| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is phoU [H]
Identifier: 153933449
GI number: 153933449
Start: 2533299
End: 2533952
Strand: Reverse
Name: phoU [H]
Synonym: CLB_2398
Alternate gene names: 153933449
Gene position: 2533952-2533299 (Counterclockwise)
Preceding gene: 153932674
Following gene: 153931168
Centisome position: 65.59
GC content: 27.37
Gene sequence:
>654_bases TTGAGAAAGGTATTTGATGAGGAACTTCTAAAACTCCACAATAGTATATTAAGAATGGGTAGTATTGTAGAAAAACAAAT AAACACATGTATTAAGGCATTAGTAGAAAAAGATGAAAAATTAGCAGATGAAGTGATAAAAAATGATGATGTAGTAGATG ATTTAGAAAAAGAAATAGAAGATGAATGTATAGTTCTTATAGCAAAAGAACAACCTTTAGCTACAGATTTAAGAAAAATA TTTACTACACTAAAAATTGTTACAGACTTAGAAAGAATGGCAGATCATGCAGTGGATATAGCTAAAATAGCAAAAAAAAT AAAAGATGAAAAATATGTTAAGTCTTTGATAAAAATACCTAGAATGGCAGATCTAGTTCAAAATATGATAAAAGAATCTT TGGATTCTTATGTGAATGAAAACAAAGAAGGAGCCTATAAAGCTTGTACTTTAGATGATGAAATAGATCATATCTATAAA ACTACCTTTAAAGAATCTATAGATACGATGATAGAGAGAAAAGAAAGTATAAATCAACTCACACAATTTTTATTCGTATG CAAATATCTAGAAAGAATAGCAGATCACGCCACTAACATATGTGAATGGACTATTTATTTAATAACAGGAGAGCATATTG ATATGAATGAATAA
Upstream 100 bases:
>100_bases AAACTGGAGAATTATTTTATAAACCAAAAGATAAAAGGACAGAGGATTATATAACAGGTAGATTTGGCTAGAACTAGTTA AATGAAAGGGGAAGAATAGA
Downstream 100 bases:
>100_bases AATTCTTAAGTAATAATATAAAAAATATTAGGTTATTTTTTAAGAATAACATATAATGAAATCATTATATTAAAAAATTA GGAGAATTTATTTAAAAATA
Product: phosphate transport system regulatory protein PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MRKVFDEELLKLHNSILRMGSIVEKQINTCIKALVEKDEKLADEVIKNDDVVDDLEKEIEDECIVLIAKEQPLATDLRKI FTTLKIVTDLERMADHAVDIAKIAKKIKDEKYVKSLIKIPRMADLVQNMIKESLDSYVNENKEGAYKACTLDDEIDHIYK TTFKESIDTMIERKESINQLTQFLFVCKYLERIADHATNICEWTIYLITGEHIDMNE
Sequences:
>Translated_217_residues MRKVFDEELLKLHNSILRMGSIVEKQINTCIKALVEKDEKLADEVIKNDDVVDDLEKEIEDECIVLIAKEQPLATDLRKI FTTLKIVTDLERMADHAVDIAKIAKKIKDEKYVKSLIKIPRMADLVQNMIKESLDSYVNENKEGAYKACTLDDEIDHIYK TTFKESIDTMIERKESINQLTQFLFVCKYLERIADHATNICEWTIYLITGEHIDMNE >Mature_217_residues MRKVFDEELLKLHNSILRMGSIVEKQINTCIKALVEKDEKLADEVIKNDDVVDDLEKEIEDECIVLIAKEQPLATDLRKI FTTLKIVTDLERMADHAVDIAKIAKKIKDEKYVKSLIKIPRMADLVQNMIKESLDSYVNENKEGAYKACTLDDEIDHIYK TTFKESIDTMIERKESINQLTQFLFVCKYLERIADHATNICEWTIYLITGEHIDMNE
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=216, Percent_Identity=28.7037037037037, Blast_Score=110, Evalue=9e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 25227; Mature: 25227
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVFDEELLKLHNSILRMGSIVEKQINTCIKALVEKDEKLADEVIKNDDVVDDLEKEIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH DECIVLIAKEQPLATDLRKIFTTLKIVTDLERMADHAVDIAKIAKKIKDEKYVKSLIKIP HHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RMADLVQNMIKESLDSYVNENKEGAYKACTLDDEIDHIYKTTFKESIDTMIERKESINQL HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQFLFVCKYLERIADHATNICEWTIYLITGEHIDMNE HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCC >Mature Secondary Structure MRKVFDEELLKLHNSILRMGSIVEKQINTCIKALVEKDEKLADEVIKNDDVVDDLEKEIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH DECIVLIAKEQPLATDLRKIFTTLKIVTDLERMADHAVDIAKIAKKIKDEKYVKSLIKIP HHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RMADLVQNMIKESLDSYVNENKEGAYKACTLDDEIDHIYKTTFKESIDTMIERKESINQL HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQFLFVCKYLERIADHATNICEWTIYLITGEHIDMNE HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10629178 [H]