYPSSVLMNTLPAKVAGVEKIVMI TPPSKDGSVNPNILVAANIAGVDEIYKAGGAQGIGALAYGTKIIPKVDKIVGPGNIYVAMAKRSVYGFVDIDMIAGPSEI LIIADESSDPKFIAADFMSQAEHDVLASSMLVTTSERLAQKVKDQLNIQIKNLSRKEIIRTSIKDYGAIFVVDNLEEAIE LANDISPEHLEVMTEDPFTILGQIKNAGSVFLGKYAPEPLGDYMAGPNHVLPTSGSARFFSPLSVDDYIKKSSFTYYTKR ALEKVKDVTVTIAETEGLTAHANSIRVRFDNNNF
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=426, Percent_Identity=37.0892018779343, Blast_Score=293, Evalue=1e-80, Organism=Saccharomyces cerevisiae, GI6319819, Length=420, Percent_Identity=37.6190476190476, Blast_Score=283, Evalue=4e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 47757; Mature: 47757
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINVVKIGEDNKKQCMNNLKSRSKKVQKDVITSVKKILGDINEDGDKALIKYTNKFDSKK CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCE INLENIRVTSEEIKKAYELVDEKFIKAIKIAKENILFYHEKQKQRSWMVTKEDGIILGQQ EEHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEECCCCEEEHHH IRALETVGIYVPGGTAAYPSSVLMNTLPAKVAGVEKIVMITPPSKDGSVNPNILVAANIA HHEEEEEEEEECCCCCCCCHHHHHHHCCHHHCCCEEEEEEECCCCCCCCCCCEEEEEECC GVDEIYKAGGAQGIGALAYGTKIIPKVDKIVGPGNIYVAMAKRSVYGFVDIDMIAGPSEI CHHHHHHCCCCCCCCHHHHCCCCCCCHHHHCCCCCEEEEEECCCEEEEEEEEEECCCCEE LIIADESSDPKFIAADFMSQAEHDVLASSMLVTTSERLAQKVKDQLNIQIKNLSRKEIIR EEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHH TSIKDYGAIFVVDNLEEAIELANDISPEHLEVMTEDPFTILGQIKNAGSVFLGKYAPEPL HHHHHCCEEEEECCHHHHHHHHHCCCCCCEEEECCCCCEEHHHHCCCCCEEEECCCCCCH GDYMAGPNHVLPTSGSARFFSPLSVDDYIKKSSFTYYTKRALEKVKDVTVTIAETEGLTA HHHCCCCCCCCCCCCCCCEECCCCHHHHHHHCCCHHHHHHHHHHHHCEEEEEEECCCCEE HANSIRVRFDNNNF ECCEEEEEECCCCC >Mature Secondary Structure MINVVKIGEDNKKQCMNNLKSRSKKVQKDVITSVKKILGDINEDGDKALIKYTNKFDSKK CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCE INLENIRVTSEEIKKAYELVDEKFIKAIKIAKENILFYHEKQKQRSWMVTKEDGIILGQQ EEHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEECCCCEEEHHH IRALETVGIYVPGGTAAYPSSVLMNTLPAKVAGVEKIVMITPPSKDGSVNPNILVAANIA HHEEEEEEEEECCCCCCCCHHHHHHHCCHHHCCCEEEEEEECCCCCCCCCCCEEEEEECC GVDEIYKAGGAQGIGALAYGTKIIPKVDKIVGPGNIYVAMAKRSVYGFVDIDMIAGPSEI CHHHHHHCCCCCCCCHHHHCCCCCCCHHHHCCCCCEEEEEECCCEEEEEEEEEECCCCEE LIIADESSDPKFIAADFMSQAEHDVLASSMLVTTSERLAQKVKDQLNIQIKNLSRKEIIR EEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHH TSIKDYGAIFVVDNLEEAIELANDISPEHLEVMTEDPFTILGQIKNAGSVFLGKYAPEPL HHHHHCCEEEEECCHHHHHHHHHCCCCCCEEEECCCCCEEHHHHCCCCCEEEECCCCCCH GDYMAGPNHVLPTSGSARFFSPLSVDDYIKKSSFTYYTKRALEKVKDVTVTIAETEGLTA HHHCCCCCCCCCCCCCCCEECCCCHHHHHHHCCCHHHHHHHHHHHHCEEEEEEECCCCEE HANSIRVRFDNNNF ECCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]