Definition | Clostridium botulinum A str. Hall, complete genome. |
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Accession | NC_009698 |
Length | 3,760,560 |
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The map label for this gene is 153935095
Identifier: 153935095
GI number: 153935095
Start: 1130888
End: 1131763
Strand: Reverse
Name: 153935095
Synonym: CLC_1106
Alternate gene names: NA
Gene position: 1131763-1130888 (Counterclockwise)
Preceding gene: 153935818
Following gene: 153936493
Centisome position: 30.1
GC content: 25.68
Gene sequence:
>876_bases ATGAATATATCTTTTTCACCCAAACATCAGATGGGTTCAATAAATTTAAATTATCCATCTAATGCTAAAACTTTTGTTAA CAATAGAAACTCTCAAAAACAGGATCTTATTAATAGAGGAAATAAGATCACCTGCTTTAAAGGAAATTCAGGGAAAAATA ATGTATTAAAAAATCTAATGGAACAAAAATCTAATTTGATGGAAATGAAAAATTCTATTATGGAAAGAGGATTAAAAAAA GATAATGATCCTTTAACTATAAAAGAAAAGCTTGAAAGTATTGATAAACAAATTAAAGAAATTGATAAACAAATTAATGA TCTTCAATTAGAAGAACAACGTAATTCAATGGGCATTGAAAGTAAAGATAAAGATAAAAATAAGAAAAACCAAAACTCTA AGAAAACATCAAATACATATTCAGAAAAGGATATGAAAACAGATGAATCTATGGACAATCTTTTAAGTCTTTCTACCAAT CTATCACAAGCTAAATCATTATCCTCTCAAAAAACTTTAATATCCGGTAGGGCAAGAGTTTTAGACTGCGAAATAAAAAC AGATGAAAAAAGAGGACTAGACCCTGTTAATAAAAAAGAGCAACTTGATAAAATAAAAAATGGGCTTGAAAATATTGATA AAGAACTAGGTAAAAACTTAAAAAATATAAACAATAATAATACAGAAAATAACACTTCTAATAATATGGTTAATAATAAT GAACAAAGTAAAGATGTAAATTCGAGTTCAGTCTCAAAAAGCTCAAATGAATTAGCTATAAGGCGACAACAAATTGTACA AAATATTAAGCATTATGAGGACAACCTTCCTAATAAAGCTAAAGATAATAAAGAACAAATTAATATAATCGCTTAA
Upstream 100 bases:
>100_bases CTTGTTGCTACAAACTAATGAAATTAATTCCATATTCTACGATATAATAAGTGTAAAAACCATACAAAACTTCAAAAATT CTATTAAAGGAGGCATATTT
Downstream 100 bases:
>100_bases AACTCATTTTATTACCATCTAGTTTTAGCCTATAAAATTTTATTTATAGACTTAGTTAGATGGTATACTTACTTTGGAGG TGATTCAATGCTAAAGTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MNISFSPKHQMGSINLNYPSNAKTFVNNRNSQKQDLINRGNKITCFKGNSGKNNVLKNLMEQKSNLMEMKNSIMERGLKK DNDPLTIKEKLESIDKQIKEIDKQINDLQLEEQRNSMGIESKDKDKNKKNQNSKKTSNTYSEKDMKTDESMDNLLSLSTN LSQAKSLSSQKTLISGRARVLDCEIKTDEKRGLDPVNKKEQLDKIKNGLENIDKELGKNLKNINNNNTENNTSNNMVNNN EQSKDVNSSSVSKSSNELAIRRQQIVQNIKHYEDNLPNKAKDNKEQINIIA
Sequences:
>Translated_291_residues MNISFSPKHQMGSINLNYPSNAKTFVNNRNSQKQDLINRGNKITCFKGNSGKNNVLKNLMEQKSNLMEMKNSIMERGLKK DNDPLTIKEKLESIDKQIKEIDKQINDLQLEEQRNSMGIESKDKDKNKKNQNSKKTSNTYSEKDMKTDESMDNLLSLSTN LSQAKSLSSQKTLISGRARVLDCEIKTDEKRGLDPVNKKEQLDKIKNGLENIDKELGKNLKNINNNNTENNTSNNMVNNN EQSKDVNSSSVSKSSNELAIRRQQIVQNIKHYEDNLPNKAKDNKEQINIIA >Mature_291_residues MNISFSPKHQMGSINLNYPSNAKTFVNNRNSQKQDLINRGNKITCFKGNSGKNNVLKNLMEQKSNLMEMKNSIMERGLKK DNDPLTIKEKLESIDKQIKEIDKQINDLQLEEQRNSMGIESKDKDKNKKNQNSKKTSNTYSEKDMKTDESMDNLLSLSTN LSQAKSLSSQKTLISGRARVLDCEIKTDEKRGLDPVNKKEQLDKIKNGLENIDKELGKNLKNINNNNTENNTSNNMVNNN EQSKDVNSSSVSKSSNELAIRRQQIVQNIKHYEDNLPNKAKDNKEQINIIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33176; Mature: 33176
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISFSPKHQMGSINLNYPSNAKTFVNNRNSQKQDLINRGNKITCFKGNSGKNNVLKNLM CCCCCCCCCCCCEEEECCCCCCHHHHCCCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHH EQKSNLMEMKNSIMERGLKKDNDPLTIKEKLESIDKQIKEIDKQINDLQLEEQRNSMGIE HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SKDKDKNKKNQNSKKTSNTYSEKDMKTDESMDNLLSLSTNLSQAKSLSSQKTLISGRARV CCCCHHHHHCCCCHHHCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEE LDCEIKTDEKRGLDPVNKKEQLDKIKNGLENIDKELGKNLKNINNNNTENNTSNNMVNNN EEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC EQSKDVNSSSVSKSSNELAIRRQQIVQNIKHYEDNLPNKAKDNKEQINIIA CHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECC >Mature Secondary Structure MNISFSPKHQMGSINLNYPSNAKTFVNNRNSQKQDLINRGNKITCFKGNSGKNNVLKNLM CCCCCCCCCCCCEEEECCCCCCHHHHCCCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHH EQKSNLMEMKNSIMERGLKKDNDPLTIKEKLESIDKQIKEIDKQINDLQLEEQRNSMGIE HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SKDKDKNKKNQNSKKTSNTYSEKDMKTDESMDNLLSLSTNLSQAKSLSSQKTLISGRARV CCCCHHHHHCCCCHHHCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEE LDCEIKTDEKRGLDPVNKKEQLDKIKNGLENIDKELGKNLKNINNNNTENNTSNNMVNNN EEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC EQSKDVNSSSVSKSSNELAIRRQQIVQNIKHYEDNLPNKAKDNKEQINIIA CHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA